| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_bme_pgi | = 2113347 | 193 (1.010) | 35 (0.200) | 18/180 | 15.6 | 16.7% | intergenic (‑286/+87) | rfbB/wcaN | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding/putative regulatory subunit for GalU |
| ? | NC_000913_3_bme_pgi | = 2113385 | 171 (0.970) | intergenic (‑324/+49) | rfbB/wcaN | dTDP‑glucose 4,6 dehydratase, NAD(P)‑binding/putative regulatory subunit for GalU | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_bme_pgi/2113243‑2113347‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacggcagTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTTTATTCAA < NC_000913_3_bme_pgi/2113385‑2113287 GTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAAC > 1:4391722/1‑100 TCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACG > 2:1094857/1‑100 TCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACG > 2:1095947/1‑100 TCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACG > 1:3381291/1‑100 CTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGG > 2:4348154/1‑100 CTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGG > 2:4348106/1‑100 TTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGG > 2:3100330/1‑99 TACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGG > 2:371913/1‑98 TACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGG > 1:2640176/1‑98 ACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGC < 2:3243309/98‑1 CCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG > 2:3341370/1‑99 CCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG > 1:2584696/1‑99 CCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG < 2:4538975/99‑1 CCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG > 1:840459/1‑99 CCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAAC < 2:4204916/94‑1 CCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAA > 1:3206389/1‑100 CCGCTCTGGAAACAAGGAAAAGCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTCGTTATTCTTATGGTATATATAAAACAAC > 2:2587847/1‑89 CTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAGCAAAAGTAATTTGTTGC < 2:941234/100‑1 GAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGAGAAAATTCGCAGCAAAAGTAATTTGTTGCG < 2:2515261/99‑1 GAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAGCAAAAGTAATTTGTTGCG < 1:3465588/98‑1 AAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAGCAAAAGTAATTTGTTGCGAAT < 1:129817/100‑1 AAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAGCAAAAGTAATTTGTTGCGAATC < 2:3371466/100‑1 AAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAGCAAAAGTAATTTGTTGCGAATC < 1:1265408/100‑1 AAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAGCAAAAGTAATTTGTTGCGAATC < 2:599215/100‑1 AAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAGCAAAAGTAATTTGTTGCGAATC < 1:677446/100‑1 AACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATC < 1:1096748/100‑1 AACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATC < 1:1097839/100‑1 CTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTT < 1:1659792/100‑1 CTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTAGAAGCAAAAGTAATTTGTTGCGAATCTTC < 2:586792/100‑1 TGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCC < 1:4135524/98‑1 GAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGGTTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTG < 2:2147575/99‑1 GAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTG < 1:3277708/99‑1 AATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGC < 1:477132/100‑1 AATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGC < 1:782144/100‑1 AATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGC < 1:2534572/100‑1 AATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGC < 1:3354552/100‑1 AATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTG < 2:3398582/99‑1 AATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑GAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCC < 1:1524080/100‑1 ATAAAACCCTACTGCTAACTCGTTCTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCC < 2:4396779/100‑1 AAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTT < 1:565362/100‑1 AAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTT < 2:2290389/100‑1 ACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGT < 2:2196088/100‑1 ACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGT < 2:2196524/100‑1 ACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGT < 2:2195891/100‑1 ACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGT < 2:1075417/100‑1 CCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTT < 1:1197910/100‑1 CCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTT < 1:3641298/100‑1 CCTACTGCTAACTCGTGGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGT < 2:222750/98‑1 CTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTTAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTAT < 2:3199190/99‑1 CTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTA < 2:2149435/98‑1 TTCTGATGGTTTATATAAAACAACGGCAG‑GAAGATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAAC < 1:4674915/99‑1 ACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTn < 1:2094804/99‑2 ACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTTT < 1:1007062/100‑1 ACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTTT < 1:812278/100‑1 ACGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTT < 2:1293389/99‑1 CGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTTTA < 1:1451611/100‑1 CGGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAG < 2:1238219/90‑1 GGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTTTAT > 1:3682216/1‑100 GGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTTTAT < 1:134821/100‑1 GGCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTTTA < 2:3703695/99‑1 gaAGTGAAAATTCGCAGAAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTTTATT < 2:1542192/98‑1 GCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTTTATT < 2:3330193/100‑1 GCAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTTTATT < 2:3229761/100‑1 CAGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTTTA < 2:453355/97‑1 AGTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTTTATTC > 1:3312810/1‑99 GTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTTTATTCAA < 1:2071487/100‑1 GTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTTTATTCA > 1:839895/1‑99 GTCTTACCAATCCGCTCTGGAAACAAGGAAAATCCTGGAAAACTTTGAATAAAACCCTACTGCTAACTCGTTGTTATTCTGATGGTTTATATAAAACAACGGCAG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_bme_pgi/2113243‑2113347‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacggcagTGAAAATTCGCAGCAAAAGTAATTTGTTGCGAATCTTCCTGCCGTTGTTTTATATAAACCATCAGAATAACAACGAGTTAGCAGTAGGGTTTTATTCAA < NC_000913_3_bme_pgi/2113385‑2113287 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |