| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 618,657 | T→C | 6.6% | D1253D (GAT→GAC) | sdrD → | Serine‑aspartate repeat‑containing protein D |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 618,657 | 0 | T | C | 6.6% | 727.0 / 2.6 | 250 | D1253D (GAT→GAC) | sdrD | Serine‑aspartate repeat‑containing protein D |
| Reads supporting (aligned to +/- strand): ref base T (130/97); new base C (4/16); total (135/115) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.76e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 299 total aligned reads displayed.
TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGACAGCGACTCAGAC > USA300TCH1516_ALE/618567‑618747 | ttcagatAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtcagat < 1:3307640/91‑1 (MQ=39)ttcagatAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGAGAGCGATTCGGACTCAGATAGCGACtcagat > 1:4343519/1‑91 (MQ=255) cagatAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtcagattc > 2:1284257/1‑91 (MQ=37) cagatAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtcagattc > 1:3957892/1‑91 (MQ=39) cagatAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtcagattc > 2:4277515/1‑91 (MQ=37) cagatAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGATAGCGATTCGGACTCAGATAGCGACtcagactc > 2:3703689/1‑91 (MQ=255) cagacAGCGACTCAGACTCAGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtcagattc < 2:5095956/91‑1 (MQ=255) agagagCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtcagattca < 2:2066349/91‑1 (MQ=255) gatAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtcagattcag < 1:4072411/91‑1 (MQ=38) gatAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACtcagattcag < 1:4525082/91‑1 (MQ=37) tAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGATAGCGATTCGGACTCAGATAGCGACccagagtcagat > 2:4118612/1‑91 (MQ=255) aGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATa < 1:1780823/91‑1 (MQ=39) gCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAg > 2:2682295/1‑91 (MQ=37) gCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGAATCAGATAg > 1:3999792/1‑91 (MQ=37) gACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTg < 1:2197885/91‑1 (MQ=255) aCTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGa < 2:1968709/91‑1 (MQ=255) cTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACGCAGATAGCGACTCAGACACAGAGAGCGac > 2:5028495/1‑90 (MQ=11) tCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGAtt < 2:1576862/91‑1 (MQ=255) cAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTc > 2:2862178/1‑91 (MQ=255) gATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAg < 1:1391865/91‑1 (MQ=255) gATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGACTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGACAGTGATACAg > 2:1047918/1‑91 (MQ=255) ttCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGAc < 2:1408656/91‑1 (MQ=255) cGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTc < 1:5034693/91‑1 (MQ=255) cGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTc < 1:876799/91‑1 (MQ=255) cGGACAGCGATTCAGACTCAGATAGCGACGCAGATTCAGATAGCGATACAGACTCAGATAGCGACTCAGATTCAGAGAGTGAGACAGACTc > 2:3632258/1‑91 (MQ=11) ggACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCa > 2:867948/1‑91 (MQ=255) ggACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCa < 1:3154483/91‑1 (MQ=255) ggACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCa > 1:2585647/1‑91 (MQ=255) gACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAg > 1:3182238/1‑91 (MQ=255) gACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGACTCAGATAGTGATTCAGACTCAg > 1:3460705/1‑91 (MQ=255) aCAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGa > 1:1207979/1‑91 (MQ=255) gCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAg > 2:2625802/1‑91 (MQ=255) gCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGATAg > 2:2970886/1‑91 (MQ=255) aTTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGa < 1:2702792/91‑1 (MQ=255) aTTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGa < 1:1478754/91‑1 (MQ=255) ttCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGAc > 1:1098673/1‑91 (MQ=255) ttCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGAc < 1:1063460/91‑1 (MQ=255) ttCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGAc < 1:4646591/91‑1 (MQ=255) tCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACt < 1:4851206/91‑1 (MQ=255) tCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACt > 1:3166056/1‑91 (MQ=40) tCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGAcc > 2:1855972/1‑90 (MQ=255) cAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTc > 2:531336/1‑91 (MQ=255) cAGACTCAGATAGCGACTCAGATTCAGACAGCGATTCGGACTCAGACAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTc < 2:2505291/91‑1 (MQ=255) gACGCAGATAGCGACTCAGACTCAGACAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAg < 2:3968444/91‑1 (MQ=255) cTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGAt < 2:4972694/91‑1 (MQ=255) cAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTc > 1:497448/1‑91 (MQ=255) cAGATAGCGACTCAGATTCAGATAGCGATTCAGACTCAGATAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTc < 2:1681805/91‑1 (MQ=255) aGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGAGTCAGACTCAGATAGCGACTCAGATTCa > 2:2102850/1‑91 (MQ=255) gATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAg > 2:1649270/1‑91 (MQ=255) aTAGCGACTCAGATTCAGATGGCGATTCAGACTCCCATAGCGACTCAGACTCAGATAGTGATTCACACTCAGATAGCGACTCAGATTCata < 2:4720901/91‑3 (MQ=11) tAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGAc < 1:529897/91‑1 (MQ=255) tAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGAc > 1:3710594/1‑91 (MQ=255) gACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCg < 1:3051485/91‑1 (MQ=255) tcacattcagatAGCGATTCGGACTCAGATAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACt < 2:2358691/91‑1 (MQ=255) cagattcagatAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTc > 2:1087737/1‑91 (MQ=255) cagattcagatAGCGAGTCGGACTCAGACAGCGACTCAGACTCAGATAGTGATTCAGACGCAGATAGCGACTCAGATTCAGACAGCGACTc < 2:698640/91‑1 (MQ=11) agattcagatAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCa < 1:2736923/91‑1 (MQ=255) gattcagatAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAg < 1:928014/91‑1 (MQ=255) gattcagatAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAg < 2:5462982/91‑1 (MQ=255) tcagatAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGAtt > 1:3478032/1‑91 (MQ=255) cagatAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCACATTCAGACAGCGACGCAGACTc > 2:3170525/1‑91 (MQ=255) gatAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGCCTCAGATTCgg > 2:3841925/1‑91 (MQ=255) tAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACACAGATAGCGACTCAGCTTCAGACAGCGACCCAGATTCGGAt > 2:5630927/1‑91 (MQ=255) aGCGATTCGGACTCAGATAGCGACTCAGACTCAGATAGTGAGTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATa < 2:519911/91‑1 (MQ=255) cGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGc > 1:1952278/1‑91 (MQ=255) gATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATACAGACTCAGACAGCGACTCAGATTCAGACAGCGACTCAGATACGGCTAGCg > 2:2785242/1‑91 (MQ=17) ttCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGAc < 2:23832/91‑1 (MQ=255) ttCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGAc > 1:5404245/1‑91 (MQ=255) ttCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGAc < 2:4185439/91‑1 (MQ=255) ttCGGACTCAGATAGCGACTCAGACTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGAc < 1:1679453/91‑1 (MQ=255) cagACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTc < 2:478618/89‑1 (MQ=255) cGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGAcac > 1:5126532/1‑89 (MQ=255) cGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTc > 1:2260800/1‑91 (MQ=255) ggACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCa < 2:4462414/91‑1 (MQ=255) cTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGAt > 1:2480562/1‑91 (MQ=255) cAGATAGCGACTCAGATTCAGACAGTGATTCAGACTCAGATAGCGACTCAGACTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTc > 1:1276840/1‑91 (MQ=255) gacaGCGACTCAGACTCAGATAGTGACTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGACTCGGATAGCGACTCAGATTCAg < 2:4326533/88‑1 (MQ=11) tAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGAc > 1:195586/1‑91 (MQ=255) tAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGAc > 1:2891029/1‑91 (MQ=255) caGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGAc < 2:1474254/90‑1 (MQ=255) aGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGAc < 2:1352477/60‑1 (MQ=35) gCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGACAg > 1:2060286/1‑91 (MQ=255) gCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGACAg > 2:2189657/1‑91 (MQ=255) gCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGACAg < 1:1426731/91‑1 (MQ=255) gCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGACAg > 1:3917599/1‑91 (MQ=255) cGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGACAGc > 1:2946301/1‑91 (MQ=255) cGACTCAGATTCAGATAGTGATTCAGACTCACATAGCGACTCAGATTCTGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGACAGc > 1:5504346/1‑91 (MQ=255) cGACTCAGAGTCAGATAGCCAATCAGACTCAGCTCGCGACTCAGATTCAGACAGACACTCAGATCCGGAGAGCGACTCAGATTCAGACAGc < 2:3902327/91‑1 (MQ=14) gACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCa < 1:5588623/48‑1 (MQ=40) aCTCAGATTCAGATAGTGATTCAGACTCGGATAGCGATTCAGATTCAGACAGCGACTCAGATTCGGATAGCGTCTCAGATTCAGACAGCGa < 2:3369803/91‑1 (MQ=255) aCTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGACAGCGa < 1:691500/91‑1 (MQ=255) cTCAGATTCAGCTAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCAGAGAGCCACTCAGATACAGACAgagag > 2:5624779/1‑90 (MQ=14) cTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGACAGCGAc > 1:296570/1‑91 (MQ=255) cTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGACAGAGAc > 2:91175/1‑91 (MQ=255) cagattcagatAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGACAGCGACTc > 2:3786766/1‑91 (MQ=255) cagattcagatAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGACAGCGACTc > 2:3435426/1‑91 (MQ=255) gattcagatAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGACAGCGACTCAg > 2:422828/1‑91 (MQ=255) attcagatAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGACAGCGACTCAGa > 2:5269266/1‑91 (MQ=255) ttcagatAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATATCGACTCAGATTCAGACAGCGACTCAGAc < 2:5408082/91‑1 (MQ=255) ttcagatAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGACAGCGACTCAGAc > 1:4243942/1‑91 (MQ=255) | TTCAGATAGCGACTCAGATTCGGACAGCGATTCAGACTCAGATAGCGACTCAGATTCAGATAGCGATTCGGACTCAGATAGCGACTCAGATTCAGATAGTGATTCAGACTCAGATAGCGACTCAGATTCAGACAGCGACTCAGATTCGGATAGCGACTCAGATTCAGACAGCGACTCAGAC > USA300TCH1516_ALE/618567‑618747 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |