Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	CP000731	1754	1969	216	2 [0]	[0] 2	repA/USA300HOU_pUSA300HOUMR0003	replication protein A/hypothetical protein

ATATGATTTGCCTCTAAGTCTTCAAAATGCCTCTTAAAATCCAAAATAAAAGTGTTTAATATTGTAATAAGGATTGCTATTTTTATAAAAGGAGAGATATCATGAAGATTAAAACTTTCGCTACTTTTACTCATCGTCAAT  >  CP000731/1970‑2110 |                                                                                                                                             atatGATTTGCCTCTAAGTCTTCAAAATGCCTCTTAAAATCCAAAATAAAAGTGTTTAATATTGTAATAAGGATTGCTATTTTTATAAAAGGAGAGATATCATGAAGATTAAAACTTTCGCTACTTTTACTCATCGTCAAt  >  1:405663/1‑141 (MQ=255) atatGATTTGCCTCTAAGTCTTCAAAATGCCTCTTAAAATCCAAAATAAAAGTGTTTAATATTGTAATAAGGATTGCTATTTTTATAAAAGGAGAGATATCATGAAGATTAAAACTTTCGCTACTTTTACTCATCGTCAAt  >  2:543775/1‑141 (MQ=255) |                                                                                                                                             ATATGATTTGCCTCTAAGTCTTCAAAATGCCTCTTAAAATCCAAAATAAAAGTGTTTAATATTGTAATAAGGATTGCTATTTTTATAAAAGGAGAGATATCATGAAGATTAAAACTTTCGCTACTTTTACTCATCGTCAAT  >  CP000731/1970‑2110

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑