BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP000731	81	N→G	intergenic (–/‑151)	– / → repA	–/replication protein A

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP000731	81	0	N	G	99.2%	1719.8 / NA	487	intergenic (–/‑151)	–/repA	–/replication protein A
Reads supporting (aligned to +/- strand): ref base N (0/0); major base G (274/208); minor base A (1/3); total (276/211)
Fisher's exact test for biased strand distribution p-value = 3.21e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 487 total aligned reads displayed.

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTANAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATGGAAAGA  >  CP000731/1‑220

atatttatcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATATTAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGaa                                                                                                                                           >  1:225239‑M1/59‑141 (MQ=255)

atatttatcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGaa                                                                                                                                           >  2:170908‑M1/59‑141 (MQ=255)

  atttattaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAAc                                                                                                                                         >  2:565790‑M1/57‑141 (MQ=255)

  atttatcaagggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAAc                                                                                                                                         >  2:361598‑M1/57‑141 (MQ=255)

    ttatcaatggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTg                                                                                                                                       >  2:269696‑M1/55‑141 (MQ=255)

            ggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGtttattta                                                                                                                               >  1:529263‑M1/47‑141 (MQ=255)

            ggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGtttattta                                                                                                                               >  1:1052389‑M1/47‑141 (MQ=255)

            ggtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGtttattta                                                                                                                               >  2:161553‑M1/47‑141 (MQ=255)

             gtttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTttatttat                                                                                                                              <  2:327973‑M1/96‑1 (MQ=255)

              tttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTTGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTtata                                                                                                                             >  2:724657‑M1/45‑141 (MQ=255)

              tttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGtttatttatt                                                                                                                             <  1:792871‑M1/97‑2 (MQ=255)

               ttataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTtatat                                                                                                                            >  2:949580‑M1/44‑141 (MQ=255)

                 ataaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATCTATATaa                                                                                                                          <  2:488319‑M1/100‑1 (MQ=255)

                  taaacccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAAt                                                                                                                         <  1:719852‑M1/101‑1 (MQ=255)

                     acccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAAtttt                                                                                                                      >  1:994733‑M1/38‑141 (MQ=255)

                      cccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTc                                                                                                                     <  2:740150‑M1/105‑1 (MQ=255)

                      cccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTc                                                                                                                     <  2:597974‑M1/105‑1 (MQ=255)

                      cccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTc                                                                                                                     >  1:83288‑M1/37‑141 (MQ=255)

                       cgttgataaagctatattgtcccttgtataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCg                                                                                                                    >  2:776536‑M1/36‑141 (MQ=255)

                       ccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATGTATATAATTTTCg                                                                                                                    <  1:888573‑M1/106‑1 (MQ=255)

                       ccttgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACATAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCg                                                                                                                    >  2:1175487‑M1/36‑141 (MQ=255)

                          tgataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATa                                                                                                                 >  2:245009‑M1/33‑141 (MQ=255)

                            ataaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACt                                                                                                               >  1:1063585‑M1/31‑141 (MQ=255)

                             taaagctatattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACtt                                                                                                              >  2:938386‑M1/30‑141 (MQ=255)

                                    atattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtattat                                                                                                       >  1:195605‑M1/23‑141 (MQ=255)

                                    atattttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGtattat                                                                                                       >  2:916515‑M1/23‑141 (MQ=255)

                                       ttttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATtatata                                                                                                    <  2:577553‑M1/122‑1 (MQ=255)

                                        tttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAAATGTTTATTTATATCATTTTCGATCCTTGTATTATATaa                                                                                                   <  2:644767‑M1/123‑1 (MQ=255)

                                         ttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAAt                                                                                                  <  1:568331‑M1/124‑1 (MQ=255)

                                         ttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAAt                                                                                                  <  2:965820‑M1/124‑1 (MQ=255)

                                         ttcccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAAt                                                                                                  <  1:1031000‑M1/124‑1 (MQ=255)

                                           cccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGa                                                                                                <  2:890417‑M1/126‑1 (MQ=255)

                                           cccttttataagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGa                                                                                                >  2:804343‑M1/16‑141 (MQ=255)

                                                 gagaaggttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAataata                                                                                          <  2:12387‑M1/132‑1 (MQ=255)

                                                   taagtttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATc                                                                                        >  2:134937‑M1/8‑141 (MQ=255)

                                                       tttATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAg                                                                                    >  2:391442‑M1/4‑141 (MQ=255)

                                                       tttATTTAAAGTGCTATAATAAACTGAATATAACAAAAACCCCAACTACTCGTAATAGTCGGGTTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAAAGAATAATATCTTAg                                                                                    >  2:817682‑M1/4‑141 (MQ=255)

                                                       tttATTTAAAGTGCTATAATAAAATTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTATAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATTTCTtat                                                                                    <  2:855109‑M1/138‑2 (MQ=255)

                                                          aTTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGc                                                                                 >  1:375976/1‑141 (MQ=255)

                                                           tttAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCa                                                                                >  1:661967/1‑141 (MQ=255)

                                                           tttAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGATTAGAAAATGTTTATTTAAATAATTTTCGATGCTTGTATTATATAATGAATAATATCTTATTGCa                                                                                >  1:748847/1‑141 (MQ=255)

                                                              aatgTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGc                                                                             >  2:1033520/4‑141 (MQ=255)

                                                                aGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCAc                                                                           >  1:465679/1‑141 (MQ=255)

                                                                aGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCAc                                                                           >  1:556251/1‑141 (MQ=255)

                                                                 gTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCAcc                                                                          >  2:1121266/1‑141 (MQ=255)

                                                                      ataataAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAAt                                                                     >  1:952543/1‑141 (MQ=255)

                                                                       taataaACTTCATATAACAAACACCCCAACTACTGGTAATATTCGGGGTTTGGTAATAA‑AACCTTTAGAAACTGTTTCTTTATATAATTTTCGATCCTTATCTTCTATAATGAATAAAATCTTATTGCAAAGCCCTAAATc                                                                    >  2:232098/1‑141 (MQ=255)

                                                                          taaACTTAATATAAGAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCAtt                                                                 >  1:626004/1‑141 (MQ=255)

                                                                            agcTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATtaa                                                               <  2:985790/139‑1 (MQ=255)

                                                                               ttAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATtaaata                                                            <  2:87457/141‑1 (MQ=255)

                                                                               ttAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATtaaata                                                            >  2:882283/1‑141 (MQ=255)

                                                                                 aaTATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATtaaataaa                                                          >  1:1163613/1‑141 (MQ=255)

                                                                                  atatAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTaaataaat                                                         >  2:1159169/1‑141 (MQ=255)

                                                                                   tataACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATg                                                        <  1:12387/141‑1 (MQ=255)

                                                                                    ataACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTACATAACGAATAAAATCGGGGTGCAAGCACCTAAATCATTAAATAAATGt                                                       >  1:514368/1‑141 (MQ=255)

                                                                                     taACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTCGAAACTGTTTCTTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAGGCACCTAAATCCTTAAATAAATGTa                                                      >  1:244088/1‑141 (MQ=255)

                                                                                      aaCAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTaa                                                     <  1:212544/141‑1 (MQ=255)

                                                                                         aaaaaCCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGc                                                  >  1:328787/1‑141 (MQ=255)

                                                                                          aaaaCCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCGCCTAAATCATTAAATAAATGTAAAGCt                                                 >  2:539627/1‑141 (MQ=255)

                                                                                            aaCCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaa                                               <  1:393145/141‑1 (MQ=255)

                                                                                             aCCCCAACTGCTGGTAATAGTCGGGGTTTGGTAATTG‑GACTTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaa                                              >  1:874064/1‑141 (MQ=255)

                                                                                               cccAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaata                                            <  1:290518/141‑1 (MQ=255)

                                                                                                cgaaCTACTGGTAATAGTCGGGTTTTGGTAGTAC‑AGCGGTTAACAACTGTTTCTTTATATAATTTTCGATACTTGTATTATATAATGAAGAATATCTTAGGGCAAGCACCTAAATCATTAAATAAATGAAAAGCtaaataa                                           >  2:106514/3‑141 (MQ=255)

                                                                                                ccAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTAGATAATGAATCATATCTTAGTGCAAGCACCTAAATCATTAACTCGATGTCAAGCtaaatga                                           >  1:162339/1‑139 (MQ=255)

                                                                                                 cAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCtaaataaa                                          >  1:967493/1‑141 (MQ=255)

                                                                                                  aaCTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATaaaa                                         >  1:417505/1‑141 (MQ=255)

                                                                                                   actactGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATCTCTTAGTGCAAGCACCTAAACCATTAAATAAATGTAAAGCTAAATaaaaa                                        >  2:421086/1‑141 (MQ=255)

                                                                                                    ctactGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAAc                                       >  1:265159/1‑141 (MQ=255)

                                                                                                       ctGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGtt                                    <  1:1006926/141‑1 (MQ=255)

                                                                                                             aTAGTCGGGGTTTGGTAATAA‑AACGTTGAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTttatta                              <  2:619637/141‑1 (MQ=255)

                                                                                                              tAGTCGGGGTTTGGTAATCACTACG‑TAGGGGACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTAc                             >  1:1183226/1‑141 (MQ=255)

                                                                                                              tAGTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTttattgc                             >  1:1012885/1‑139 (MQ=255)

                                                                                                              tAGTCGGGGTTTGGTAATAA‑AACGTGTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTAc                             >  1:915152/1‑141 (MQ=255)

                                                                                                                gacGGGCTCTGGTAATAA‑AACGTTTAGAAACTCTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACct                           <  1:307687/139‑1 (MQ=255)

                                                                                                                gTCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACct                           <  1:488727/141‑1 (MQ=255)

                                                                                                                 tCGGGGTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAACCAACTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACctc                          <  1:819945/141‑1 (MQ=255)

                                                                                                                 gcGGGTTTTGGTAATAA‑TACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACctc                          <  2:558677/140‑1 (MQ=255)

                                                                                                                     ggTTTGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTAc                      <  1:435425/141‑1 (MQ=255)

                                                                                                                      cttggataataa‑ATGGTTTAGAAACTGTTTATTTATATAATTGTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTAcc                     <  1:113194/135‑1 (MQ=255)

                                                                                                                        ttGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCaa                   >  2:1007884/1‑141 (MQ=255)

                                                                                                                         tGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGGTACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCaaa                  >  1:932017/1‑141 (MQ=255)

                                                                                                                         tGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCaca                  >  2:679537/1‑139 (MQ=255)

                                                                                                                         tGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCaaa                  >  1:1091259/1‑141 (MQ=255)

                                                                                                                         tGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCaaa                  >  2:21915/1‑141 (MQ=255)

                                                                                                                         tGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCaaa                  >  1:150551/1‑141 (MQ=255)

                                                                                                                         tGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTGATTACCTCTTACCaaa                  <  1:595717/141‑1 (MQ=255)

                                                                                                                         tGGTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTGCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCaaa                  <  2:479485/141‑1 (MQ=255)

                                                                                                                         tGGTAATAA‑AACGTTTAGAAACTGTTTATGTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCaaa                  >  1:698959/1‑141 (MQ=255)

                                                                                                                          ggTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAAc                 <  2:192933/141‑1 (MQ=255)

                                                                                                                          ggTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATAGCTTAGTACAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGATTTATTACCTCTTACCAAAc                 >  2:301605/1‑141 (MQ=255)

                                                                                                                           gTAATAA‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACt                <  1:905069/141‑1 (MQ=255)

                                                                                                                             aataa‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTaa              <  2:705492/141‑1 (MQ=255)

                                                                                                                              ataa‑AACGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTaaa             <  1:448638/141‑1 (MQ=255)

                                                                                                                                aa‑aaCGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAat           <  2:343388/141‑1 (MQ=255)

                                                                                                                                     cGTTTAGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATgg       >  2:1079752/1‑141 (MQ=255)

                                                                                                                                          aGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATGGAAaga  >  1:509753/1‑141 (MQ=255)

                                                                                                                                          aGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATGGAAaga  >  2:445680/1‑141 (MQ=255)

                                                                                                                                          aGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATGGAAaga  >  1:616013/1‑141 (MQ=255)

                                                                                                                                          aGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATGGAAaga  <  1:72253/141‑1 (MQ=255)

                                                                                                                                          aGAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATGGAAaga  >  2:504545/1‑141 (MQ=255)

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATTTAAAGTGCTATAATAAACTTAATATAACAAAAACCCCAACTACTGGTAATAGTCGGGGTTTGGTAATAA‑AACGTTTANAAACTGTTTATTTATATAATTTTCGATACTTGTATTATATAATGAATAATATCTTAGTGCAAGCACCTAAATCATTAAATAAATGTAAAGCTAAATAAAAACGTTTTATTACCTCTTACCAAACTAAAATATGGAAAGA  >  CP000731/1‑220

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`