| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 2,279,705 | G→A | 100% | A943V (GCA→GTA) | ebh_3 ← | Extracellular matrix‑binding protein ebh |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 2,279,705 | 0 | G | A | 100.0% | 173.8 / ‑6.5 | 67 | A943V (GCA→GTA) | ebh_3 | Extracellular matrix‑binding protein ebh |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (33/32); minor base C (0/1); total (33/34) | |||||||||||
| Rejected as polymorphism: E-value score below prediction cutoff. | |||||||||||
| Rejected as polymorphism: Frequency below/above cutoff threshold. | |||||||||||
| Rejected as polymorphism: Variant not supported by required number of reads on each strand. | |||||||||||
TGTGCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTGCTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGA‑TACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGC > USA300TCH1516_ALE/2279569‑2279838 | tgtgCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACtg < 2:450492/140‑1 (MQ=255) tgCGGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACtgtt < 2:483002/140‑1 (MQ=255) cGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTgttgtt > 1:376748/1‑140 (MQ=255) attaGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCTTTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCAc < 1:599356/140‑1 (MQ=255) attaGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGTATCTGCATTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCAc < 1:465144/140‑1 (MQ=255) attaGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCAc < 2:661985/140‑1 (MQ=255) gTTGATTCTACTTCTGGTTTACTAGTTACACCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTCGAATTGTTATTTGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGt < 1:498106/140‑1 (MQ=255) ttGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGATTGTTTTTAGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGtt > 1:422013/1‑140 (MQ=255) ttGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATCCATCTACACTAGAATTGTTATTAGCTTGCGATTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGtt > 1:587521/1‑140 (MQ=255) tCTAGTTCTGGTTTACTAGTTACATCGTTATCCATTTTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGc < 2:393594/140‑1 (MQ=255) tactacTGGTTTGCTAGTTACATCGCTATCCATTGTCGGACTGTTTCTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCAACATCACTTGC‑TGATGTTACTGTTGTTTGACCTGTTGCCGCAt > 1:470086/1‑140 (MQ=255) tACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAAAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCAt > 1:365239/1‑140 (MQ=255) cTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATAATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCa > 1:128431/1‑140 (MQ=255) tGGTTTACTAGTTACATTGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACTCTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACGGTTGTTTCACCTGTTGCCGCATCACtat < 1:127192/140‑1 (MQ=255) tGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATTCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCTTCACtat > 1:243800/1‑140 (MQ=255) tGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACtat > 2:155123/1‑140 (MQ=255) tGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATAACtat > 1:243953/1‑140 (MQ=255) ggTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTAAACTAGCATTGTTATTAGCTGGCGGATTAGCATTGGCATCATCAGTTGC‑TGATGTTACTGTTGTTTGACCTGTTGCCGCATCACtatt > 1:461028/1‑140 (MQ=255) tgcgaGTTAGATCGTTATCCATTTTCGTGCTTGTTGTTTTATCATCTACTCTTGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTAGTAttt < 2:339299/136‑1 (MQ=255) aCTAGTTACATCGTTATCCGTTGTCGGACTGTTTGTTGATGCATGTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTg > 1:364991/1‑140 (MQ=255) aCTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACAAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTg > 1:231796/1‑140 (MQ=255) tCGTTATCCATTGTCGGACTGTTTGTTGATACATATACAATAGAATTGTTATTAGATTGAGGTTTATCTTTTGCATCATAAGTTCA‑TGATGGGACGGTTTTTTCACCTGTGGCCGCATCACTATTATTTGGTGTTGTCgg > 2:157253/1‑140 (MQ=255) gTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTTTCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGgag < 1:64996/140‑1 (MQ=255) gTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGgag < 1:612229/140‑1 (MQ=255) ccATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCg > 1:254945/1‑140 (MQ=255) ccATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCg > 2:574407/1‑140 (MQ=255) ttGTCGGACTGTTTGTTGCTGCATCTACACTTGAATTGTTATTAGCTTGCGGTTTTTCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCt < 2:509548/140‑1 (MQ=255) gTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCGTCGCTATTATTTGGTGTTGTCGGAGAAGCGTCTGc > 2:15877/1‑140 (MQ=255) gTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACGATTATTTGGTGTTGTCGGAGAAGCGTCTGc > 1:256342/1‑140 (MQ=255) ggACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTCTTATTTGGTGTTGTCGGAGAAGCTTCGGCttt > 2:175413/1‑140 (MQ=255) ggACTGTTTGTTGATGCAAATACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTACCCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAACGACTgacct > 2:289381/1‑136 (MQ=255) gACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTg < 1:535978/140‑1 (MQ=255) gACGGTTTGTTGTTGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTg < 2:372609/140‑1 (MQ=255) gACCGTTTGTTGAAGCATCTACACTAACATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATAATTTGGAGTTGTCGGAGAAGCGTCTGCTTTg < 1:209178/140‑1 (MQ=255) aCTTTTTGTTGATTCATCTATACTAGTATTTTTTTTAGTTTGCTGTTTATCTTTTGCATCTTCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGc < 1:124762/140‑1 (MQ=255) cTGTTTGTTGATGCATCTTCACTAGAATTGTTATTAGCTTGCGGTTTATCCTTTGCATAATCAGTTAC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGACTGCTTTGcc > 1:249960/1‑140 (MQ=255) gttttttGATGCATCTACACTAGAATTGTTATTAGCTTGCTGTTTGTCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTGTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCAt < 1:299529/140‑1 (MQ=255) tttgttGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGAGGAAGCGTCTGCTTTGCCAtt > 2:415938/1‑140 (MQ=255) tgttgATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTATTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAg > 1:230063/1‑140 (MQ=255) tttgATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGc < 2:227076/139‑1 (MQ=255) gttgATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGc < 2:376748/140‑1 (MQ=255) gCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTgtcgt > 2:414364/1‑140 (MQ=255) gCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTgtcgt > 2:612339/1‑140 (MQ=255) gCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCACTAGCTgtcgt > 2:271909/1‑140 (MQ=255) cTACACTAGAATTGTTATTAGCTTGCGGTTTATCATATGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGATACGGCATCACCATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCa > 1:484569/1‑140 (MQ=255) acTTGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGA‑Ta < 1:379468/140‑1 (MQ=255) acTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATAACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCAGTCGTCTCAGA‑Ta < 1:639140/140‑1 (MQ=255) cTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGA‑TAc < 1:388850/140‑1 (MQ=255) aTTGTTATTAGCTTGCGGTTTATCTTTTGCATTATTAGTTGC‑TGTTGTTAATGTTGTTTCAGATGTTGCCGCATCACTATTATTTGGTGTTGTGGGGGAAGGGTCTGCTTTGCCATTAGCTGTGGTTTCTGA‑TAGGttgg > 1:12932/1‑138 (MQ=255) tattaGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGA‑TACGTTAGGTTGt > 2:293910/1‑140 (MQ=255) ttaGCTTACGGATTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTTACCTGTTGCCGCATCTCTATTATTTGGTGTTTTCGGATAAGCGCATGCTTTGCCATTAGCTGTCGTTTCAGA‑TACGTTAGTTTGttc > 2:244836/1‑138 (MQ=255) tggttGCGGGTTATCATTTGCATCATCAGTTAC‑TGATGTCAGTTTTTGTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTTGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGA‑TACGTTAGGTTGTCCAg < 2:138610/137‑1 (MQ=255) ggTTTATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGA‑TACGTTAGGTTGTCCAGTATTTTc > 1:130655/1‑140 (MQ=255) ttATCATTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATAACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGA‑TACGTTAGGTTGTCCAGTATTTTCTgg > 1:34575/1‑140 (MQ=255) tATCATTTGCATCATCAGCTGCATGCTG‑GACTGTTGTTTCACCTGTTGCCGCATCACAATTATTTGGAGTAGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGA‑TACGTTAGGTTGTCCAGTATATTCTGgt > 1:160035/1‑140 (MQ=255) aTTTGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCAGCATTACTATTATTTGGTGTTGTCGGAGCAGAGCCGGCTGAGGGTTTAGTTGTCGT‑AAAGAGCACGTTAGGTTGTCCAGTATTTTCGGGTGTTg < 2:470086/140‑1 (MQ=255) tttGCATCATCAGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGA‑TACGTTAGGTTGTCCAGTATTTTCTGGTGTTGc < 1:42297/140‑1 (MQ=255) gCATCCTCAGTTGC‑TGATGTTATTGTTGTTTCACTGGTTGCCTCCTCCCGATTATTTGGTTTTGTCGGAGAAGCTCCTGCTTTGCCATTAGCTGTCGTCTCAGA‑TACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCAtt < 2:202784/140‑1 (MQ=255) catcctCTGGTGC‑TGATGTTTCTGTGGTTTCCCCTGTTGCCGCATCACTGTTATTTGGTGTTGTCGGAGTAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGA‑TACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTa < 2:587521/140‑1 (MQ=255) atcaGTTGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGA‑TACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCAt > 1:288551/1‑140 (MQ=255) tcaGTTGC‑TTATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTTCCATTAGCTGTCGTCTCAGA‑TACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCAtt < 1:171411/140‑1 (MQ=255) aGTTGC‑TGATGTTACTGTTGTTTCAGCTGTGGTCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGTTTTGCCATTAGCTGTCGTCTCAGA‑GACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTg < 1:635154/140‑1 (MQ=255) tGC‑TGATGTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGA‑TACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAAt < 2:652206/140‑1 (MQ=255) gC‑TTATTTTACTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGTCATTAGCTGTCGTCTCAGA‑TACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAAtt < 1:257967/140‑1 (MQ=255) gC‑TTATGTTACTGTTGTTTCACCTTTTGCCGCAGCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGA‑TACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAAtt < 1:392008/140‑1 (MQ=255) gctGTTACGGTTGTTTCACCTGTTGCCGCATCCCTATTTTTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGA‑TACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAACTTGc < 1:452938/138‑1 (MQ=255) gATGTTCCTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGA‑TACGCTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGc < 2:602648/140‑1 (MQ=255) | TGTGCCGTTATTAGTTGATTCTACTTCTGGTTTACTAGTTACATCGTTATCCATTGTCGGACTGTTTGTTGATGCATCTACACTAGAATTGTTATTAGCTTGCGGTTTATCATTTGCATCATCAGTTGC‑TGATGTTGCTGTTGTTTCACCTGTTGCCGCATCACTATTATTTGGTGTTGTCGGAGAAGCGTCTGCTTTGCCATTAGCTGTCGTCTCAGA‑TACGTTAGGTTGTCCAGTATTTTCTGGTGTTGCATTAGCATTTGAATTTGC > USA300TCH1516_ALE/2279569‑2279838 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |