Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	USA300TCH1516_ALE	2055594	2055697	104	4 [1]	[1] 2	purB/sspP	Adenylosuccinate lyase/Staphopain A

AAAAATACGCAGAGATTTTTTTAATAGTAAATTTTTATAGAAAGACATAAATTGACTACGCTTCTTTCAAAATCGACTAATATATTTTCATGAAACTTTCGATCATATTAATTATTGAATGAGATGTTTGCAATTTAGTAAATAAGCTACTAAATTATTACATAAAC  >  USA300TCH1516_ALE/2055443‑2055609                                                                                                                                                       |                 aaaaaTACGCAGAGATTTTTTTAATAGTAAATTTTTATAGAAAGACATAAATTGACTACGCTTCTTTCAAAATCGACTAATATATTTTCATGAAACTTTCGATCATATTAATTATTGAATGAGATGTTTGCAATTTAGTAAATAAGctact                  <  1:978183/151‑1 (MQ=255)                 ttttttAATAGTAAATTTTTATAGAAAGACATAAATTGACTACGCTTCTTTCAAAATCGACTAATATATTTTCATGAAACTTTCGATCATATTAATTATTGAATGAGATGTTTGCAATTTAGTAAATAAGCTACTAAATTATTACATAAAc  <  1:82462/151‑1 (MQ=255)                                                      gACTACGCTTCTTTCAAAATCGACTAATATATTTTCATGAAACTTTCGATCATATTAATTATTGAATGAGATGTTTGCAATTTAGTAAATAAGctact                  >  1:171814/1‑98 (MQ=255)                                                      gACTACGCTTCTTTCAAAATCGACTAATATATTTTCATGAAACTTTCGATCATATTAATTATTGAATGAGATGTTTGCAATTTAGTAAATAAGctact                  <  2:171814/98‑1 (MQ=255)                                                                                                                                                       |                 AAAAATACGCAGAGATTTTTTTAATAGTAAATTTTTATAGAAAGACATAAATTGACTACGCTTCTTTCAAAATCGACTAATATATTTTCATGAAACTTTCGATCATATTAATTATTGAATGAGATGTTTGCAATTTAGTAAATAAGCTACTAAATTATTACATAAAC  >  USA300TCH1516_ALE/2055443‑2055609

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑