Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	463494	463512	19	2 [1]	[1] 2	lpl2_1	putative lipoprotein

AAGAGAATATAAATGAAGTATAAAACAGAGAGACGTGAAGCGATGGGATATTTAAAAAGGTTTGCATTGTACATAAGCGTTATGATTTTAATATTTGCGATAGCAGGTTGTGGCAAAGGTAATGAAACAAAAGAAGATTCAAAGGAAGAACAAATCAAAAAGAGCTTTGCGATAAC  >  USA300TCH1516_ALE/463478‑463653                                    |                                                                                                                                             aaGAGAATATAAATGAANTATAAAACAGNGAGANGTGAAGCGATGGGATATTTAAAAAGGTTTGCATTGTACATAAGCGTTATGATTTTAATATTTGCGATAGCAGGTTGTGGCAAAGGTAATGAAACAAAAGAAGATTCa                                     >  1:88838/1‑141 (MQ=255)                                    tGAAGCGATGGGATATTTAAAAAGGTTTGCATTGTACATAAGCGTTATGATTTTAATATTTGCGATAGCAGGTTGTGGCAAAGGTAATGAAACAAAAGAAGATTCAAAGGAAGAACAAATCAAAAAGAGCTTTGCGATAAc  <  2:117712/141‑1 (MQ=255)                                    |                                                                                                                                             AAGAGAATATAAATGAAGTATAAAACAGAGAGACGTGAAGCGATGGGATATTTAAAAAGGTTTGCATTGTACATAAGCGTTATGATTTTAATATTTGCGATAGCAGGTTGTGGCAAAGGTAATGAAACAAAAGAAGATTCAAAGGAAGAACAAATCAAAAAGAGCTTTGCGATAAC  >  USA300TCH1516_ALE/463478‑463653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑