New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	CP000731	4294 =	90 (1.110)	5 (0.010)	5/264	9.3	1.2%	intergenic (+259/‑206)	USA300HOU_pUSA300HOUMR0006/cadR	hypothetical protein/cadmium binding protein
	?	NC_012417	2073 =	719 (0.890)					intergenic (+306/+20)	USA300HOU_RS14895/USA300HOU_RS14900	hypothetical protein/hypothetical protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTTGAAGATTTTTCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAG  >  CP000731/4154‑4434                                                                                                                                             |                                                                                                                                             tttGAATATTTTGCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGCAAAATAGTTAAACTCATGTAATCACTCCATAATTCCGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAAt                                                                                                                                              <  1:85085/141‑1 (MQ=255) tttGAAGATTTTTCGTAGATATAATTTGCTAATAAACTTCATAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAAt                                                                                                                                              <  1:235768/141‑1 (MQ=255) tttGAAGATTGTTAGTAGATATAATTGGCTAATAAACTTCCTAAAACTGACTAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAAt                                                                                                                                              <  2:245219/141‑1 (MQ=255)     aaGATTTTTCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTAt                                                                                                                                          <  1:274531/141‑1 (MQ=255)     aaGATTTTTCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTAt                                                                                                                                          >  1:163026/1‑141 (MQ=255)      aGATTTTTCGTATATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTAtt                                                                                                                                         <  2:282068/141‑1 (MQ=255)        aTTTTTCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATTACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGa                                                                                                                                       <  1:216783/141‑1 (MQ=255)        aTTTTTCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGa                                                                                                                                       >  1:167375/1‑141 (MQ=255)         tttttCGTAGATATAATTTGCTAATACACTTCCTAAACCTGTATAAAGACAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGAAACGCATTTATGCCGAAAACATTTATTGAt                                                                                                                                      >  1:84763/1‑141 (MQ=255)         tttttCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGAt                                                                                                                                      >  1:126246/1‑141 (MQ=255)          ttttCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCGGAAAAAATTTATTGATg                                                                                                                                     >  1:298007/1‑141 (MQ=255)           tttCGTAGATATAATTTGATAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGt                                                                                                                                    <  2:120870/141‑1 (MQ=255)            ttCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCCCTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGtt                                                                                                                                   <  1:286882/141‑1 (MQ=255)            ttCGTACATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGtt                                                                                                                                   <  1:291805/141‑1 (MQ=255)             tCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTg                                                                                                                                  <  1:190134/141‑1 (MQ=255)             tCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATCTATACCGAAAAAATTTATTGATGTTg                                                                                                                                  >  2:119347/1‑141 (MQ=255)             tCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATAACTCAATAATTCTAAAGTATCTAAATGTCTAAGCATAAATACACATTTAAGCATAAAAAATTTATTGAtttta                                                                                                                                  >  2:291805/1‑140 (MQ=255)               gTAGATATAATTGGCAAATAAACATCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCCTTTATGCCGAAAAAATTTATTGATGTTgag                                                                                                                                <  2:100011/141‑1 (MQ=255)                  gATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGagaag                                                                                                                             <  1:270519/141‑1 (MQ=255)                  gATATAATGTGCTAATAAACTGCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGagaag                                                                                                                             <  1:256382/141‑1 (MQ=255)                   atatAATGTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGagaaga                                                                                                                            <  2:95917/141‑1 (MQ=255)                       aaTTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAAccc                                                                                                                        <  2:114644/141‑1 (MQ=255)                        aTTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCt                                                                                                                       <  2:104175/141‑1 (MQ=255)                        aTTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCt                                                                                                                       <  1:196524/141‑1 (MQ=255)                            gCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAAc                                                                                                                   <  2:258033/141‑1 (MQ=255)                             cTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCCTTTATGCCGAAAAACTTTATTGATGTTGAGAAGAACCCTTAACt                                                                                                                  >  1:62810/1‑141 (MQ=255)                             cTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACt                                                                                                                  <  1:123174/141‑1 (MQ=255)                              taataaACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCAATAATTATAAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTa                                                                                                                 >  2:36568/1‑141 (MQ=255)                               aataaACTTCCTAAAACTGAATAAAGAAAAGTAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTATACATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACGCTTAACTaa                                                                                                                <  2:6802/141‑1 (MQ=255)                                 taaACTTCCTAAAACTGAAGAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTaaaa                                                                                                              >  2:6033/1‑140 (MQ=255)                                   aaCTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGCAGAACCCTTAACTAAACtt                                                                                                            >  1:266506/1‑141 (MQ=255)                                       tCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTTATGTTGAGAAGAACCCTTAACTAAACTTGCAg                                                                                                        >  1:9545/1‑141 (MQ=255)                                       tCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAg                                                                                                        >  1:124210/1‑141 (MQ=255)                                         cTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTGGAGAAGAACCCTTAACTAAACTTGCAGAc                                                                                                      >  2:121793/1‑141 (MQ=255)                                            aaaCTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTATCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGaa                                                                                                   >  1:92419/1‑141 (MQ=255)                                                  aaTAAACAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCgg                                                                                             <  1:102440/141‑1 (MQ=255)                                                   aTAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGc                                                                                            <  2:126246/141‑1 (MQ=255)                                                   aTAAAGAAAAATAGTTAAACTCATGTAATCACACCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGc                                                                                            >  2:269256/1‑141 (MQ=255)                                                     aaaGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCAACGCCTAGACACGAATTTATGCCGAAAAAATTTATTGATGTTGAACAGCCAAATTTATGATAGTTGCAGACGAATGTCGGCAt                                                                                          <  2:264172/141‑1 (MQ=255)                                                         aaaaaTAGTTAAACTCATGTAAGCACTACATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCg                                                                                      <  2:231624/141‑1 (MQ=255)                                                             aTAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAg                                                                                  >  2:198796/1‑141 (MQ=255)                                                              tAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGc                                                                                 <  1:54538/141‑1 (MQ=255)                                                               aGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTACATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTAAAAATAGTTAAATAGAACCCTTAACTAAACTTGCAGACGAATATCGGCATCGCGTAAGca                                                                                >  2:228134/1‑140 (MQ=25)                                                                gTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACTAATGTCGGCATAGCGTGAGCTa                                                                               <  1:59180/141‑1 (MQ=255)                                                                gTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTa                                                                               <  1:62823/141‑1 (MQ=255)                                                                gTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTa                                                                               <  2:203902/141‑1 (MQ=255)                                                                 ttAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTAt                                                                              <  2:167375/141‑1 (MQ=255)                                                                      ctaaTGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGc                                                                         <  1:65508/138‑1 (MQ=255)                                                                        cATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCg                                                                       <  1:167644/141‑1 (MQ=255)                                                                         aTGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGa                                                                      <  2:124210/141‑1 (MQ=255)                                                                            tAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCa                                                                   <  1:158771/141‑1 (MQ=255)                                                                               tCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGACGAAAAAATTTATTGATGTTAAGAAGAAACCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCAtac                                                                >  2:64719/1‑139 (MQ=255)                                                                                  cTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGAc                                                             >  1:266896/1‑141 (MQ=255)                                                                                   tCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACa                                                            >  1:175987/1‑141 (MQ=255)                                                                                            cTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTACGCCGCCCATTCGACTAGtttgagg                                                   >  2:88037/1‑137 (MQ=255)                                                                                             tGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGa                                                  <  1:200583/141‑1 (MQ=255)                                                                                              gAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGAt                                                 <  2:71921/141‑1 (MQ=255)                                                                                              gAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAAAATCAGGATAGCGTGAGCTATTAAGCCGCCCATTCCAAAAGTTTTGGGAt                                                 >  2:18305/1‑141 (MQ=17)                                                                                                aGTGTCTCCATGTCTAGGCATAGACACGCATTTATGGCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAGATTGGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTg                                               <  2:246285/141‑1 (MQ=17)                                                                                                   gtCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTa                                            >  2:250217/1‑141 (MQ=255)                                                                                                   gtCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTa                                            >  1:45079/1‑141 (MQ=255)                                                                                                    tctcCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTaa                                           <  1:133240/141‑1 (MQ=255)                                                                                                     ctcCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGCTTGTTAAg                                          >  1:97272/1‑141 (MQ=255)                                                                                                        cATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGt                                       >  2:173846/1‑141 (MQ=255)                                                                                                        cATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTATTGGGATTGTTAATGGt                                       >  2:28194/1‑141 (MQ=255)                                                                                                           gTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTcc                                    >  1:257324/1‑141 (MQ=255)                                                                                                            tCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGTCATAGCGTGAGCTATTAAGCCGCCAATTAGACTCGCTTTGGGATTGCTTAGCGTTcag                                   >  2:276626/1‑139 (MQ=14)                                                                                                            tCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCg                                   <  1:228134/141‑1 (MQ=255)                                                                                                            tCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCg                                   <  2:111737/141‑1 (MQ=255)                                                                                                              tACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACAATTCGAAACGCAGTGAGATTGTTAAGGGTTCCGAg                                 >  2:291908/1‑141 (MQ=14)                                                                                                                 gCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGCCAAGTTTTGGGATTGTTAAGGGTTCCGAGGcc                              >  2:157424/1‑140 (MQ=255)                                                                                                                  cATAGACACGTATTTGTGCTGAAGAAATTTAATGATGTTGAGAAGAACCCTTAACTAAACGTGCAGACGAATGTCGGTATAGCGTGAGCTGTTAAGCCGACCATTCGAAAAGTTTTGGGATTGTTAAGGGTTCCGAGGCtg                             <  2:106175/141‑2 (MQ=11)                                                                                                                  cATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTc                             >  1:289286/1‑141 (MQ=38)                                                                                                                  cATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTc                             <  2:15881/141‑1 (MQ=38)                                                                                                                   aTAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCa                            <  1:65697/141‑1 (MQ=35)                                                                                                                     aGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCATGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAAc                          <  2:275973/141‑1 (MQ=25)                                                                                                                      gACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACg                         <  1:1022/141‑1 (MQ=34)                                                                                                                       acacGCATTTATGCCGAAAAAATTTATTGTTGTTGAGAAGAACCCTTAACTAAACTTGCATACTAATGTCTATATAACGTTAGCTATTAATCCTACCATTCGACAAGTTTTTGGATTGTTAAGGGTTCCGAGGCTCAACGt                        >  2:78767/1‑141 (MQ=11)                                                                                                                            cATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATa                   <  2:163026/141‑1 (MQ=11)                                                                                                                            cATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATa                   >  2:134356/1‑141 (MQ=11)                                                                                                                               ttATGCCGAAAAAATTTATTGATGTTGAGAAGCACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGTGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAg                >  2:267933/1‑141 (MQ=11)                                                                                                                               ttATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAg                >  2:105725/1‑141 (MQ=11)                                                                                                                                tATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGc               >  1:275426/1‑141 (MQ=31)                                                                                                                                tATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGc               >  1:266203/1‑141 (MQ=31)                                                                                                                                  tGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCaa             >  1:196894/1‑141 (MQ=32)                                                                                                                                  tGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCaa             >  1:95444/1‑141 (MQ=32)                                                                                                                                   gCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAAt            <  1:36568/141‑1 (MQ=32)                                                                                                                                      gAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTgg         <  1:118972/141‑1 (MQ=32)                                                                                                                                       aaaaaaTTTAATGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGa        <  2:127640/141‑1 (MQ=14)                                                                                                                                        aaaaaTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGaa       <  2:135495/141‑1 (MQ=11)                                                                                                                                             tttATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAg  <  1:237401/141‑1 (MQ=11)                                                                                                                                             |                                                                                                                                             TTTGAAGATTTTTCGTAGATATAATTTGCTAATAAACTTCCTAAAACTGAATAAAGAAAAATAGTTAAACTCATGTAATCACTCCATAATTCTGAAGTGTCTCCATGTCTACGCATAGACACGCATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGAATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAAGCAATTGGAATAAAG  >  CP000731/4154‑4434

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.