New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4633457 =32 (0.920)6 (0.180) 5/278 2.4 20.0% coding (289/513 nt) yjjX non‑canonical purine NTP phosphatase, ITPase/XTPase
?NC_000913 4633593 = 18 (0.550)coding (153/513 nt) yjjX non‑canonical purine NTP phosphatase, ITPase/XTPase
Rejected: Frequency below cutoff threshold.

GGCGGTAAACACGCCGATCGCCCCTTCCTTACGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCA  >  NC_000913/4633311‑4633602
                                                                                                                                                  |                                                                                                                                                 
aagttgtctgtgcgaccaccaatcccgctaaaattcaggccattctgcaggcatttcacgagatcttcggcgaaggatcctgccatattgcatccgttgccgtcgagagcggtgtaccggaacagccctttggcagtgaggaaacgcgcg                                                                                                                                                <  1:464746‑M1/4‑1 (MQ=255)
    gTAAACACGCCGATCGCCCCTTCCTTACGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCgctgg                                                                                                                                            >  1:478262/1‑150 (MQ=255)
        acacGCCGATCGCCCCTTCCTTACGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGctggctgg                                                                                                                                        >  2:336554/1‑150 (MQ=255)
                  cGCCCCTTCCTTACGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAAt                                                                                                                              >  1:67243/1‑150 (MQ=255)
                    ccccTTCCTTACGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATca                                                                                                                            >  2:43595/1‑150 (MQ=255)
                              aCGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTg                                                                                                                 <  1:201652/151‑1 (MQ=255)
                              aCGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTg                                                                                                                 <  1:262881/151‑1 (MQ=255)
                                    aaTCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTg                                                                                                           <  2:526164/151‑1 (MQ=255)
                                         catcaATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTg                                                                                                           >  2:471366/1‑146 (MQ=255)
                                          atcaATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCa                                                                                                     <  1:488896/151‑1 (MQ=255)
                                               tACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCAt                                                                                                 >  2:418821/1‑150 (MQ=255)
                                               tACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATc                                                                                                <  2:547665/151‑1 (MQ=255)
                                                 ccGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGa                                                                                              >  2:214356/1‑151 (MQ=255)
                                                    gTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATg                                                                                            >  1:367843/1‑150 (MQ=255)
                                                              aCATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAAt                                                                                 >  1:461059/1‑151 (MQ=255)
                                                              aCATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAAt                                                                                 >  1:428428/1‑151 (MQ=255)
                                                                 tCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCg                                                                               >  1:62766/1‑150 (MQ=255)
                                                                 tCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCg                                                                               >  2:267243/1‑150 (MQ=255)
                                                                      ggACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCAcc                                                                          >  1:131739/1‑150 (MQ=255)
                                                                            atcctgccatattgcatccgttgccgtcgagagcggtgtaccggaacagccctttggcagtgaggaaacgCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAAt                                                                   <  2:377821‑M1/81‑1 (MQ=255)
                                                                              cgcCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCa                                                                 >  2:155354/1‑151 (MQ=255)
                                                                                   cACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCct                                                             >  2:500092/1‑150 (MQ=255)
                                                                                     ccTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCct                                                             >  2:384402/1‑148 (MQ=255)
                                                                                       ttCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGa                                                        <  2:131742/151‑1 (MQ=255)
                                                                                              aCTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAAc                                                 <  2:431515/151‑1 (MQ=255)
                                                                                                 ttttCCAGAAGCTCCGTAGGCAGCGGCAACGTAGGGGACCGGGCCCTGCCGCGCTGGCTGTCGTTTTCAAGCACATCATAGCTGTAGGTGCTGTTTCGAACGATGCCAACTTCCCGCGCCGCACAAAAATCAGCCTCTGGAAGTaatctg                                               <  1:9990/150‑5 (MQ=255)
                                                                                                     gtcgagagcggtgtaccggaacagccctttggcagtgaggaaacgCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCggg                                           <  2:310372‑M1/105‑1 (MQ=255)
                                                                                                           tCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGc                                    <  2:432653/151‑1 (MQ=255)
                                                                                                            cACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCt                                   <  1:286692/151‑1 (MQ=255)
                                                                                                               gtgtaccggaacagccctttggcagtgaggaaacgCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTAc                                 <  2:96260‑M1/115‑1 (MQ=255)
                                                                                                                   ggCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGAt                            >  2:86465/1‑151 (MQ=255)
                                                                                                                        cGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGt                       >  1:176612/1‑151 (MQ=255)
                                                                                                                             ccctttggcagtgaggaaacgCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTgcgc                   <  2:111666‑M1/129‑1 (MQ=255)
                                                                                                                                 aGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAgcg              >  1:482204/1‑151 (MQ=255)
                                                                                                                                       gtgaggaaacgCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGtt        <  2:259350‑M1/140‑1 (MQ=255)
                                                                                                                                       gtgaggaaacgCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGtt        <  2:527477‑M1/140‑1 (MQ=255)
                                                                                                                                          cgcCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTcc     <  1:109216/151‑1 (MQ=255)
                                                                                                                                            ccTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCGAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTc   <  2:428437/151‑1 (MQ=255)
                                                                                                                                              tCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCa  >  1:72172/1‑150 (MQ=255)
                                                                                                                                                  |                                                                                                                                                 
GGCGGTAAACACGCCGATCGCCCCTTCCTTACGACCAATCTCATCAATACCGGTATAACGCGACATCACGGGACCAAGCGCCTCACCTTCACGCACTTTTTCCAGAATCACCGCAGGCAACGGCAAAGTAGCCGAACGCGCCTCGCCGCGCTGGCTGGCGTTTTCAATCACCACCCAACTGAAAGTGCTGTCACCATCGATGCCAGCTTCAATCGCCACCCAAAAATCAGCCTCTGGAAGTAAACGGCGGGCATTGGCTACCCGATTTCGTGCGCCAGCGCGCGTTTCCTCA  >  NC_000913/4633311‑4633602

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.