| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| JC | CP000731 | 6,552 | +TCTCCAGGCACTTGTGCATATTCTGAAA | 100% | intergenic (+1069/‑419) | cadX → / → USA300HOU_pUSA300HOUMR0010 | cadmium efflux regulator/MarR family transcriptional regulator |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 6552 | 0 (0.000) | 115 (0.900) +TCTCCAGGCACTTGTGCATATTCTGAAA |
74/202 | NT | 100% | intergenic (+1069/‑419) | cadX/USA300HOU_pUSA300HOUMR0010 | cadmium efflux regulator/MarR family transcriptional regulator |
| ? | CP000731 | 6553 = | 0 (0.000) | intergenic (+1070/‑418) | cadX/USA300HOU_pUSA300HOUMR0010 | cadmium efflux regulator/MarR family transcriptional regulator | |||||
Only 100 of 149 total aligned reads displayed.
AAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTACACC > CP000731/6418‑6691 | aaaaTTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctcc < 1:105076‑M1/140‑6 (MQ=255) aaaTTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctcca < 2:564955‑M1/140‑7 (MQ=255) aTTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccagg < 1:704702‑M1/140‑9 (MQ=255) tttCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggc < 1:519916‑M1/140‑10 (MQ=255) tCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAACACGGGT‑TGATTTGATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGACCAATCCACcctccagccac > 1:698642‑M1/1‑129 (MQ=255) aGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcactt > 1:523387‑M1/1‑127 (MQ=255) aGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACactccaggcactt > 2:213655‑M1/1‑127 (MQ=255) aGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATACACCTTTCTTGTGGAATAGGAACAATCCACtctccaggcaatt > 2:47596‑M1/1‑127 (MQ=255) ggTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttg > 1:484757‑M1/1‑126 (MQ=255) gTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgt > 1:622012‑M1/1‑125 (MQ=255) gtgtgaTTTGATATCCATTCCATGTTTTTCTATTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCGTGGGGAATAGTAACAATCCACtctccaggcacttgtg < 2:643379‑M1/139‑17 (MQ=255) gtgATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgca < 1:558350‑M1/140‑19 (MQ=255) gATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcata < 1:94585‑M1/140‑21 (MQ=255) gATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctg < 1:316651‑M1/140‑26 (MQ=255) atatTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctga > 1:639089‑M1/1‑114 (MQ=255) attcattcCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttttgcatattctgaaa > 2:121920‑M1/1‑112 (MQ=255) attcattcCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaa < 1:480314‑M1/140‑29 (MQ=255) ttcattcCATATTTTTCTCGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaa < 2:26422‑M1/140‑30 (MQ=255) tcattcCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaat > 1:530757‑M1/1‑110 (MQ=255) cattcCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatc < 1:308976‑M1/140‑32 (MQ=255) tcCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccac < 1:420827‑M1/140‑35 (MQ=255) atatTTTTCTAGTTCAACAATTGATGCTGGTGGCATAAAACCGGCTGTCCCAG‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctg < 1:440818‑M1/140‑38 (MQ=255) atTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCAAccgctgggcacttgtgcatattctgaaaatccacctgta > 1:477601‑M1/1‑101 (MQ=255) tttttCTAGTTCCAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCCTTCATAGACATTTCTTGGGGAATAGGAACAATCCACtctccacgcacttgtgcatactctgcaaatccacctgtat > 2:650841‑M1/1‑100 (MQ=255) ttttCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatg < 1:599830‑M1/140‑42 (MQ=255) ttttCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatg > 1:491748‑M1/1‑99 (MQ=255) tttCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgt < 1:261233‑M1/140‑43 (MQ=255) tCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgt < 1:78229‑M1/140‑45 (MQ=255) ccagtTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtc < 1:115411‑M1/138‑46 (MQ=255) cTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGACTAGGAACAATCCACtctccaggcacttgtggtttttcagaaaatcaacctgtatgtgta > 1:20423‑M1/1‑95 (MQ=255) gTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacg < 2:678499‑M1/140‑49 (MQ=255) gTTCAAAAATTGATAATGCTGCCGTAAAACCGGATGTGACAG‑TTACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacg < 2:311767‑M1/140‑49 (MQ=255) gTTCAAAAATGGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTCTAATAGACATTTCTTGGGGAATAGCAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacg < 1:575093‑M1/140‑49 (MQ=255) catcaAAAATGGATAATGCTGCGGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTTGGGAATAGGAACACTCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacg < 2:363489‑M1/138‑49 (MQ=255) ttCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgc < 1:470197‑M1/140‑50 (MQ=255) aaaaaTTGATAATGCTGCCGTAAAACTGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaa < 2:659278‑M1/140‑53 (MQ=255) aaaaaTTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaa < 2:549938‑M1/140‑53 (MQ=255) aaaaTTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgtatattctgaaaatccacctgtatgtgtcacgccaac > 1:204495‑M1/1‑87 (MQ=255) aaaaTTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaac > 1:128280‑M1/1‑87 (MQ=255) aaaaTTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacccgcccgtgtcacgccaac > 2:520050‑M1/1‑87 (MQ=255) aaTTGATGATGCTGCCGTAAAACCTGCTGTGCCAT‑ATACCATAGACTCTTTAGTTGACTGTTCTTGGGGAATAGTAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccagatc < 2:315258‑M1/140‑56 (MQ=255) aaTTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccgacat > 1:429888‑M1/1‑85 (MQ=255) aaTTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaccat > 2:136883‑M1/1‑85 (MQ=255) aTTGATAATGCTGCCGTAAATTCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatc < 2:243142‑M1/140‑57 (MQ=255) tGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgcccacatcat > 1:45673‑M1/1‑82 (MQ=255) tGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcat > 1:652547‑M1/1‑82 (MQ=255) tGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctggaggtgtgacggcaacatcat > 2:675305‑M1/1‑82 (MQ=255) tGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATAATGTAGACTCTCTACTAGCGATTTCTTGGTGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcat < 2:528897‑M1/140‑59 (MQ=255) tGATAATGCTGCCGTAAAACCCGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcat < 2:387404‑M1/140‑59 (MQ=255) tGAGAATCCTGTCGTAAACCCGGCTGTGCCAG‑ATACCATAGACGCTTTAATAGTCATTTCGTGGGGAATAGGAACAATCCACtctccagtcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcat < 2:62224‑M1/140‑59 (MQ=255) gATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcata > 2:450653‑M1/1‑81 (MQ=255) aTAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatactctgaaaatccacccgtacgcgtcacgccaacatcatca > 1:657085‑M1/1‑80 (MQ=255) aTAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAAACACTTTTTGGGGTTGACAGACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataa > 1:330379‑M1/1‑80 (MQ=255) tAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataac > 2:463434‑M1/1‑79 (MQ=255) tAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataac > 2:323204‑M1/1‑79 (MQ=255) tgctgcCGTAAAACCGGCTGTACCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccag < 2:690398‑M1/140‑65 (MQ=255) ccGTAAAACCGGCTGTGCCAT‑ATACCATAGACTGTTTAATAGACATGTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtgaggccaaaatcataacgagtaact > 1:182213‑M1/1‑71 (MQ=255) gTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaa < 2:660908‑M1/140‑72 (MQ=255) aaCCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGAGCAAAGAAACAATCCACtctccaggcacttgtgcatattctgaaaacccacctgtatgtctcacgccaacatcataaccagtaactaataca > 2:465405‑M1/1‑65 (MQ=255) ccGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACACTCCTTGCGGAATAGGAACAAACCACtctccaggcacttgtgcatatcctgaaaatccacctgtacgtgtcacgccaacaccatcaccagcaactcataaact > 2:317826‑M1/1‑63 (MQ=255) cGGCTGTGCCAT‑ATACCATAGACGCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacatta < 1:553799‑M1/140‑79 (MQ=255) ggCTGTGCCAT‑ATCCCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataacccataactaatacattat > 2:377610‑M1/1‑61 (MQ=255) ggCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACACTCCTCtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaccatcataaccagtaactaatacattat < 2:193158‑M1/140‑80 (MQ=255) gtgCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgcc > 2:531040‑M1/1‑57 (MQ=255) gtgCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgcc < 1:471850‑M1/140‑84 (MQ=255) ccAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttc > 2:495866‑M1/1‑54 (MQ=255) t‑ataCCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttcttt < 2:331410‑M1/140‑90 (MQ=255) cATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttcaact > 2:216395‑M1/1‑46 (MQ=255) cATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaact > 1:583639‑M1/1‑46 (MQ=255) tAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaactta < 2:622012‑M1/140‑97 (MQ=255) gACTCTTTAATACACATTCCTTGGTGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatc < 2:72527‑M1/140‑99 (MQ=255) aCTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattctcgccttcttcaaacttatca > 1:276755‑M1/1‑41 (MQ=255) aCTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatca < 1:121920‑M1/140‑100 (MQ=255) tctTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcatt < 1:404258‑M1/140‑102 (MQ=255) ctTTAATAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactactacattatcgccttctttaaacttatcattc > 1:367542‑M1/1‑38 (MQ=255) aaTAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgcac > 1:507382‑M1/1‑34 (MQ=255) aTAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaact < 1:412719‑M1/140‑108 (MQ=255) aTAGACATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaact < 2:484757‑M1/140‑108 (MQ=255) aTAGACATTTCTGTGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgcatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaact < 2:567618‑M1/140‑108 (MQ=255) aCATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgat < 1:429746‑M1/140‑112 (MQ=255) cATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgatt > 2:69808‑M1/1‑28 (MQ=255) cATTTCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgcctcctttaaacttatcattcgaacttgatt > 2:394602‑M1/1‑28 (MQ=255) tttCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattca < 1:616941‑M1/140‑115 (MQ=255) ttCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaa > 2:690046‑M1/1‑25 (MQ=255) ttCTTGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaa < 1:450653‑M1/140‑116 (MQ=255) cTTGGGGAATAGGAACAATCCACtctacgggcacttgggcacattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaaca < 1:440537‑M1/140‑118 (MQ=255) ttGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttctcattcgaacttgattcaacaa > 2:59364‑M1/1‑22 (MQ=255) tGGGGAATAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtccctaagacagtatcgccttctttaaacttatcattcgaacttgattcaacaat > 1:159704‑M1/1‑21 (MQ=255) agtagGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctg < 2:127377‑M1/138‑125 (MQ=255) aaTAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctg < 1:5981‑M1/140‑125 (MQ=255) aTAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgc > 1:329102‑M1/1‑15 (MQ=255) tAGGAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttcaacttatcattcgaacttgattcaacaatacctgca > 2:561663‑M1/1‑14 (MQ=255) ggAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtcactaatacattatcgccttctttaaacttatcattcgaacttgattccacaatacctgcaac > 2:160655‑M1/1‑12 (MQ=255) gAACAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaa < 2:549088‑M1/140‑130 (MQ=255) aCAATCCACtctccaggcacttgttcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattctcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaatc > 1:333663‑M1/1‑9 (MQ=255) cAATCCACtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaatct < 1:20961‑M1/140‑133 (MQ=255) aCtgtcccggcacctgttcacattctgacaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaatctatacca < 2:182213‑M1/140‑139 (MQ=255) aCtctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaatctatacca < 1:380876‑M1/140‑139 (MQ=255) ctctccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaatctataccag < 1:213655‑M1/140‑140 (MQ=255) ctccccaggcacttgtgcatattctgaaaatccacctgtatgtgtcacgccaacatcataaccagtaactaatacattatcgccttctttaaacttatcattcgaacttgattcaacaatacctgcaaaatctataccag < 1:130466‑M1/140‑140 (MQ=255) | AAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCAT‑ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTACACC > CP000731/6418‑6691 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |