Predicted mutation
evidence seq id position mutation freq annotation gene description
JC CP000731 6,552 +TCTCCAGGCACTTGTGCATATTCTGAAA 100% intergenic (+1069/‑419) cadX → / → USA300HOU_pUSA300HOUMR0010 cadmium efflux regulator/MarR family transcriptional regulator

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP000731 = 65520 (0.000)203 (0.870)
+TCTCCAGGCACTTGTGCATATTCTGAAA
108/204 NT 100% intergenic (+1069/‑419) cadX/USA300HOU_pUSA300HOUMR0010 cadmium efflux regulator/MarR family transcriptional regulator
?CP000731 6553 = 0 (0.000)intergenic (+1070/‑418) cadX/USA300HOU_pUSA300HOUMR0010 cadmium efflux regulator/MarR family transcriptional regulator

Only 100 of 330 total aligned reads displayed.

ACACTAAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000731/6413‑6552
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTACACCG  >  CP000731/6553‑6692
                                                                                                                                            ||||||||||||||||||||||||||||                                                                                                                                            
 CACTAAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTCAATAGACATTTCTTGGGGAATAGGAACAATCCACTC                                                                                                                                                                        <  1:430599/141‑1
     AAAATTTCAGGTTGTGCTTTGGTATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCA                                                                                                                                                                    >  1:782954/1‑141
     AAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGGATAGGAACAATCCACTCTCCA                                                                                                                                                                    >  1:113122/1‑141
     AAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAGCAATCCACTCTCCA                                                                                                                                                                    >  1:211884/1‑141
      AAATATCAGGTTGTGATTTGATATTCATTCGATATTTTTCTTGTTTTTTAATTGATAATGCTGCCGTAAAACTGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAt                                                                                                                                                                   >  2:479379/1‑140
       aagtttAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGG                                                                                                                                                                  <  2:501700/135‑1
           TCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACT                                                                                                                                                              >  2:578405/1‑141
            CAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTT                                                                                                                                                             <  1:493400/141‑1
               GTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTG                                                                                                                                                          >  2:138592/1‑141
                TTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGC                                                                                                                                                         >  1:117787/1‑141
                TTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGC                                                                                                                                                         <  2:220639/141‑1
                TTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGATGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGTACAATCCACTTTCCAGGCACTTTTGa                                                                                                                                                         >  1:275950/1‑140
                 TGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTCTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCA                                                                                                                                                        >  2:676637/1‑141
                        TGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCCCTCTCCAGGCACTTGTGCATATTCTG                                                                                                                                                 >  1:36314/1‑141
                        TGATATTCATTCCATATTTTCCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTG                                                                                                                                                 <  1:14289/141‑1
                        TGATATTCACTCCACATTTCTCTATTACAAAAATTGATAATGCTCCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGTCACTTGTTCATATTCTG                                                                                                                                                 <  1:197240/141‑1
                          ATATCCATCCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAA                                                                                                                                               <  1:101000/141‑1
                            ATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAA                                                                                                                                             <  1:578792/141‑1
                             TTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAAT                                                                                                                                            <  2:643560/141‑1
                              TCATTCCATGTTGGTCGAGGTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATC                                                                                                                                           >  2:660959/1‑141
                               CATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCC                                                                                                                                          >  1:718990/1‑141
                                ATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCA                                                                                                                                         <  1:557814/141‑1
                                    CATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTG                                                                                                                                     >  1:524687/1‑141
                                       tTTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTAT                                                                                                                                  <  1:399363/140‑1
                                       tTTTTCCTAGTTCAATAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTAT                                                                                                                                  <  2:322475/140‑1
                                       ATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTAT                                                                                                                                  >  2:694189/1‑141
                                       ATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTAT                                                                                                                                  <  2:86053/141‑1
                                           TTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGT                                                                                                                              <  2:593604/141‑1
                                             CTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCTTAGACTCTTTAATCGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCA                                                                                                                            <  1:391036/141‑1
                                             CTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCACATCCCATAGACTCTTTAATAGATATCTTTGGGTGCATCCTTACTTTCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCA                                                                                                                            <  1:379066/141‑1
                                              TAGTTCAAAAATTGATAATGCTGCCGTAGAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCGCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCAC                                                                                                                           <  1:447408/141‑1
                                                GTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAAAAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCAACTGTATGGGTCAAGC                                                                                                                         >  1:455692/1‑141
                                                GTTCAAAAATTGATAATGCTGCCGTAAAACAGGCTGTGCCCTATACCATAGACTCTTTAATAGACGTTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCCTCTTCTGAAAATCCACCTGTATGTGTCACGC                                                                                                                         >  1:129724/1‑141
                                                   CAAAAAGTAATCATGCGCCCTCAAACCCTGCTGTCCCATATACCATAGCCTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTCTGCATATTCTGAAAATCCACCCGTATGTGTCACGCCAA                                                                                                                      <  2:392772/141‑1
                                                    AAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACGATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAGCAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAAC                                                                                                                     >  1:652901/1‑141
                                                    AAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAAC                                                                                                                     <  1:711085/141‑1
                                                    AAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAAC                                                                                                                     <  1:70570/141‑1
                                                       AATTGATAATGCTGCCGTAAAACCGTCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATC                                                                                                                  <  2:752641/141‑1
                                                         tggagAATGCTGCCGCAAAACCGGCTGTGCCATATCCCCTAGACTCTTTAATAGGCATTTCGTGGGGAATAGGAACAAGCCACTCTCCAGGCACTTGTGCATATTCTGAAAAGCCACCTGTATGTGTCACGCCAACATCAT                                                                                                                <  2:265083/136‑1
                                                          TGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGCCTCTTTAATCGACATTTCTTGGGGAGTAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATA                                                                                                               <  1:537042/141‑1
                                                          TGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATA                                                                                                               >  1:625306/1‑141
                                                          TGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATA                                                                                                               <  1:729057/141‑1
                                                             TAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGAACGTGGGCATCTTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACC                                                                                                            <  1:186623/141‑1
                                                              AATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCA                                                                                                           <  2:735097/141‑1
                                                                 GCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTA                                                                                                        <  2:100162/141‑1
                                                                       GTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATATCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGGAGATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAAT                                                                                                  >  2:433699/1‑141
                                                                        TAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATA                                                                                                 >  2:285451/1‑141
                                                                        TAAAACCCGCTGTGCCAGACACCAAAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCCCTTGTGCATACTCTGCAAACCCCCCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATA                                                                                                 <  2:517829/141‑1
                                                                         AAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATAC                                                                                                >  1:766930/1‑141
                                                                         AAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATAC                                                                                                <  2:697492/141‑1
                                                                           AACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACAT                                                                                              >  2:338734/1‑141
                                                                           AACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTACCGACAACTTCATAACCCGTCACTcgaacct                                                                                              >  1:357262/1‑134
                                                                                 CTGGGCCATATACCATAGACTCTTTAATATACATTCCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCCCCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGC                                                                                        <  1:262757/141‑1
                                                                                  TGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCC                                                                                       <  1:301575/141‑1
                                                                                   GTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCT                                                                                      >  2:626307/1‑141
                                                                                   GTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCT                                                                                      >  2:549646/1‑141
                                                                                   GTGCCATATACCATAGACTCATTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCT                                                                                      >  1:660988/1‑141
                                                                                          ATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAA                                                                               <  1:441490/141‑1
                                                                                             CCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACT                                                                            >  1:639599/1‑141
                                                                                                  GACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCA                                                                       >  1:54056/1‑141
                                                                                                    CTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATT                                                                     >  1:691252/1‑141
                                                                                                     TCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTC                                                                    <  2:368807/141‑1
                                                                                                      CTTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCG                                                                   >  1:367235/1‑141
                                                                                                       TTTAATAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGA                                                                  <  2:180477/141‑1
                                                                                                          AATAGACATTTCTTGGGGAATAGGAACCATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACT                                                               <  2:10958/141‑1
                                                                                                          AATAGACATTTCTTGGGGAACAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCCGTATGTGTCACGCCAACATCACAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATGCGAACT                                                               <  1:655483/141‑1
                                                                                                            TAGACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCTTAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATAATTCGAACTTG                                                             >  1:611615/1‑141
                                                                                                              GACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGAT                                                           <  2:598689/141‑1
                                                                                                              GACATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAAATTGAT                                                           >  2:412245/1‑141
                                                                                                                CATTTCTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTC                                                         >  2:240854/1‑141
                                                                                                                   tgcgTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAAC                                                      <  2:630928/137‑1
                                                                                                                     CTTGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAA                                                    >  2:667661/1‑141
                                                                                                                       TGGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATA                                                  >  1:59396/1‑141
                                                                                                                        GGGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATAC                                                 <  1:208636/141‑1
                                                                                                                         GGGAATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACC                                                <  2:117853/141‑1
                                                                                                                           GAATAGTAACAATCCACTCGCCAGGCACTTGTGCACATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTG                                              <  2:524687/141‑1
                                                                                                                             ATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCA                                            >  2:596465/1‑141
                                                                                                                             ATAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCA                                            >  1:35119/1‑141
                                                                                                                              TAGGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAACATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAA                                           <  1:256981/141‑1
                                                                                                                                GGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCCGTACCTACGACATGCCCGCCGGCGTCAAACTTATCATTCGAACTTGATCCAACAATACCTGCAAAA                                         >  2:555472/1‑141
                                                                                                                                GGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAA                                         <  2:425393/141‑1
                                                                                                                                GGAACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTCCTTTAAACTTATCATTCGAACTTGATTCAACAAAACCTGCAAAA                                         >  2:385359/1‑141
                                                                                                                                   ACAATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCT                                      >  1:84673/1‑141
                                                                                                                                      ATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATA                                   <  2:715573/141‑1
                                                                                                                                      ATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATA                                   <  1:453407/141‑1
                                                                                                                                      ATCCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATGATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATA                                   <  1:475071/141‑1
                                                                                                                                        CCACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACC                                 <  2:420544/141‑1
                                                                                                                                         CACTCTCCAGGCATTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAACACCTGCAAAATCTATACCA                                <  1:420380/141‑1
                                                                                                                                          ACTCTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCcg                               >  1:323946/1‑139
                                                                                                                                             CTCCAGGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAA                            >  1:243559/1‑141
                                                                                                                                             CTCCAGGCACTTGTGCATATTCTGAAAATCCAACTGTATGTGTCCCGCAAACATCAAAACAAGTAAATAATACATTAACGCCTTATTTTAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACTAGGAA                            >  2:114572/1‑141
                                                                                                                                                 AGGCACGTGTGCACATTCTGAAAATCCACCTTTATGTGTCACGCAAACATCATATCCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCAT                        <  1:21884/141‑1
                                                                                                                                                  GGCACTTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACAAGGAATCATA                       >  2:32928/1‑141
                                                                                                                                                  GGCACTTGTACATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTCCTTTAAACTTAACATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATA                       <  2:361988/141‑1
                                                                                                                                                    CACTTGTGCAGATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGG                     <  2:455657/141‑1
                                                                                                                                                       TTGTGCATATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGCAATCATAGGATA                  >  1:699241/1‑141
                                                                                                                                                              TATTCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTA           <  1:631709/141‑1
                                                                                                                                                               ATTCTGAACATCCACCTGTATTTGTCACGCCAACATCATAACCAGTAACTAATACCTTATCTCCTTCTTTAAACTTATCATTCTAACGTGATTCAACAATACCTGCAACATCTATCCCAGGAATCATAGGATAATCTCTAA          <  2:14544/141‑1
                                                                                                                                                                 TCTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATT        <  2:779741/141‑1
                                                                                                                                                                  CTGAAAATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTA       <  2:615059/141‑1
                                                                                                                                            ||||||||||||||||||||||||||||                                                                                                                                            
ACACTAAAATTTCAGGTTGTGATTTGATATTCATTCCATATTTTTCTAGTTCAAAAATTGATAATGCTGCCGTAAAACCGGCTGTGCCATATACCATAGACTCTTTAATAGACATTTCTTGGGGAATAGGAACAATCCAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  CP000731/6413‑6552
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ATCCACCTGTATGTGTCACGCCAACATCATAACCAGTAACTAATACATTATCGCCTTCTTTAAACTTATCATTCGAACTTGATTCAACAATACCTGCAAAATCTATACCAGGAATCATAGGATAATCTCTAATTACACCG  >  CP000731/6553‑6692

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.