| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | CP000731 | = 2352 | 341 (1.230) | 7 (0.010) | 4/274 | 29.8 | 0.97% | intergenic (+132/+36) | USA300HOU_pUSA300HOUMR0003/USA300HOU_pUSA300HOUMR0004 | hypothetical protein/hypothetical protein |
| ? | NC_012417 | = 1963 | 1112 (1.020) | intergenic (+196/+130) | USA300HOU_RS14895/USA300HOU_RS14900 | hypothetical protein/hypothetical protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 112 total aligned reads displayed.
GCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000731/2194‑2352‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttaagggttc‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAA < NC_012417/1963‑1816 GCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCCTTCG‑‑‑ACAAGTTTGGGGATTG > 1:67585/1‑149GCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTG < 2:161141/149‑1GCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTG < 1:395843/149‑1GCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTG > 1:23795/1‑149GCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTG < 1:196496/149‑1GCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTG > 1:190271/1‑149GCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGACGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTG < 1:295794/149‑1GCTATTGTTTTTTAGGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTG < 1:560435/149‑1 CTATTGTTTTTTCTGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGT < 2:387080/149‑1 CTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGT < 1:154165/149‑1 CTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGT < 1:85353/149‑1 CTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGT < 1:181638/149‑1 CTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGT < 1:120065/149‑1 CTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGT < 2:74561/149‑1 CTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGT < 1:397026/149‑1 CTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGT < 1:339098/149‑1 CTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGT < 1:336649/149‑1 CTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGT > 1:130271/1‑149 CTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AAGGGCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGT < 2:236779/149‑1 TATTGTTTTTTAAGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGTT > 1:409268/1‑149 ATTGTTTTTTATGAGGANANATAAGGAACATCGTATTTATGCCGAAAAANTTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGTTA < 1:601588/149‑1 TTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAATAAGTTTATTGATGTTGAGAAGAACCTTTAAATAAACTTGCAAACG‑AATGTCGGCATTGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGTATTGTTAAGGG > 2:223983/1‑149 TTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACGCCGTGT‑GGCATATCGTGAGCTATTAATCCGACAATTCG‑‑‑ACAAGTTTTGGGGTTGTTAAGGG > 1:283346/1‑149 TTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGTTAAGGG > 2:550521/1‑149 TTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGCAGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGTTAAGGG > 1:259320/1‑149 TTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGTTAAGGGT > 1:10456/1‑149 TTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGTTAAGGGT > 1:508844/1‑149 TTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGTTAAGGGT > 1:497922/1‑149 TTTATGAGGACAAGTAAGGAGCATCGTGTTTGTGCCTAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTTAACTTGCAGACG‑ATTGTCGGCATAGCGTGCGCTATTAAGCCTACGATTCG‑‑‑ACAAGTTTTGGGATTGTTAAGGGTcc < 2:113375/149‑3 acgcATTTATGCCGAGAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATTTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCT > 2:67354/5‑149 TGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGTTAAGGGTTCCGAGGCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTT > 1:43669/1‑149 AGAAGAACCCTTAACTAAACTTTCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCT > 1:174472/1‑149 AAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCGTCTGCAAGTTT‑‑‑‑A‑‑GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTT > 2:439242/1‑149 CTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTA < 1:67354/149‑1 caattcgTGTTAAGGGTTG‑‑‑TTCTCAACATCAATAAATTTTTTCGGCATAACTGCTTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAAC < 1:26192/142‑1 aatttAGGGTTC‑‑‑TTATCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATA < 1:204900/144‑1 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCCAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGAAACAACACCAATcg > 1:163774/1‑147 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAa > 1:242600/1‑148 GTTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAG > 1:29047/1‑149 GTTAAGGGTTC‑‑‑TTCCCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATCTTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAG < 1:5436/149‑1 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGa > 2:267028/1‑148 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGa > 1:314360/1‑148 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGG > 2:517606/1‑149 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGG > 1:580347/1‑149 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGG < 1:95213/149‑1 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAAAAACACCAATAGG > 2:529905/1‑149 TTAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTATTTCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAag > 1:396589/1‑147 TAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < 1:260146/149‑1 TAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA > 1:579327/1‑149 TAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < 1:513162/149‑1 TAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < 1:333373/149‑1 TAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < 1:412464/149‑1 TAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGA < 1:213444/149‑1 TAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACAACAATAGGA > 2:70403/1‑149 TAAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGCCATAAAGTCGTCGTCTATTTTTTATTATCTTCATGATAATCAAATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAATCAACAACACCAATAGGA > 1:143057/1‑149 AAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCCTCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAA > 2:103058/1‑149 AAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATATAAAAACAAAAAGTAAGCAACAACACCAATAGGAA < 2:447989/149‑1 AAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAA < 1:130244/149‑1 AAGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAA < 1:217036/149‑1 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAATTAAGCAACAACCCCAATAGGAAT > 2:267270/1‑149 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAAT > 2:173327/1‑149 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAAT > 1:111302/1‑149 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAATAGGCAAAAACACCAATAGGAAT > 2:111680/1‑149 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAAAAAAAATTAAACAAAAAACCCAATAGAAAT > 1:13295/1‑149 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATAATCTTTATAGAAAAACAAAAAATAAGCAGCTACCCCAATGGGAct > 1:298727/1‑147 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTATATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAATACAAAAAGTAAGCAACAAGACCAACAGTAAT > 1:566153/1‑149 AGGGTTC‑‑‑TTCTCAACATCAATAAATTTTCACGTCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAAT > 2:580743/1‑149 AGGGTTC‑‑‑TTCTCAACATAAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTGTTATTATCTTCATGATAATCATATTATTCTCCACTCTCGTCAAAAGCATAATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAAT < 2:329073/149‑1 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTTTTTTTTTTTTGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACCCCAATAGGAATA > 2:432027/1‑149 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCTTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATA > 2:593526/1‑149 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCCTCTTTATAGAAAAACAAAAAGTAAGCAACAAGACCAATAGGCATA > 1:251787/1‑149 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATA > 2:122991/1‑149 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATA > 2:599361/1‑149 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATA > 1:473243/1‑149 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATA > 1:236574/1‑149 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATA > 2:279036/1‑149 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATA > 2:307294/1‑149 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATA > 1:90435/1‑149 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGAAACAACACCAATAGGAATA > 1:25759/1‑149 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAACCAACAACACCAATAGGAATA > 1:297723/1‑149 GGGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCCTCCTGATAATCATATTTTGCTTCCATCTAGTCAACAGCATCATCTTGAGAGAAAAACAAAAAGTAAGCAACAACACCAATATGAATA > 2:447728/1‑149 GGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCCTCATCTTTATAGAAAGACAAAAAGTAAGCAACAACACCAATAGGAATAA > 1:406399/1‑149 GGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAA < 2:455322/149‑1 GGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAA > 1:255360/1‑149 GGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAA > 2:303200/1‑149 GGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAA < 1:120229/149‑1 GGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAA < 1:588999/149‑1 GGTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATATAGTAACAAGCTCCAGCCTTATAGAAAACCAAAACATAAGCAACAACACACATAGTAATca > 2:33477/1‑147 GGTTC‑‑‑TTCTCAACATAAATAAATTTTCTGGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAA > 1:374385/1‑149 GTTC‑‑‑TTCTCAACGTCAATAAATTTTCTCGGCATAAATGCGTCGTCTATGTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACGCCAATAGGAATAAA > 1:427897/1‑149 GTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAA > 1:351057/1‑149 GTTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAAAAGGAATAAA > 1:154295/1‑149 TTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACCCCAATAGGAATAAAA > 1:133160/1‑149 TTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAA > 2:476856/1‑149 TTC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAA > 1:509803/1‑149 TTC‑‑‑TTCTCAACATCAATAAATCTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAA < 1:67752/149‑1 TC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAA > 1:96940/1‑149 TC‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCACCTCGTCAAAAGAATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAA > 2:79194/1‑149 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAA < 2:49757/149‑1 C‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAA < 1:417844/149‑1 GCTATTGTTTTTTATGAGGATAAATAAGGAACATCGTATTTATGCCGAAAAAATTTATTGATGTTGAGAAGAACCCTTAACTAAACTTGCAGACG‑AATGTCGGCATAGCGTGAGCTATTAAGCCGACCATTCG‑‑‑ACAAGTTTTGGGATTGTTAAGGGTTC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > CP000731/2194‑2352‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gttaagggttc‑‑‑TTCTCAACATCAATAAATTTTCTCGGCATAAATGCGTCGTCTATTTTTTATTATCTTCATGATAATCATATTTTTCTTCCATCTCGTCAAAAGCATCATCTTTATAGAAAAACAAAAAGTAAGCAACAACACCAATAGGAATAAAAAA < NC_012417/1963‑1816 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |