Predicted mutation
evidence	seq id	position	mutation	freq	annotation	gene	description
RA	USA300TCH1516_ALE	1,002,200	T→G	90.9%	M173R (ATG→AGG)	mecA →	Adapter protein MecA 1

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	USA300TCH1516_ALE	1,002,200	0	T	G	90.9%	192.7 / 5.2	62	M173R (ATG→AGG)	mecA	Adapter protein MecA 1
Reads supporting (aligned to +/- strand):  ref base T (2/4);  new base G (33/23);  total (35/27)
Fisher's exact test for biased strand distribution p-value = 3.90e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.90e-01

AAGGTTCTAAACGTCAAAAGTCTTCAGCACGTAAAAATACAAGAACAATCATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATATGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATTTAAATGACTATGCTAA  >  USA300TCH1516_ALE/1002062‑1002338                                                                                                                                            |                                                                                                                                           aaGGTTCTAAACGTCAAAAGTCTTCAGCACGTAAAAATACAAGAACAATCATTGTGACATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAggg                                                                                                                                          <  1:352112/141‑1 (MQ=255)                aaaaGTCTTCAGGACGTAAAAATACAAGAATAATCATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACttatt                                                                                                                           <  1:503595/141‑1 (MQ=255)                aaaaGTCTTCAGCACGTAAAAATACAAGAACAATCATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATACCAATCCAGTAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACttatt                                                                                                                           >  1:451158/1‑141 (MQ=255)                   cgacTTCAGCACGTAAAAATACAAGAACAATCATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACttattatt                                                                                                                        >  2:374900/4‑141 (MQ=255)                   aGTCTTCAGCACGTAAAAATACAAGAACAATCATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACttattatt                                                                                                                        >  1:386552/1‑141 (MQ=255)                   aGTCTTCAGCACGTAAAAATACAAGAACAATCATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACttattatt                                                                                                                        >  1:398803/1‑141 (MQ=255)                   aGTCTTCAGCACGTAAAAATACAAGAACAATCATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTGATATAGGGTTGATGGTACttattatt                                                                                                                        >  1:386356/1‑141 (MQ=255)                          aacACGTAAAGAGACAAGAACAATGATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTTTTATATAGGGTTGATGGTACTTATTATTATGCTGt                                                                                                                 <  1:158824/139‑1 (MQ=255)                           gCACGTAAAAATACAAGAACAATCATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGta                                                                                                                >  1:532813/1‑141 (MQ=255)                              cGTAAAAATACAAGAACAAACATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTACGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATAGAGGGTTGATGGTACTTATTATTATGCTGTatat                                                                                                             >  2:341518/1‑141 (MQ=255)                                 aaaaaTACAAGAACACTCCTTGTGCAAGTTAACGTTTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATATGGTTGATGGTACCTATTATTATGCTGTATAtttt                                                                                                          <  1:317071/141‑1 (MQ=255)                                 aaaaaTACAAGAACAATCATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAGTTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATAgttt                                                                                                          <  1:439492/141‑1 (MQ=255)                                     aTACAAGAACAATCATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATa                                                                                                      >  2:229186/1‑141 (MQ=255)                                     aTACAAGAACAATCATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATa                                                                                                      >  2:532888/1‑141 (MQ=255)                                           aaaCAATCAGAGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATg                                                                                                <  2:198255/140‑1 (MQ=255)                                            aaCAATCATTGTGAAATTTAACGTTTTAGA‑AGTTGTTATTAATTATGCCTATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGt                                                                                               <  1:264/141‑1 (MQ=255)                                            aaCAATCATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTGTTATTATGCTGTATATTTTGATAGTCATGt                                                                                               >  1:149686/1‑141 (MQ=255)                                            aaCAATCATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGTTGTATATTTTGATAGTCATGt                                                                                               >  1:149719/1‑141 (MQ=255)                                                aTCATTGTGAAATTTAACGATTTCGA‑AGAGGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGAt                                                                                           <  2:552916/141‑1 (MQ=255)                                                  cATTGTGAAATTTAACGATTTAGACAGCTATT‑TGAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCa                                                                                         >  1:296528/1‑141 (MQ=255)                                                  cATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAAGCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCa                                                                                         >  1:394796/1‑141 (MQ=255)                                                   aTTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCaa                                                                                        <  1:122410/141‑1 (MQ=255)                                                   aTTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCaa                                                                                        <  1:122639/141‑1 (MQ=255)                                                    ttGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTAATCaag                                                                                       >  2:372197/1‑141 (MQ=255)                                                         aaaTTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTc                                                                                  <  2:532813/141‑1 (MQ=255)                                                          aaTTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCa                                                                                 <  1:269769/141‑1 (MQ=255)                                                            tttAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCAtt                                                                               <  2:537609/141‑1 (MQ=255)                                                                aCGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATg                                                                           >  1:220730/1‑141 (MQ=255)                                                                     ttAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGt                                                                      >  1:431670/1‑141 (MQ=255)                                                                         a‑agaTGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACa                                                                  <  1:349909/141‑1 (MQ=255)                                                                             aTGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATATGGTTGATGGTACTTATTATTATGCTGTATAGTTTGATAGTCATGTTTATCAAGAAGTCATTAATGATAGTTACAGTc                                                               <  1:294304/141‑1 (MQ=255)                                                                             aTGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGGTGGTTAGAGTc                                                               >  1:154441/1‑141 (MQ=255)                                                                                ttattaATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATATGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAAt                                                            <  1:235971/141‑1 (MQ=255)                                                                                    taattaTGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCt                                                        >  1:279474/1‑141 (MQ=255)                                                                                       ttaTGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGa                                                     >  1:193753/1‑141 (MQ=255)                                                                                         aatcATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACGGTCAATTGCTTGAAt                                                   <  1:308071/138‑1 (MQ=255)                                                                                                 cATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTAt                                           <  1:514652/141‑1 (MQ=255)                                                                                                 cATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGAGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTAt                                           >  1:335539/1‑141 (MQ=255)                                                                                                  aTAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATc                                          <  2:225794/141‑1 (MQ=255)                                                                                                     gCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCaa                                       <  1:479596/141‑1 (MQ=255)                                                                                                        aTCCAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGATTGAATTTGCTTATCAAacag                                    >  2:266643/1‑141 (MQ=255)                                                                                                           cAATAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAacagaca                                 <  1:68276/141‑1 (MQ=255)                                                                                                              tAACTACAGAGTTTGAAGATTTGTTATATATGGTTGATGGTACTTATTATTATGCTGGATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGacagaa                              <  2:19438/141‑1 (MQ=255)                                                                                                              tAACTACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGacagaa                              >  1:546449/1‑141 (MQ=255)                                                                                                                  tACAGAGTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGaaagaacaga                          >  2:224674/1‑141 (MQ=255)                                                                                                                     agagTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGt                       <  1:229186/141‑1 (MQ=255)                                                                                                                     agagTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGt                       <  1:532888/141‑1 (MQ=255)                                                                                                                      gagTTTGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGtt                      <  1:59459/141‑1 (MQ=255)                                                                                                                        gTTTGAAGATTTGTTAGATATGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGttta                    >  2:325143/1‑141 (MQ=255)                                                                                                                         tttGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGtctat                   <  1:439904/141‑1 (MQ=255)                                                                                                                         tttGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGAGAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGtttat                   <  2:487328/141‑1 (MQ=255)                                                                                                                          ttGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGtttatt                  >  2:192073/1‑141 (MQ=255)                                                                                                                           tGAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGtttattt                 >  1:280034/1‑141 (MQ=255)                                                                                                                            gAAGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGtttattta                >  1:496481/1‑141 (MQ=255)                                                                                                                             aaGATTTGTTATATATGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATTTaa               >  2:71857/1‑141 (MQ=255)                                                                                                                             aaGATTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATTTaa               >  1:373589/1‑141 (MQ=255)                                                                                                                             aaGATTTGTTATATAGGGTTGATGGTACGTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATTTaa               >  2:357499/1‑141 (MQ=255)                                                                                                                                aTTTGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCGTGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTCTTTaaacg            <  2:451158/141‑3 (MQ=255)                                                                                                                                  ttGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATTTAAATGAc          >  1:524434/1‑141 (MQ=255)                                                                                                                                  ttGTTATATAGGGTTGATGGTACTTATTATTATGCTCTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACATAACAGAAGTTTATTTAAATGAc          >  1:423249/1‑141 (MQ=255)                                                                                                                                   tGTTATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATTTAAATGACt         >  2:389732/1‑141 (MQ=255)                                                                                                                                     ttATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATTTAAATgtgtat       >  2:349874/1‑136 (MQ=255)                                                                                                                                     ttATATAGGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATTTAAATGACTAt       >  2:186289/1‑141 (MQ=255)                                                                                                                                        tatagGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATTTAAATGACTATGCt    <  1:303864/141‑1 (MQ=255)                                                                                                                                          tatGGTTGATGGTACTTATGATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATTTAAATGACTATGCTaa  <  1:9227/141‑1 (MQ=255)                                                                                                                                            |                                                                                                                                           AAGGTTCTAAACGTCAAAAGTCTTCAGCACGTAAAAATACAAGAACAATCATTGTGAAATTTAACGATTTAGA‑AGATGTTATTAATTATGCATATCATAGCAATCCAATAACTACAGAGTTTGAAGATTTGTTATATATGGTTGATGGTACTTATTATTATGCTGTATATTTTGATAGTCATGTTGATCAAGAAGTCATTAATGATAGTTACAGTCAATTGCTTGAATTTGCTTATCCAACAGACAGAACAGAAGTTTATTTAAATGACTATGCTAA  >  USA300TCH1516_ALE/1002062‑1002338

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑