Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	1043361	1043390	30	2 [0]	[1] 3	catD/yfmC_1	Putative oxidoreductase CatD/Fe(3+)‑citrate‑binding protein YfmC

TCACCTCCAACATTCATATTTTTAAAACATAGTCCAAATTATATTTGTAAACATGTGGAAAGTAAAGATTTTTTATAAGATTAATTATTAAATATTCTATTGTATTGAACAATTGTTGTAGAAAGATGTTTAAGTCATCAG  >  USA300TCH1516_ALE/1043220‑1043360                                                                                                                                             | tCACCTCCAACATTCATATTTTTAAAACATAGTCCAAATTATATTTGTAAACATGTGGAAAGTAAAGATTTTTTATAAGATTAATTATTAAATATTCTATTGTATTGAACAATTGTTGTAGAAAGATGTTTAAGTCATCAg  <  1:64236/141‑1 (MQ=255) tCACCTCCAACATTCATATTTTTAAAACATAGTCCAAATTATATTTGTAAACATGTGGAAAGTAAAGATTTTTTATAAGATTAATTATTAAATATTCTATTGTATTGAACAATTGTTGTAGAAAGATGTTTAAGTCATCAg  <  1:75590/141‑1 (MQ=255)                                                                                                                                             | TCACCTCCAACATTCATATTTTTAAAACATAGTCCAAATTATATTTGTAAACATGTGGAAAGTAAAGATTTTTTATAAGATTAATTATTAAATATTCTATTGTATTGAACAATTGTTGTAGAAAGATGTTTAAGTCATCAG  >  USA300TCH1516_ALE/1043220‑1043360

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑