Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000731	655	1009	355	2 [1]	[1] 2	repA	replication protein A

TATTAAAATATGATTATAGAGATTTAGAAATCATAAAGGCTGTTATTCTTAAAGCAAAAAAATCATTTAATTCAAGGCATGAAGATATGCATTACATGTTAGAGGACATTGAGGATGAAATATTAACTTCTTTAAAAAGACTTAAAAAAGCTATACATGATAGGGGAGTTAAAGGCCAAAAGGAAACAATCAAGTCAATGCAAGCTTATTTAATGCAAACAATTCTAACTGAACTTG  >  CP000731/914‑1150                                                                                                 |                                                                                                                                             tattaAAATATGATTATAGAGATTTAGAAATCATAAAGGCTGTTATTCTTAAAGCAAAAAAATCATTTAATTCAAGGCATGAAGATATGCATTACATGTTAGAGGACATTGAGGATGAAATATTAAATTTTTTACAAAGAc                                                                                                  >  1:410658/1‑141 (MQ=255)                                                                                                 tGTTAGAGGACATTGAGGATGAAATATTAACTTCTTTAAAAAGACTTAAAAAAGCTATAGATGATAGGGGAGTTAAAGGCCAAAAGGAAACAATCAAGTCAATGCAAGCTTATTTAATGCAAATAATTCTAAATGAATTTg  >  2:409388/1‑141 (MQ=255)                                                                                                 |                                                                                                                                             TATTAAAATATGATTATAGAGATTTAGAAATCATAAAGGCTGTTATTCTTAAAGCAAAAAAATCATTTAATTCAAGGCATGAAGATATGCATTACATGTTAGAGGACATTGAGGATGAAATATTAACTTCTTTAAAAAGACTTAAAAAAGCTATACATGATAGGGGAGTTAAAGGCCAAAAGGAAACAATCAAGTCAATGCAAGCTTATTTAATGCAAACAATTCTAACTGAACTTG  >  CP000731/914‑1150

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑