New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1590765 =53 (0.970)462 (8.760) 141/286 0.0 90.9% intergenic (‑229/+89) yneL/hipA pseudogene, AraC family/inactivating GltX kinase facilitating persister formation; toxin of HipAB TA pair; autokinase
?NC_000913 = 1647024 41 (0.780)intergenic (+287/+150) flxA/intK Qin prophage; uncharacterized protein/pseudogene, integrase fragment, Qin prophage;Phage or Prophage Related

Only 100 of 486 total aligned reads displayed.

ACGGCAGTTGAAAGCAATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1590919‑1590765
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taatgAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTCAGTTAAACTCGTGGCGATT  <  NC_000913/1647024‑1646877
                                                                                                                                                                                                                                                                                                               
ACGGCAGTTGAAAGCAATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCAT                                                                                                                                                          <  2:284630/151‑1
    CAGTTGAAAGCAATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAAT                                                                                                                                                       <  2:439197/150‑1
      GTTGAAAGCAATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAG                                                                                                                                                    >  1:125826/1‑151
      GTTGAAAGCAATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAG                                                                                                                                                    >  2:544440/1‑151
       TTGAAAGCAATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGA                                                                                                                                                     <  1:319193/149‑1
       TTGAAAGCAATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATG                                                                                                                                                      <  2:183471/148‑1
       TTGAAAGCAATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATG                                                                                                                                                      <  1:289499/148‑1
          AAAGCAATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCG                                                                                                                                                 <  1:36067/150‑1
             GCAATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTAT                                                                                                                                             >  2:578150/1‑151
              CAATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTAT                                                                                                                                             <  2:665489/150‑1
               AATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGG                                                                                                                                           <  2:693777/151‑1
               AATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGG                                                                                                                                           <  2:599401/151‑1
                ATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAAT                                                                                                                                                       <  1:488121/138‑1
                 TGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTA                                                                                                                                         <  2:490259/151‑1
                  GTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAA                                                                                                                                        >  1:253914/1‑151
                  GTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAA                                                                                                                                        >  1:398816/1‑151
                    GTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAAT                                                                                                                                      >  2:453317/1‑151
                     TTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAAT                                                                                                                                      <  2:620528/150‑1
                     TTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAAT                                                                                                                                      <  1:342955/150‑1
                     TTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAAT                                                                                                                                      <  1:89682/150‑1
                       GAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAG                                                                                                                                    >  2:39044/1‑150
                        AGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGC                                                                                                                                   >  2:554459/1‑150
                        AGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGC                                                                                                                                   <  2:712051/150‑1
                         GGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGC                                                                                                                                   >  1:164484/1‑149
                         GGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGC                                                                                                                                   >  1:533282/1‑149
                          GTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCC                                                                                                                                  <  1:108447/149‑1
                          GTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCC                                                                                                                                  <  2:65602/149‑1
                              CATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCT                                                                                                                            <  2:757547/151‑1
                              CATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGC                                                                                                                             <  2:813387/150‑1
                              CATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGC                                                                                                                             <  1:81197/150‑1
                              CATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGC                                                                                                                             <  1:509782/150‑1
                              CATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGC                                                                                                                             <  1:307338/150‑1
                              CATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCATTATGGTAAATAGCCTATGCT                                                                                                                            <  2:368621/151‑1
                                   ACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATG                                                                                                                        <  1:407540/150‑1
                                   ACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATG                                                                                                                        <  1:198649/150‑1
                                    CGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTC                                                                                                                      <  1:464611/151‑1
                                      GTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCG                                                                                                                    >  1:142487/1‑151
                                      GTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCG                                                                                                                    >  2:635255/1‑151
                                      GTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCG                                                                                                                    >  2:507279/1‑151
                                           GCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGTATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAG                                                                                                               >  1:180428/1‑151
                                           GCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAG                                                                                                               >  2:801467/1‑151
                                            CCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAG                                                                                                               <  1:363328/150‑1
                                               AGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGC                                                                                                            <  1:100367/150‑1
                                                 AATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCA                                                                                                           <  2:142487/149‑1
                                                   TACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAA                                                                                                       <  2:244864/151‑1
                                                    ACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAG                                                                                                      <  2:722886/151‑1
                                                     CGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAG                                                                                                      >  2:770677/1‑150
                                                       GTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGG                                                                                                   >  1:372472/1‑151
                                                       GTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGG                                                                                                   >  1:672584/1‑151
                                                        TAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACCGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGA                                                                                                  >  2:300762/1‑151
                                                           TAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAG                                                                                                <  1:598139/150‑1
                                                              GTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGG                                                                                            >  1:264312/1‑151
                                                                GAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCA                                                                                          >  2:105817/1‑151
                                                                    TATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTT                                                                                      <  2:674072/151‑1
                                                                      TGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTG                                                                                    <  1:4456/151‑1
                                                                        GGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTG                                                                                  >  2:340718/1‑151
                                                                          GTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGG                                                                                 <  2:129007/150‑1
                                                                           TTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGAC                                                                               <  1:658060/151‑1
                                                                           TTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGAC                                                                               <  1:236368/151‑1
                                                                           TTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGAC                                                                               <  1:716281/151‑1
                                                                           TTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGAC                                                                               <  2:319809/151‑1
                                                                           TTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTGGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGGGGAC                                                                               <  1:93283/151‑1
                                                                                   TTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCA                                                                       >  1:586395/1‑151
                                                                                      TTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACA                                                                     <  1:273951/150‑1
                                                                                       TAATGAGCATGACAATCATGACCGCCAACGACTGGAGTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAA                                                                   <  1:78724/151‑1
                                                                                              CATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACT                                                            <  2:360197/151‑1
                                                                                                TGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATG                                                                                                                        >  1:724499/1‑89
                                                                                                     ATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAA                                                     <  2:20368/151‑1
                                                                                                         TGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGT                                                 <  2:52790/151‑1
                                                                                                           ACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTG                                               <  2:261415/151‑1
                                                                                                            CCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTG                                               >  1:547908/1‑150
                                                                                                               CCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAAT                                           >  1:496410/1‑151
                                                                                                               CCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAA                                            <  1:205803/150‑1
                                                                                                                      CTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAAT                                    <  2:736558/151‑1
                                                                                                                      CTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAAT                                    <  1:15109/151‑1
                                                                                                                        GGATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTG                                  >  1:703539/1‑151
                                                                                                                          ATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGAT                                >  1:606081/1‑151
                                                                                                                          ATTCTTCCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGA                                 <  1:480664/150‑1
                                                                                                                                CCTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGG                          <  1:640030/151‑1
                                                                                                                                 CTTGGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGT                         <  1:348105/151‑1
                                                                                                                                    GGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGT                      >  1:68477/1‑151
                                                                                                                                    GGTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGT                      >  1:33566/1‑151
                                                                                                                                     GTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGT                      >  2:345364/1‑150
                                                                                                                                     GTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGT                      >  2:164908/1‑150
                                                                                                                                     GTTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGT                      <  1:859058/150‑1
                                                                                                                                      TTTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTCGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTC                     <  2:859580/150‑1
                                                                                                                                       TTATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTCAG                   >  2:423312/1‑151
                                                                                                                                         ATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTCAGTT                 >  2:377488/1‑151
                                                                                                                                         ATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTCAGTT                 >  1:386205/1‑151
                                                                                                                                         ATATTGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTCAGTT                 >  1:565621/1‑151
                                                                                                                                             TGGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTCAGTTAAAC             <  2:847675/151‑1
                                                                                                                                              GGTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTCAGTTAAA              >  1:799440/1‑149
                                                                                                                                               GTGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTCAGTTAAACT            <  2:480381/150‑1
                                                                                                                                                TGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTCAGTTAAACTCG          <  2:838920/151‑1
                                                                                                                                                TGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTCAGTTAAACTC           <  1:748715/150‑1
                                                                                                                                                TGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTCAGTTAAACTC           <  1:427283/150‑1
                                                                                                                                                TGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTCAGTTAAACTC           <  2:429307/150‑1
                                                                                                                                                TGCGCATAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTCAGTTAAACTC           <  2:90984/150‑1
                                                                                                                                                      TAATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTCAGTTAAACTCGTGGCGA    >  1:83765/1‑151
                                                                                                                                                       AATGAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTCAGTTAAACTCGTGGCGAT   >  2:679809/1‑151
                                                                                                                                                                                                                                                                                                               
ACGGCAGTTGAAAGCAATGTGTTGAGGTTGCATGGACGGTTAAGCCGAGAATACGGTAGTAAGTGAGATATGGGGTTTGGTCATTGTTAATGAGCATGACAATCATGACCGCCAACGACTGGATTCTTCCTTGGTTTATATTGGTGCGCATAATG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1590919‑1590765
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑taatgAGGCGTTATGGTAAATAGCCTATGCTAATGTCCGCTAAGAGCAAGAAGCGGAAGTTGGCAGTTTTGTGGACTGTCCCCACAAAAGTGACTACAGAAATAGTTGCAATTCATAATTGATCATGGGTTGTCAGTTAAACTCGTGGCGATT  <  NC_000913/1647024‑1646877

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.