| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | USA300TCH1516_ALE | 82395 = | 204 (2.080) | 10 (0.100) | 5/290 | 2.2 | 4.9% | coding (500/957 nt) | nikB_1 | Nickel transport system permease protein NikB |
| ? | USA300TCH1516_ALE | 82432 = | 193 (2.020) | coding (537/957 nt) | nikB_1 | Nickel transport system permease protein NikB | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 230 total aligned reads displayed.
TAATGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATCATCGTACAAATTAAAGAGATATTTGCACCA > USA300TCH1516_ALE/82282‑82582 | tAATGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTcaca < 1:497457/151‑1 (MQ=255) aTGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAAt > 1:386816/1‑151 (MQ=255) tGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAAtt > 1:209250/1‑151 (MQ=255) aaTTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAAttgtt > 3:310321/1‑151 (MQ=255) aTTCGTGGATTCGCCCATGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTTGGCTTACGTTGGTAATTGTTACCATTTGTAGGTTGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAAttgttg < 4:124611/151‑1 (MQ=255) ttCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATtgttgt < 1:1039530/151‑1 (MQ=255) gaaaaatgtcttaactgcgccagttgatacgcatcttgatctaacgtttgtgtaatcagatgtgctgtcatcaataagatatgacacccttctataacaacaattGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATtgttgt > 2:984756‑M1/106‑151 (MQ=255) cGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTta < 2:1022310/151‑1 (MQ=255) cGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTta < 3:211424/151‑1 (MQ=255) aatgtcttaactgcgccagttgatacgcatcttgatctaacgtttgtgtaatcagatgtgctgtcatcaataagatatgacacccttctataacaacaattGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTtata > 2:896068‑M1/102‑151 (MQ=255) aatgtcttaactgcgccagttgatacgcatcttgatctaacgtttgtgtaatcagatgtgctgtcatcaataagatatgacacccttctataacaacaattGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTtata > 1:892126‑M1/102‑151 (MQ=255) ttCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTGCCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAg < 2:689717/151‑1 (MQ=255) ngCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAggg > 2:961522/2‑151 (MQ=255) cGCCCAAGTGATGACCTCAATGCCAGTATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAcgg < 4:349392/151‑1 (MQ=255) cGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAggg < 1:687231/151‑1 (MQ=255) cGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAggg > 1:99984/1‑151 (MQ=255) gCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGgt > 2:897031/1‑151 (MQ=255) cccAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTAGCAGTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGgtg > 1:634804/1‑151 (MQ=255) cccAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGgtg < 2:522311/151‑1 (MQ=255) ccAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTTCCAATCTTCACAATTGTTGTTATAGAAGGgtgt > 2:388128/1‑151 (MQ=255) aaGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCa < 1:129668/151‑1 (MQ=255) gatgaCCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATc < 2:939309/151‑1 (MQ=255) atgaCCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCt < 2:189903/151‑1 (MQ=255) tgaCCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCCTTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACTATTGTTGTTATAGAAGGGTGTCATATCtt > 2:432155/1‑151 (MQ=255) ccTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTCGTTATAGAAGGGTGTCATATCTTAtt > 2:343341/1‑151 (MQ=255) cAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATtgat > 1:848899/1‑151 (MQ=255) aaTGCGAGAATACTGGTTAGCTATTTTGTTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTTTAGAAGGGTGTCATATCTTATtgatn < 4:196644/151‑2 (MQ=255) gCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACa < 3:340232/151‑1 (MQ=255) gCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCACTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACa < 4:437885/151‑1 (MQ=255) ccAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAg < 3:253843/151‑1 (MQ=255) ccAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAg < 2:666278/151‑1 (MQ=255) aCTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCt < 1:1025556/151‑1 (MQ=255) ggTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGTCAATGGGTACCATTTTTAGTGAGGGATTCATGGCAATACTTTGTGCTGCCAATCTTCACAATTGTGTTTATAGAATAGTGGCAGATCTGATTTATGACTGCACAGCTGag > 2:265777/1‑150 (MQ=255) tAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTac < 3:88965/151‑1 (MQ=255) tAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTac > 4:448597/1‑151 (MQ=255) aGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTaca < 4:181970/151‑1 (MQ=255) gCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTacac < 1:486882/151‑1 (MQ=255) cTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTAcaca > 1:309692/1‑151 (MQ=255) tATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACaa > 2:275264/1‑151 (MQ=255) aTTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACaaa < 1:116845/151‑1 (MQ=255) tttATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACg < 3:97940/151‑1 (MQ=255) ttcatttaTTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACg < 1:36215/144‑1 (MQ=255) cATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGAt > 1:658500/1‑151 (MQ=255) cATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGAt > 2:740303/1‑151 (MQ=255) cATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGAt > 1:103322/1‑151 (MQ=255) tttATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGAAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCa > 1:953823/1‑151 (MQ=255) ttattaTTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCaa > 3:278730/1‑151 (MQ=255) ttattaTTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCaa > 1:597392/1‑151 (MQ=255) tattatTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAg > 1:732274/1‑151 (MQ=255) tattTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATg > 1:5232/1‑151 (MQ=255) tAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTa < 4:354499/151‑1 (MQ=255) ggCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATc > 2:789730/1‑151 (MQ=255) cGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCaa > 1:728568/1‑151 (MQ=255) ttGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGgcg < 2:988265/151‑1 (MQ=255) cAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGACGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGt > 4:246118/1‑151 (MQ=255) aaTTGGTACGATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGtt < 4:361034/151‑1 (MQ=255) ttGTCACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTAATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTCGCGCAGTTaa < 1:1006461/151‑1 (MQ=255) tGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAg < 2:709453/151‑1 (MQ=255) ttACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGAc < 2:549894/151‑1 (MQ=255) aCCATGTGTAGGTAGTGATTCATGGCATCACTTTGTGCTTCCCATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTAGCAACTGGCGCAGTTAAGACAt > 4:270726/1‑151 (MQ=255) ccATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACAtt > 1:930994/1‑151 (MQ=255) ccATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAAGCGTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACAtt > 3:449561/1‑151 (MQ=255) ataacaacaattgtgaagattggcagcacaaagtgttgccatgaatcacAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACAttt > 4:61256‑M2/50‑151 (MQ=255) acaacaattgtgaagattggcagcacaaagtgttgccatgaatcacAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTc > 2:868084‑M2/47‑151 (MQ=255) acaacaattgtgaagattggcagcacaaagtgttgccatgaatcacAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTc > 2:359881‑M2/47‑151 (MQ=255) gtaggtagTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGt < 4:4077/151‑1 (MQ=255) taggtagTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGtt < 1:793469/151‑1 (MQ=255) aggtagTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTa > 3:158897/1‑151 (MQ=255) ggtagTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTaa > 3:118578/1‑151 (MQ=255) gtagTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACGATTGTTGTGATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTaaa > 2:837270/1‑151 (MQ=255) gtagTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTaaa > 4:57239/1‑151 (MQ=255) tagTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTaaaa < 2:625501/151‑1 (MQ=255) tagTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTaaaa < 2:915489/151‑1 (MQ=255) GTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAgc < 2:465417‑M1/151‑1 (MQ=255) GTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAgc < 1:35037‑M1/151‑1 (MQ=255) TGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAgcg > 2:16970‑M1/1‑151 (MQ=255) TGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAgcg < 4:408860‑M1/151‑1 (MQ=255) ATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGcgcg > 2:23761‑M1/1‑151 (MQ=255) ATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGcgcg < 3:180444‑M1/151‑1 (MQ=255) tCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTa < 2:366108/151‑1 (MQ=255) cATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTat > 2:1033664/1‑151 (MQ=255) cATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGACGCAGGTAAGACATTTTTCGGTAAAAGGGCGGat > 4:290944/1‑151 (MQ=255) attggcagcacaaagtgttgccaatattcacAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTat > 1:269076‑M2/32‑151 (MQ=255) aTGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTatc > 2:54248/1‑151 (MQ=255) tGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTatca > 3:53201/1‑151 (MQ=255) tGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTatca > 3:139725/1‑151 (MQ=255) cAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTCTCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATCATCg < 1:768741/151‑1 (MQ=255) ttGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATCATCGTACAAAt < 1:58085/151‑1 (MQ=255) gctgcCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATCATCGTACAAATTaaa < 1:254611/151‑1 (MQ=255) gcCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATCATCGTACAAATTAAagag > 2:290999/1‑151 (MQ=255) ccACTCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTCAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATCATCGTACAAATTAAAgaga < 2:356912/151‑1 (MQ=255) cTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATCATCGTACAAATTAAAGAGATAttt > 2:113863/1‑151 (MQ=255) cTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATCATCGTACAAATTAAAGAGATAttt > 4:31026/1‑151 (MQ=255) ttCACAATTGTTGTTATAGAAAGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATCATCGTACAAATTAAAGAGATATTTg < 2:935101/151‑1 (MQ=255) tcacAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATCATCGTACAAATTAAAGAGATATTTGc < 2:401695‑M2/147‑1 (MQ=255) cacAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATCATCGTACAAATTAAAGAGATATTTGCa > 2:94851‑M2/4‑151 (MQ=255) cacAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATCATCGTACAAATTAAAGAGATATTTGCa > 2:606078‑M2/4‑151 (MQ=255) cAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATCATCGTACAAATTAAAGAGATATTTGCAcc < 2:831895‑M2/150‑1 (MQ=255) cAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATCATCGTACAAATTAAAGAGATATTTGCAcc < 1:243584‑M2/150‑1 (MQ=255) cAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATCATCGTACAAATTAAAGAGATATTTGCAcc < 3:404430‑M2/150‑1 (MQ=255) | TAATGGAATTCGTGGATTCGCCCAAGTGATGACCTCAATGCCAGAATACTGGTTAGCTATTTTATTCATTTATTATTTAGGCGTACGTTGGCAATTGTTACCATTTGTAGGTAGTGATTCATGGCAACACTTTGTGCTGCCAATCTTCACAATTGTTGTTATAGAAGGGTGTCATATCTTATTGATGACAGCACATCTGATTACACAAACGTTAGATCAAGATGCGTATCAACTGGCGCAGTTAAGACATTTTTCGTTAAAAGCGCGTATCATCGTACAAATTAAAGAGATATTTGCACCA > USA300TCH1516_ALE/82282‑82582 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |