Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913_3_bme_pgi 257,908 Δ776 bp [crl] [crl]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913_3_bme_pgi 257908–258676 258683 8–776 217 [0] [0] 222 [crl] [crl]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi = 2579070 (0.000)197 (1.080) 98/180 0.1 100% intergenic (+8/‑769) crl/crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers
?NC_000913_3_bme_pgi 258684 = 0 (0.000)pseudogene (9/331 nt) crl pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers

Only 100 of 217 total aligned reads displayed.

CATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTT  >  NC_000913_3_bme_pgi/257809‑258003
                                                                                                  |                                                                                                
cATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTA                                                                                                  <  1:3647079‑M1/99‑1 (MQ=255)
 aTCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAan                                                                                                <  2:256723‑M1/100‑3 (MQ=255)
  tCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAag                                                                                                >  2:3693792‑M1/1‑97 (MQ=255)
     caacaGGAGATAGCAATGACATTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgca                                                                                            <  2:2788545‑M1/100‑7 (MQ=255)
      aacaGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgca                                                                                            >  1:447004‑M1/1‑93 (MQ=255)
       acaGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgca                                                                                            >  1:4152959‑M1/1‑92 (MQ=255)
          ggAGATAGCAATGACGTTACCGCGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaaga                                                                                        >  1:1522165‑M1/1‑89 (MQ=255)
           gagaTAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagat                                                                                       >  1:520941‑M1/1‑88 (MQ=255)
             gaTAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataat                                                                                    >  1:4880‑M1/1‑86 (MQ=255)
             gaTAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataat                                                                                    >  1:2262577‑M1/1‑86 (MQ=255)
                 gCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgat                                                                                >  2:4481004‑M1/1‑82 (MQ=255)
                 gCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgat                                                                                >  2:3964605‑M1/1‑82 (MQ=255)
                  cAATGACGTTACCGGGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTACATTCGTGAAGGTAagtgcaaagataatcgatt                                                                               >  2:27659‑M1/1‑81 (MQ=255)
                  cAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgatt                                                                               >  2:4200844‑M1/1‑81 (MQ=255)
                    aTGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattc                                                                              <  2:3325338‑M1/99‑21 (MQ=255)
                     tGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctt                                                                            <  1:2590041‑M1/100‑23 (MQ=255)
                           tACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttc                                                                        >  2:3417213‑M1/1‑72 (MQ=255)
                            aCCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgat                                                                     >  2:1435306‑M1/1‑71 (MQ=255)
                            aCCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgat                                                                     >  2:2680807‑M1/1‑71 (MQ=255)
                            aCCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcga                                                                      <  1:1477930‑M1/99‑29 (MQ=255)
                             ccGAGTGGACAGCCGAAGAGCAGATTGATCAAAAAATTTACCGCTCTAGGCCCGTATATTCGTGACAGTAagtgcaaagataatcgattctttttcgatt                                                                    >  2:4070181‑M1/1‑70 (MQ=255)
                             ccGAGTGGACACCCGAAGAGCAGATTGATCACAAAATTCACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgcttc                                                                              >  2:1903847‑M1/1‑70 (MQ=255)
                             ccGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgatt                                                                    <  1:3342255‑M1/100‑31 (MQ=255)
                             ccGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgat                                                                     <  2:1773152‑M1/99‑30 (MQ=255)
                              cGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattg                                                                   >  1:3334188‑M1/1‑69 (MQ=255)
                                  tGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctg                                                               <  2:3779401‑M1/100‑36 (MQ=255)
                                  tGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctg                                                               <  1:3529854‑M1/100‑36 (MQ=255)
                                   ggACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGAATATTCGTGAAGGTAagtgcaaagataatcgaatctttttcgattgtctg                                                               >  2:2831674‑M1/1‑64 (MQ=255)
                                   gcacacccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATCTTCGTGAAGGTAagtccaacgataatcgattctatttcgattgtc                                                                 >  2:490395‑M1/3‑64 (MQ=255)
                                    gACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggc                                                             <  1:2748490‑M1/100‑38 (MQ=255)
                                    gACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctgg                                                              <  1:2058330‑M1/99‑37 (MQ=255)
                                      cacCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctg                                                           <  1:2866024‑M1/100‑40 (MQ=255)
                                      atcccgaAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctg                                                           <  1:1312971‑M1/98‑40 (MQ=255)
                                        cccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgta                                                         >  2:2628926‑M1/1‑59 (MQ=255)
                                        cccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgta                                                         >  1:2111471‑M1/1‑59 (MQ=255)
                                         ccGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgta                                                         >  1:3433481‑M1/1‑58 (MQ=255)
                                          cGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatg                                                       >  2:2157777‑M1/1‑57 (MQ=255)
                                          cGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatg                                                       <  2:81598‑M1/100‑44 (MQ=255)
                                           gAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgc                                                      <  1:2824390‑M1/100‑45 (MQ=255)
                                            aaGAGCAGATTGATCAAAAAATTTACTGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcg                                                     <  1:2628444‑M1/100‑46 (MQ=255)
                                            aaGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcg                                                     <  2:2291310‑M1/100‑46 (MQ=255)
                                              gagCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATTTTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtc                                                   <  1:2032406‑M1/100‑48 (MQ=255)
                                                gCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaa                                                 >  2:381389‑M1/1‑51 (MQ=255)
                                                  aGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacg                                               <  2:3505797‑M1/100‑52 (MQ=255)
                                                  aGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacg                                               <  2:3790743‑M1/100‑52 (MQ=255)
                                                  aGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacg                                               <  1:1642271‑M1/100‑52 (MQ=255)
                                                  aGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaac                                                <  2:206708‑M1/99‑51 (MQ=255)
                                                   gATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgt                                              >  2:4554470‑M1/1‑48 (MQ=255)
                                                    aTTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtg                                             <  1:848091‑M1/100‑54 (MQ=255)
                                                       gATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaa                                          >  1:2534442‑M1/1‑44 (MQ=255)
                                                       gATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaa                                          >  1:2137001‑M1/1‑44 (MQ=255)
                                                        aTCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaac                                         >  2:1525445‑M1/1‑43 (MQ=255)
                                                        aTCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaa                                          <  2:4279403‑M1/99‑57 (MQ=255)
                                                         tCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaac                                         >  1:1849481‑M1/1‑42 (MQ=255)
                                                          cAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccg                                       >  1:1087646‑M1/1‑41 (MQ=255)
                                                          cAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccg                                       >  2:660465‑M1/1‑41 (MQ=255)
                                                          cAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccg                                       >  1:310391‑M1/1‑41 (MQ=255)
                                                          cAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccg                                       >  1:3727869‑M1/1‑41 (MQ=255)
                                                          cAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccg                                       >  1:3885970‑M1/1‑41 (MQ=255)
                                                           aaaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccgg                                      >  1:3246259‑M1/1‑40 (MQ=255)
                                                           aaaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccg                                       >  1:822907‑M1/1‑40 (MQ=255)
                                                           aaaaaaTATACCGCACTAGGCCCGTAAATTCGAGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccgg                                      >  2:4812492‑M1/1‑40 (MQ=255)
                                                            aaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccgg                                      >  1:1297925‑M1/1‑39 (MQ=255)
                                                            aaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaac                                         >  2:1689824‑M1/1‑39 (MQ=255)
                                                            aaaaaTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattcgttttcgattgtctggctgtatgcgtcaacgtgaaaccggc                                     <  2:3578242‑M1/100‑62 (MQ=255)
                                                                aTTTACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccg                                 <  2:4005750‑M1/100‑66 (MQ=255)
                                                                 tttACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgtgtcaacgtgaaaccggcaccg                                 >  2:576349‑M1/1‑34 (MQ=255)
                                                                   tACCGGACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgagtgtctggctgtatgcgtcaacgtgaaaccggcaccgga                               <  2:4634349‑M1/99‑68 (MQ=255)
                                                                   tACCGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccgga                               <  1:959966‑M1/99‑68 (MQ=255)
                                                                     ccGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgtttttctggctgtatgcgtcaacgtgaaaccggcaccggaag                             >  2:3638555‑M1/1‑30 (MQ=255)
                                                                     ccGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagt                            >  1:1245624‑M1/1‑30 (MQ=255)
                                                                     ccGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagt                            >  2:3164815‑M1/1‑30 (MQ=255)
                                                                      cGCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtg                           <  1:3420083‑M1/100‑72 (MQ=255)
                                                                       gCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgc                          >  1:247520‑M1/1‑28 (MQ=255)
                                                                       gCACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatagattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgc                          >  2:2143466‑M1/1‑28 (MQ=255)
                                                                        cACTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcg                         <  2:4650184‑M1/100‑74 (MQ=255)
                                                                          cTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtg                       <  1:745135‑M1/100‑76 (MQ=255)
                                                                          cTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtg                       <  2:121241‑M1/100‑76 (MQ=255)
                                                                          cTAGGCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtg                       <  1:924771‑M1/100‑76 (MQ=255)
                                                                             ggCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaat                    >  1:2367872‑M1/1‑22 (MQ=255)
                                                                             ggCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaa                     <  2:219365‑M1/99‑78 (MQ=255)
                                                                              gCCCGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaacaggcaccggaagtgcgggaat                    <  2:4044168‑M1/99‑79 (MQ=255)
                                                                               cccGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattc                  >  1:1007644‑M1/1‑20 (MQ=255)
                                                                               cccGTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattc                  >  1:474130‑M1/1‑20 (MQ=255)
                                                                                  gTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctgg               <  1:4485789‑M1/100‑84 (MQ=255)
                                                                                  gTATATTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctgg               <  2:4089461‑M1/100‑84 (MQ=255)
                                                                                     tatTCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctgggg             >  2:1971320‑M1/1‑14 (MQ=255)
                                                                                       ttCGTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctg          >  1:2919982‑M1/1‑12 (MQ=255)
                                                                                         cGTGGAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaagcggcaccggaagtgcgtgaattctggggctgn         <  2:3712388‑M1/99‑90 (MQ=255)
                                                                                          gTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggt        <  1:980362‑M1/99‑91 (MQ=255)
                                                                                          gTGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggt        <  1:3193016‑M1/99‑91 (MQ=255)
                                                                                           tGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtgn      <  2:838195‑M1/100‑93 (MQ=255)
                                                                                           tGAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtgg      <  1:3022657‑M1/100‑93 (MQ=255)
                                                                                            gAAGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtgga     >  2:1160‑M1/1‑7 (MQ=255)
                                                                                             aaGGTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggat    <  1:4296397‑M1/100‑95 (MQ=255)
                                                                                               ggTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatgg  <  2:1586407‑M1/100‑97 (MQ=255)
                                                                                               ggTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatgg  <  1:162315‑M1/100‑97 (MQ=255)
                                                                                               ggTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatg   >  1:602060‑M1/1‑4 (MQ=255)
                                                                                               ggTAagtgcaaagataatcgattctttttcgattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattctggggctggtggatg   >  2:932760‑M1/1‑4 (MQ=255)
                                                                                                 tAagtgcaaagataatcgattctttttagattgtctggctgtatgcgtcaacgtgaaaccggcaccggaagtgcgtgaattatggggctggtggatg   >  1:4704220‑M1/1‑2 (MQ=255)
                                                                                                  |                                                                                                
CATCACAACAGGAGATAGCAATGACGTTACCGAGTGGACACCCGAAGAGCAGATTGATCAAAAAATTTACCGCACTAGGCCCGTATATTCGTGAAGGTAGGTAATGACTCCAACTTATTGATAGTGTTTTATGTTCAGATAATGCCCGATGACTTTGTCATGCAGCTCCACCGATTTTGAGAACGACAGCGACTT  >  NC_000913_3_bme_pgi/257809‑258003

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: