| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | USA300TCH1516_ALE | 1,516,802 | A→T | 9.0% | intergenic (‑8/+6) | gpsB ← / ← USA300HOU_RS07400 | Cell cycle protein GpsB/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | USA300TCH1516_ALE | 1,516,802 | 0 | A | T | 9.0% | 178.0 / 2.2 | 71 | intergenic (‑8/+6) | gpsB/USA300HOU_RS07400 | Cell cycle protein GpsB/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base A (26/37); new base T (5/2); total (32/39) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.28e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TTTTTTGATAATCAGCAATAATGTCATCTAAAAATGCATCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAGTTTGTTTTATCCATAAAATCAACTAACATCTGCTTGAAGAACTTAGGACTCGC > USA300TCH1516_ALE/1516662‑1516942 | ttttttGATAATCAGCAATAATGTCATCTAAAAATGCATCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATCAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCa > 1:480005/1‑141 (MQ=255)ttttttGATAATCAGCAATAATGTCATCTAAAAATGCATCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCa > 1:790212/1‑141 (MQ=255) tGATAATCAGCAATAATGTCATCTAAAAATGCATCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCa > 1:239762/1‑141 (MQ=255) aTAATCAGCAATAATGTCATCTAAAAATGCATCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCAtt < 2:375956/141‑1 (MQ=255) aTCAGCAATAATGTCATCTAAAAATGCATCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATGTCAATGAAACATCTGACATTTTTTCCACCTCATTAGa < 2:395011/141‑1 (MQ=255) aGCAATAATGTCATCTAAAAATGCATCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAAc < 1:711035/141‑1 (MQ=255) aGCAATAATGTCATCTAAAAATGCATCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAAc > 1:603149/1‑141 (MQ=255) tttatttAAAAATGCATCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCtt < 1:269369/135‑1 (MQ=255) gTCATCTAAAAATGCATCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCtt < 1:143775/141‑1 (MQ=255) aTCTAAAAATGCATCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAg > 1:429455/1‑141 (MQ=255) aaaaaTGCATCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCa < 2:180108/141‑1 (MQ=255) acaaTGCAGCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATCTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCAc < 2:210138/139‑1 (MQ=255) aaaTGCATCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACt > 1:128300/1‑141 (MQ=255) aTGCATCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCCGACCACTGt > 2:64950/1‑141 (MQ=255) gCATCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTaa < 2:753355/141‑1 (MQ=255) aTCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTTTTTTTTTTTTTCATAAAAAGCTGTTGCTGATAATTTTAATGAAACATCTGACATTTTTTCGTGTTCTTTAGAAACTTTGAAATTCAAACCACTGttatt > 2:165216/1‑137 (MQ=255) ttACTGCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCa < 2:142385/140‑1 (MQ=255) cTACTTCTTCTCTTCTATAGTCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCa < 2:428388/141‑1 (MQ=255) ttcttcTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATtga < 1:442790/141‑1 (MQ=255) tcttctcttcTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATtgat < 2:654044/141‑1 (MQ=255) tcttctATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGCAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTgatggatg > 1:68756/1‑141 (MQ=255) tcttctATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCCCCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATg > 1:91487/1‑141 (MQ=255) tctATAGCCACGAGCCATCGTTTTTTGAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTCATGAATGCTg < 1:578045/141‑1 (MQ=255) aGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAAt < 1:40768/141‑1 (MQ=255) aGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAAt > 1:164743/1‑141 (MQ=255) aGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTAATTTTATGCTTGGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAAt < 1:742392/141‑1 (MQ=255) gCCACGAGCCATCGTTTTTTCAATATCTTTTTCATAAATATCTTCTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATCAGAAACTTTGATCTTCACACCACTGTAACTCATTTATGAATGCTGTTAAtt > 2:122049/1‑141 (MQ=255) cGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATc < 1:385971/141‑1 (MQ=255) cGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTCTGATCTTCAGACCACTGTAAGTCATTGATGAATTCTGTTAATTCATc > 1:594621/1‑141 (MQ=255) gAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTCTAAGTCATTGATGAATGCTGTTAATTCCTCg > 1:16457/1‑141 (MQ=255) ggCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGGTAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAAGTTGGGTGGTGGGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGa < 2:2632/140‑1 (MQ=255) aGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGTTGAATGCTGTTAATTCATCGa > 1:460808/1‑141 (MQ=255) aGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGGATGCTGTTAATTCATCGa > 1:35806/1‑141 (MQ=255) gCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGaa > 2:253304/1‑141 (MQ=255) gCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGaa > 1:753588/1‑141 (MQ=255) ccATCGTTTTTTTTTTTTTTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTCGAAACTTTGATCTTCAGACCACTTTTATTCTTTTTTGTTTGCTGTTAATTCATCGAAc > 2:430674/1‑141 (MQ=255) gagcGTGTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACg < 1:176132/138‑1 (MQ=255) cATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACg < 1:109217/141‑1 (MQ=255) aTCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGt > 1:308208/1‑141 (MQ=255) aTCGTTTTTTCAAAATCTTTTTCATAAATAACTTTTGCTGATAATTTCAATGTAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGt < 2:495035/141‑1 (MQ=255) cGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTca < 2:207171/141‑1 (MQ=255) ttttttCAAATTCTGTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTcaca < 2:632068/141‑1 (MQ=255) ttttttCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTcaca < 2:73777/141‑1 (MQ=255) tttttCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACaa < 1:9027/141‑1 (MQ=255) tttCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAata < 1:475594/141‑1 (MQ=255) cAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCGGACCACTGTAAGTCATTGCTGAATGCTGTTAGTTCATCGAACGTCAACATATcc > 1:67607/1‑140 (MQ=255) cTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGta < 2:430204/141‑1 (MQ=255) ttttCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTTTTTTTTTTTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTGATCGAACCTCACATTATCACAAGtttt > 2:600017/1‑138 (MQ=255) tttCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCTAACGTCACAATATCACAAGTATAg > 1:749414/1‑141 (MQ=255) ttCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTTTTTTTTTTTTTAAACTTTGATCTTCAAACCACTTTAAGTCATTGATGAATGCTGTTAATTCATCGATCGTCCCCCTATCACAAGtttact > 2:745551/1‑139 (MQ=255) ttCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACTTCACAATACCACAAGTATAgt > 1:656787/1‑141 (MQ=255) ttCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAgt < 2:621978/141‑1 (MQ=255) aTAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAgtttt > 1:443315/1‑140 (MQ=255) aaaTATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAgtttgtt < 1:386978/141‑1 (MQ=255) tCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCGTATAGGACACGTTGGTCGTCATAGCACTATAAGAAATTGATGAATGTTGTTTATTCATTGAACGTCACAATATCACAGGGATAGTTTGTTTTATc > 2:44006/1‑141 (MQ=255) tttttGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAGTTTGTTTTATcc < 2:271227/140‑1 (MQ=255) cTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTTTTTTTTTTTTGAAAATTTGATCTTCAGACCACTGTAAGGCATTGATGAGTGTTGTTAATTGTTCGCACCTCACAATATCAACAGTATAGTTTGTTTTaact > 2:177189/1‑138 (MQ=255) cTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAACCTTTGATTTTCAGACCACTGTAAGTCATTGATGAATGCAGTTAATTCATCGAACGTCACAATATAACAAGTCAAGTTTGGTTTCTcc > 2:635639/1‑141 (MQ=255) cTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAGTTTGTTTTATCCATaaaa > 1:76325/1‑141 (MQ=255) tGATAATTTCAATGAAACATCTGACATTTTTTTTTTTTTTTTTTAAACTTTGATCTTCAGACCACTTTAATTGATTGATGGATGTTGTTACTTTTTCGCTTGTCACATTTTCTCTAGTATATTTTGTTTTATCCTTAAAAt > 2:19631/1‑141 (MQ=255) aTTTCAATGAAACATCTGACATTTTTTCCTCCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAGTTTGTTTTATCCATAAAATCAACt < 2:472065/141‑1 (MQ=255) aTTTCAATGAAACATCTGACATTTTTTCCAGCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAGTTTGTTTTATCCATAAAATCAACt < 2:500387/141‑1 (MQ=255) ttCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAGTTTGTTTTATCCATAAAATCAACTaa > 2:66238/1‑141 (MQ=255) aTGAAACATCTGACATTTTTTCCAGCTGATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCAAAAGTATAGTTTGTTTTATCAATACAATCAACTAACATc > 2:559958/1‑141 (MQ=255) gAAACATCTTACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAGTTTGTTTTATCCATAAAATCAACTAACATCTg < 2:270132/141‑1 (MQ=255) aaaCATCTGACATTTTTTCCTCCTCATTAGATACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGACCGTCTCAATATCACAAGTATAGTTTGTTTTATCCATAAAATCAACTAACATCTGc < 2:86951/141‑1 (MQ=255) aaCATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAGTTTGTTTTATCCATAAAATCAACTAACATCTGCt > 1:463772/1‑141 (MQ=255) aaCATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAGTTTGTTTTATCCATAAAATCAACTAACATCTGCt < 1:138666/141‑1 (MQ=255) aaCATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACAGTAAGTCATTGACGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAGTTTGTTTTATCCATAAAATTAACTAACATCTGCt < 2:539080/141‑1 (MQ=255) cATCTGACCTTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAGTTTGTTTTATCCATAAAATCATCTAACATCTGCTTg < 1:436539/141‑1 (MQ=255) cttctttCCACCTCATTAGCAACTTTGATCTTCAGACCACTGTAAGTCATTGTTGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAGTTTGTTTTATCCATAAAATCAACCAACATCTGCTTGAAGAACtt < 2:451938/137‑1 (MQ=255) ttttCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAGTTTGTTTTATCCATAAAATCAACTAACATCTGCTTGAAGAACTTAgg < 1:125662/141‑1 (MQ=255) tctCCACCTCATTAGAAACTTTTATCTTCAGCCAACTGTAGATCTTTAATTTCTCCTGCTAATTCTCCGCATTTCTCATTATTACAATTATAGTTTGTTTTATCCGTAAAATCAACTAACATTTGTTTTAAAAACTTAGGa < 2:86192/139‑1 (MQ=255) aCCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAGTTTGTTTTATCCATAAAATCAACTAACATCTGCTTGAAGAACTTAGGACTCGc < 1:430674/141‑1 (MQ=255) | TTTTTTGATAATCAGCAATAATGTCATCTAAAAATGCATCTACTTCTTCTCTTCTATAGCCACGAGCCATCGTTTTTTCAAAATCTTTTTCATAAATATCTTTTGCTGATAATTTCAATGAAACATCTGACATTTTTTCCACCTCATTAGAAACTTTGATCTTCAGACCACTGTAAGTCATTGATGAATGCTGTTAATTCATCGAACGTCACAATATCACAAGTATAGTTTGTTTTATCCATAAAATCAACTAACATCTGCTTGAAGAACTTAGGACTCGC > USA300TCH1516_ALE/1516662‑1516942 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |