New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1615598 =49 (1.120)1753 (41.870) 167/286 0.0 97.5% coding (795/882 nt) yneJ putative DNA‑binding transcriptional regulator
?NC_000913 = 1625301 43 (1.030)intergenic (+10/+34) ydeJ/dcp inactive PncC family protein/dipeptidyl carboxypeptidase II

Only 100 of 1895 total aligned reads displayed.

GTCTTATCACGGAATGTTGGCCTGTGTGATCGCAGGAGCAGGCATTGCGCTTATTCCGCGCTCTATGCTGGAAAGTATGCCGGGGCATCACCAGGTTGAAGCGTGGCCGTTAGCTGAGCAATGGCGTTGGTTAACAACCTGGCTGGTCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGATGTTCCGATGACTTATGAC  >  NC_000913/1615451‑1615748
                                                                                                                                                   |                                                                                                                                                      
   gtaccgtctggtttgcgtggcatattaaaggccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGcgt                                                                                                                                                  <  1:564289‑M1/7‑1 (MQ=255)
   gtaccgtctggtttgcgtggcatattaaaggccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGcgt                                                                                                                                                  <  2:319970‑M1/7‑1 (MQ=255)
       cgtctggtttgcgtggcatattaaaggccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCgtg                                                                                                                                              <  2:491985‑M1/11‑1 (MQ=255)
       cgtctggtttgcgtggcatattaaaggccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCgtg                                                                                                                                              <  1:180935‑M1/11‑1 (MQ=255)
         tctggtttgcgtggcatattaaaggccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCgtgg                                                                                                                                             >  1:485726‑M1/139‑150 (MQ=255)
                  cgtggcatattaaaggccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAaca                                                                                                                                   >  1:112844‑M1/130‑151 (MQ=255)
                    tggcatattaaaggccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAacac                                                                                                                                  >  2:439431‑M1/128‑150 (MQ=255)
                          attaaaggccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCg                                                                                                                             <  1:581272‑M1/28‑1 (MQ=255)
                          attaaaggccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCg                                                                                                                             <  1:536336‑M1/28‑1 (MQ=255)
                           ttaaaggccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCt                                                                                                                           <  2:140341‑M1/30‑1 (MQ=255)
                                ggccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAgg                                                                                                                      <  1:675974‑M1/35‑1 (MQ=255)
                                ggccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAgg                                                                                                                      <  1:548333‑M1/35‑1 (MQ=255)
                                ggccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAgg                                                                                                                      <  1:93064‑M1/35‑1 (MQ=255)
                                ggccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAgg                                                                                                                      <  2:634371‑M1/35‑1 (MQ=255)
                                ggccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAgg                                                                                                                      <  2:192381‑M1/35‑1 (MQ=255)
                                ggccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAgg                                                                                                                      <  1:15005‑M1/35‑1 (MQ=255)
                                 gccagaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGc                                                                                                                     >  1:337226‑M1/115‑150 (MQ=255)
                                     gaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTa                                                                                                                <  2:514859‑M1/41‑1 (MQ=255)
                                     gaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTa                                                                                                                <  2:473653‑M1/41‑1 (MQ=255)
                                     gaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTa                                                                                                                <  2:658868‑M1/41‑1 (MQ=255)
                                     gaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTa                                                                                                                <  1:616626‑M1/41‑1 (MQ=255)
                                     gaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTa                                                                                                                <  1:83883‑M1/41‑1 (MQ=255)
                                     gaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTa                                                                                                                <  2:152409‑M1/41‑1 (MQ=255)
                                     gaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTa                                                                                                                <  2:570234‑M1/41‑1 (MQ=255)
                                     gaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTa                                                                                                                <  2:75587‑M1/41‑1 (MQ=255)
                                     gaactacactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTa                                                                                                                <  2:306902‑M1/41‑1 (MQ=255)
                                     gaactacactgcggttatgcattttgctggcgactgagaaacggtattagctttagcggtgaggtttgctctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTa                                                                                                                <  1:281153‑M1/41‑1 (MQ=255)
                                           cactgcggttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAAc                                                                                                          >  2:556847‑M1/105‑151 (MQ=255)
                                                  gttatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGa                                                                                                   <  2:342838‑M1/54‑1 (MQ=255)
                                                    tatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGAtg                                                                                                 >  1:655000‑M1/96‑151 (MQ=255)
                                                    tatgcattttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGAtg                                                                                                 >  1:571341‑M1/96‑151 (MQ=255)
                                                            ttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGa                                                                                          <  1:603440‑M1/63‑1 (MQ=255)
                                                            ttgctggcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGAc                                                                                         >  2:106620‑M1/88‑151 (MQ=255)
                                                                aTGCTGGAAAGTATGCCGGGGCATCACCAGGTTGAAGCGTGGCCGTTAGCTGAGCAATGGCGTTGGTTAAAAACCTGGCTGGTCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCgg                                                                                     >  1:267532/1‑151 (MQ=255)
                                                                  gcgactgcgaaacggtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAACCACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGc                                                                                    >  2:330807‑M1/82‑150 (MQ=255)
                                                                                gtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCa                                                                     <  2:623496‑M1/84‑1 (MQ=255)
                                                                                gtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCa                                                                     <  2:612858‑M1/84‑1 (MQ=255)
                                                                                gtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCa                                                                     <  1:255163‑M1/84‑1 (MQ=255)
                                                                                gtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCa                                                                     <  2:131172‑M1/84‑1 (MQ=255)
                                                                                gtattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCa                                                                     <  1:40246‑M1/84‑1 (MQ=255)
                                                                                gtattagctttaacggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCa                                                                     <  2:294324‑M1/84‑1 (MQ=255)
                                                                                 tattagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCaa                                                                    >  2:218324‑M1/67‑151 (MQ=255)
                                                                                   ttagctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACATCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATg                                                                  >  2:225684‑M1/65‑151 (MQ=255)
                                                                                     agctttagcggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAg                                                                <  1:100357‑M1/89‑1 (MQ=255)
                                                                                             cggtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTAtttt                                                         >  2:166228‑M1/55‑150 (MQ=255)
                                                                                               gtgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGa                                                      <  2:399715‑M1/99‑1 (MQ=255)
                                                                                                tgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGAt                                                     >  1:627648‑M1/52‑151 (MQ=255)
                                                                                                tgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGAt                                                     >  1:69233‑M1/52‑151 (MQ=255)
                                                                                                tgaggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGAt                                                     >  1:19405‑M1/52‑151 (MQ=255)
                                                                                                   ggtttgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGt                                                  <  1:214576‑M1/103‑1 (MQ=255)
                                                                                                      gcgccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGtt                                                 <  1:310812‑M1/104‑1 (MQ=255)
                                                                                                         ccctcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGc                                            >  2:58833‑M1/43‑151 (MQ=255)
                                                                                                            tcgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGt                                         <  2:462435‑M1/112‑1 (MQ=255)
                                                                                                             cgcccagctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTTCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGtt                                        <  2:246807‑M1/113‑1 (MQ=255)
                                                                                                                   gctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATg                                  <  2:64674‑M1/119‑1 (MQ=255)
                                                                                                                    ctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAata                                    >  2:599009‑M1/32‑148 (MQ=255)
                                                                                                                    ctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGc                                 >  1:412861‑M1/32‑151 (MQ=255)
                                                                                                                    ctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGc                                 >  1:348807‑M1/32‑151 (MQ=255)
                                                                                                                    ctgctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGc                                 >  1:44007‑M1/32‑151 (MQ=255)
                                                                                                                       ctgcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGctc                               >  1:477760‑M1/29‑150 (MQ=255)
                                                                                                                         gcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCtat                            <  1:141556‑M1/125‑1 (MQ=255)
                                                                                                                         gcaattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCtat                            <  1:223729‑M1/125‑1 (MQ=255)
                                                                                                                           aattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCtatat                          >  2:451839‑M1/25‑151 (MQ=255)
                                                                                                                           aattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCtatat                          >  2:481931‑M1/25‑151 (MQ=255)
                                                                                                                           aattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCtatat                          >  1:465538‑M1/25‑151 (MQ=255)
                                                                                                                           aattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCtatat                          >  1:298010‑M1/25‑151 (MQ=255)
                                                                                                                           aattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCtatat                          >  2:669169‑M1/25‑151 (MQ=255)
                                                                                                                           aattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCtatat                          >  1:366761‑M1/25‑151 (MQ=255)
                                                                                                                           aattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCtatat                          >  2:209413‑M1/25‑151 (MQ=255)
                                                                                                                           aattactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCtatat                          >  2:179763‑M1/25‑151 (MQ=255)
                                                                                                                             ttactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAg                        >  1:596165‑M1/23‑151 (MQ=255)
                                                                                                                              tactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGt                       >  1:237508‑M1/22‑151 (MQ=255)
                                                                                                                              tactgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGt                       >  2:527262‑M1/22‑151 (MQ=255)
                                                                                                                                ctgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGGTGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCGCTATATAGtgg                     >  1:513996‑M1/20‑150 (MQ=255)
                                                                                                                                ctgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTTACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGa                     >  1:429840‑M1/20‑151 (MQ=255)
                                                                                                                                ctgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGa                     >  2:547011‑M1/20‑151 (MQ=255)
                                                                                                                                ctgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGa                     >  2:86374‑M1/20‑151 (MQ=255)
                                                                                                                                ctgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGa                     >  1:378264‑M1/20‑151 (MQ=255)
                                                                                                                                ctgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGa                     >  1:386870‑M1/20‑151 (MQ=255)
                                                                                                                                ctgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGa                     >  1:324873‑M1/20‑151 (MQ=255)
                                                                                                                                ctgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGa                     >  1:503838‑M1/20‑151 (MQ=255)
                                                                                                                                ctgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGa                     <  1:523026‑M1/132‑1 (MQ=255)
                                                                                                                                ctgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGa                     >  1:664591‑M1/20‑151 (MQ=255)
                                                                                                                                ctgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGa                     >  2:256698‑M1/20‑151 (MQ=255)
                                                                                                                                ctgctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGa                     >  2:412485‑M1/20‑151 (MQ=255)
                                                                                                                                 gTTAACAACCTGGCTGGTCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGa                     <  1:127019/150‑1 (MQ=255)
                                                                                                                                  gctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGATg                   <  2:267534‑M1/134‑1 (MQ=255)
                                                                                                                                  gctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGATg                   <  2:507470‑M1/134‑1 (MQ=255)
                                                                                                                                  gctataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGATg                   <  2:382633‑M1/134‑1 (MQ=255)
                                                                                                                                     ataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGATGTTc                >  2:233982‑M1/15‑151 (MQ=255)
                                                                                                                                     ataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGATGTTc                >  1:641781‑M1/15‑151 (MQ=255)
                                                                                                                                     ataaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGATGTTc                >  1:162309‑M1/15‑151 (MQ=255)
                                                                                                                                       aaccaggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGATGTTCCg              <  2:5385‑M1/139‑1 (MQ=255)
                                                                                                                                            ggctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGATGTTCCGATGa          <  2:689043‑M1/143‑1 (MQ=255)
                                                                                                                                             gctggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGATGTTCCGATGAc         >  2:280314‑M1/7‑150 (MQ=255)
                                                                                                                                             gctggTCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGATGTTCCGATGAc         <  2:363982/150‑1 (MQ=255)
                                                                                                                                                ggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGATGTTCCGATGACTTAt     <  2:356303‑M1/148‑1 (MQ=255)
                                                                                                                                                ggcCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGATGTTCCGATGACTTAt     <  2:425501‑M1/148‑1 (MQ=255)
                                                                                                                                                   CTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGATGTTCCGATGACTTATGAc  >  1:451608‑M1/1‑151 (MQ=255)
                                                                                                                                                   CTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGATGTTCCGATGACTTATGAc  >  2:117406‑M1/1‑151 (MQ=255)
                                                                                                                                                   |                                                                                                                                                      
GTCTTATCACGGAATGTTGGCCTGTGTGATCGCAGGAGCAGGCATTGCGCTTATTCCGCGCTCTATGCTGGAAAGTATGCCGGGGCATCACCAGGTTGAAGCGTGGCCGTTAGCTGAGCAATGGCGTTGGTTAACAACCTGGCTGGTCTGGCGTCGTGGTGCGAAAACACGTCCGCTCGAGGCATTTATTCAACTGCTGGATGTGCCTGACTCGGCAAGACAGGGATATCAATGAGCTATTTTTGATAGTTCTTGCGGTTAATATGCTCTATATAGTGATGTTCCGATGACTTATGAC  >  NC_000913/1615451‑1615748

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.