| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 2,256,068 | T→C | 5.0% | A144A (GCT→GCC) | deoD1 → | Purine nucleoside phosphorylase DeoD‑type 1 |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 2,256,068 | 0 | T | C | 5.0% | 224.5 / 3.3 | 80 | A144A (GCT→GCC) | deoD1 | Purine nucleoside phosphorylase DeoD‑type 1 |
| Reads supporting (aligned to +/- strand): ref base T (39/35); new base C (2/2); total (41/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 5.90e-01 | |||||||||||
AGAAAATGTTAACTTATACGATGTTATTATTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTATCGAAATGGAATCAGCTGGTTTATATTTAA > USA300TCH1516_ALE/2255930‑2256207 | aGAAAATGTCAACTTATACGATGTTATTATTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGa < 1:413490/141‑1 (MQ=255) aaaaTGTTAACTTATACGATGTTATTATTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGCCTTCGACTTAGTAACTAAAGCTAAAAATGTCGCTGccc > 2:551999/1‑141 (MQ=255) aaTGTTAACTTATACGATGTTATTATTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCTCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCaa < 1:375941/141‑1 (MQ=255) ttAACTTATACGATGTTATTATTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCg > 1:280054/1‑141 (MQ=255) tAACTTATACGATGTTATTATTGCACAAGCTTCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCgg < 1:64468/141‑1 (MQ=255) tAACTTATACGATGTTATTATTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCgg < 1:141503/141‑1 (MQ=255) tAACTTATACGATGTTATTATTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCgg < 1:531976/141‑1 (MQ=255) aaCTTATACGATGTTATTATTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAATTAAAGCTAAAAATGTCGTTGTCCAAATCGGt > 2:100795/1‑141 (MQ=255) aaCTTATACGATGTTATTATTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGt > 1:177202/1‑141 (MQ=255) aaCTTATACGATGTTATTATTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGt < 1:535732/141‑1 (MQ=255) aaCTTATACGATGTTATTATTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGt < 1:71484/141‑1 (MQ=255) ttATACGATGTTATTATTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGct > 2:340010/1‑141 (MQ=255) ataCCATGTTATTATTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGctac < 1:85083/141‑1 (MQ=255) gATGTTATTATTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCtactacc > 2:117832/1‑140 (MQ=255) gATGTTATTATTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGATACTaca > 2:554206/1‑141 (MQ=255) ttattaTTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAACCATGTCGCGGACCAAATCGGTGCTACTACACACg < 2:113883/141‑1 (MQ=255) ttattaTTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACg < 2:527063/141‑1 (MQ=255) tattatGGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTTATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGt < 2:153296/141‑1 (MQ=255) attactGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTGAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTa < 2:355202/141‑1 (MQ=255) ttattGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAg < 2:88105/141‑1 (MQ=255) attGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAGTACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGt > 2:437397/1‑141 (MQ=255) attGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACAAACTCGGTGCTACTACACACGTAAGt > 2:102305/1‑141 (MQ=255) attGCACAAGCTGCATCAACTAATTAAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAgga > 2:157148/1‑140 (MQ=255) acaAGCTGCATCAACTAATTCAACATATTTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCTAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAActt < 2:180161/141‑3 (MQ=255) aGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGGGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGtatt > 1:15119/1‑141 (MQ=255) cTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGtattat > 1:584325/1‑141 (MQ=255) aaCTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGa < 1:420088/141‑1 (MQ=255) aCTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGAt < 2:546358/141‑1 (MQ=255) cTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATa < 1:261568/141‑1 (MQ=255) ttCAAATTATGTAGATCAATACAATATTCCTTGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACAtt < 1:252346/141‑1 (MQ=255) ttCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACAtt < 2:177202/141‑1 (MQ=255) ttCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACAtt > 1:533725/1‑141 (MQ=255) atCAAAGTAAGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGCGGCTACTACACACGTAGGTAACGGATTATCTTCTGATACAtt < 1:100795/140‑1 (MQ=255) aTTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACa < 1:551999/141‑1 (MQ=255) taggTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTGTCTTTTGATACATTTTACAAt < 1:341351/138‑1 (MQ=255) aTGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCCGACCAAATCGGTGCTACTACACACGTAGGTAACGTTTTATCTTCTGATACATTTTACAATg > 1:34343/1‑141 (MQ=255) aTGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCCGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATg > 1:34351/1‑141 (MQ=255) gTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGcc < 1:340010/141‑1 (MQ=255) gTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCACTGACTTCGAGTTATTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGAATTATCTTCTGATACATTTTACAATGcc > 2:257321/1‑141 (MQ=255) aatacaataTTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAATGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGAGCCaa > 1:158328/1‑141 (MQ=255) aatacaataTTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTGTTAATTTCTGATACAATTTACAATGCCGATCCaa > 1:5878/1‑141 (MQ=255) tacaataTTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACa < 2:520858/141‑1 (MQ=255) aataTTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTc < 1:128378/141‑1 (MQ=255) atatTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCa > 2:42482/1‑141 (MQ=255) atatTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCa > 2:42598/1‑141 (MQ=255) atatTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCa > 2:426056/1‑141 (MQ=255) atTCCAGGTCACTTCGCGCCTAGCGCTGACTTCGAGTTAGTAACGAAATCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAat < 1:499855/141‑1 (MQ=255) ttCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAatg < 2:280054/141‑1 (MQ=255) ggTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCt > 1:377071/1‑141 (MQ=255) ggTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATAACCTTCTGATACATTTTCCAATGCCGATCCAACATTCAATGATGCt > 2:242303/1‑141 (MQ=255) tCATTTCGCGCCTATCGCTTACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACGCACGTAGGTAACGTATTATCTTCTTATACATTTTACAATGCCGATCCAACATTCAATGATGCTTg < 2:459344/141‑1 (MQ=255) tCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTAAATGATGCTTg > 2:27452/1‑141 (MQ=255) aTTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGCTCCAACATTCAATGATGCTTGGa > 1:152256/1‑141 (MQ=255) tttCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGaa > 2:409650/1‑141 (MQ=255) tttCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGCGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGCTGCTTGGaa > 2:76613/1‑141 (MQ=255) tttCGAGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACAAAAACGGAGGTAATACAAACGTAGGTAGCGGATTATCTTCTTATACATTTTACAATGCAGATCCAACATTCAATGATGCTTGGaa > 2:237750/1‑141 (MQ=255) aCTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGGATTTTAg > 1:582166/1‑141 (MQ=255) ttCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGt > 1:21395/1‑141 (MQ=255) tCGAGTTAGTGACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTa > 1:483083/1‑141 (MQ=255) cGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTAt < 1:36540/141‑1 (MQ=255) cGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTAt > 1:230105/1‑141 (MQ=255) cGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACAAGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAACGATGCTTGGAAAAAAATGGGTATTTTAGGTAt > 1:444213/1‑141 (MQ=255) aGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACAACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTATCg > 2:216387/1‑141 (MQ=255) gTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATGCAACATTAAATGATGCTTGGAAAAAAATGGGTTTTTTAGGAATAGa > 2:172001/1‑141 (MQ=255) ttaatAAAGCTAAATATGTCGTTGACCAAATCGGTGATACTTCACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGATTAGAAAAAAATGGGTATTTTAGGTATCGAAATgg < 2:320975/137‑1 (MQ=255) tAACTAAAGCTAAAAATGTCGCCGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTATCGAAATgg < 2:34351/141‑1 (MQ=255) tAACTAAAGCTAAAAATGTCGCCGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTATCGAAATgg < 2:34343/141‑1 (MQ=255) aaCTAAAGCTAATAATGTCGTTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGG‑AAAAAATGGGTATTTTAGGTATCGAAATGGaa < 2:103560/141‑1 (MQ=255) aCTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACTTTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTATCGAAATGGaa < 2:597511/141‑1 (MQ=255) gCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTATCGAAATGTAATCAGCt > 1:582797/1‑141 (MQ=255) gCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTATCGAAATGGAATCAGCt > 1:64078/1‑141 (MQ=255) gCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTATCGAAATGGAATCAGCt < 1:352709/141‑1 (MQ=255) cTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAACTGGGTATATTAGGTATCGAAAAGGAATCAGCTg > 2:627482/1‑141 (MQ=255) aaaTGTCGCTGACCAAATCGGTGCTACTCAACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTATCGAAATGGAATCAGCCGGttt > 1:421987/1‑141 (MQ=255) tggcGCTGACCAAATCGGTGGTAGTACAGAGGTAGGTAAGGGATTATCTTCTGATACATTTTACGAGGGCGTTCCAACTTTCAAAGATGCTTGGAAAAAAATGGGTATTTTAGGTATCGAAATGGAATCAGCTGGTTtata < 2:458802/138‑1 (MQ=255) tGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGGATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTATCGAAATGGAATCAGCTGGTTtata > 1:520588/1‑141 (MQ=255) gTCGCGGACCAAATCCGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACACTCTGCGACGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTATCGAAATGGAATCAGCTGGTTTatat < 1:316710/141‑1 (MQ=255) tCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTATCGAAATGGAATCAGCTGGTTTATAtt < 1:393362/141‑1 (MQ=255) gCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTATCGAAATGGAATCAGCTGGTTTATATTTa < 1:426056/141‑1 (MQ=255) cTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTATCGAAATGGAATCAGCTGGTTTATAGTTaa > 1:265953/1‑141 (MQ=255) | AGAAAATGTTAACTTATACGATGTTATTATTGCACAAGCTGCATCAACTAATTCAAATTATGTAGATCAATACAATATTCCAGGTCATTTCGCGCCTATCGCTGACTTCGAGTTAGTAACTAAAGCTAAAAATGTCGCTGACCAAATCGGTGCTACTACACACGTAGGTAACGTATTATCTTCTGATACATTTTACAATGCCGATCCAACATTCAATGATGCTTGGAAAAAAATGGGTATTTTAGGTATCGAAATGGAATCAGCTGGTTTATATTTAA > USA300TCH1516_ALE/2255930‑2256207 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |