New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi = 225998NA (NA)36 (0.200) 16/188 17.4 NA noncoding (240/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913_3_bme_pgi = 226015 NA (NA)noncoding (257/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 164 total aligned reads displayed.

ATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACAT  >  NC_000913_3_bme_pgi/225923‑226113
                                                                                            |                                                                                                  
 tAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGggagga                                                                                            <  1:1580651/100‑1 (MQ=32)
    gTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGcc                                                                                         >  1:1595340/1‑100 (MQ=34)
      tAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGcc                                                                                         >  1:167890/1‑98 (MQ=34)
        aTGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGCCGCGGCGAGCGAACGGGGAGGAGcc                                                                                         >  1:2121288/1‑96 (MQ=16)
         tGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGGGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCagag                                                                                    <  2:3424362/100‑1 (MQ=18)
          gAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGc                                                                                   >  2:2329586/1‑100 (MQ=34)
          gAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATCCCCCCAGTAGCGGCGAGCGAACGGCGAGGGGCCCagaac                                                                                   >  2:522625/1‑98 (MQ=11)
            ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATTAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCCGAGCCt                                                                                 >  2:2782512/1‑100 (MQ=16)
            ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGgaggag                                                                                           >  2:3697099/1‑90 (MQ=33)
            ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt                                                                                 >  1:520186/1‑100 (MQ=34)
            ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt                                                                                 >  1:799979/1‑100 (MQ=34)
             gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGcc                                                                                         >  2:346857/1‑91 (MQ=34)
             gCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTg                                                                                <  1:4736900/100‑1 (MQ=34)
               gAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt                                                                                 >  2:534780/1‑97 (MQ=34)
               gAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGaa                                                                              <  2:1185681/100‑1 (MQ=34)
                 aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                                            <  1:340403/100‑1 (MQ=34)
                 aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                                            <  1:725173/100‑1 (MQ=34)
                 aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                                            <  1:422197/100‑1 (MQ=34)
                 aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                                            <  2:3306773/100‑1 (MQ=34)
                  ccGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGc                                                                                   >  2:1880363/1‑92 (MQ=33)
                   cGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAg                                                                          <  1:3273811/100‑1 (MQ=34)
                    gggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgt                                                                         >  1:1034697/1‑100 (MQ=34)
                     ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                                        >  1:2651937/1‑100 (MQ=34)
                     ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgt                                                                         >  1:4043310/1‑99 (MQ=34)
                      gggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGGGGAGACCAGAGCACGAATCAgtgt                                                                       >  2:936005/1‑100 (MQ=11)
                       ggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtg                                                                      <  1:2321242/100‑1 (MQ=33)
                         aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                                    <  2:258734/100‑1 (MQ=34)
                         aaCTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtg                                                                    <  1:1520788/100‑1 (MQ=34)
                           cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                                  <  2:2936693/100‑1 (MQ=34)
                           cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                                  <  1:3513110/100‑1 (MQ=34)
                           cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                                  <  1:1184930/100‑1 (MQ=34)
                            tGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtgt                                                                 >  2:2247775/1‑100 (MQ=34)
                             gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCAGACTCAgtgagcgtgt                                                                 >  2:3828934/1‑99 (MQ=11)
                              aaaCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtgt                                                                 <  1:1406177/98‑1 (MQ=34)
                              aaaCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGtt                                                                <  2:4539528/99‑1 (MQ=34)
                               aaCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAg                                                              <  1:2071944/100‑1 (MQ=34)
                                 cATCTAAGTACGCCGAGGAAAAGAAATCAACCGAGATGCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAg                                                              <  2:3823701/98‑1 (MQ=255)
                                 cATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTg                                                            >  1:3399572/1‑100 (MQ=34)
                                     tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCCGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt                                                                                 >  2:1152955/1‑75 (MQ=21)
                                     tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGCATCAGTGTGTGTGTTAGTGGAAg                                                        >  2:3177658/1‑100 (MQ=18)
                                     tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTgg                                                           >  1:4203901/1‑97 (MQ=34)
                                     tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTgg                                                           >  2:36826/1‑97 (MQ=34)
                                       aGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGGGAAGGGGGAGGAGc                                                                                          >  2:2943602/1‑64 (MQ=255)
                                       aGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                                        <  2:2520829/98‑1 (MQ=34)
                                       aGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCg                                                      >  1:3834931/1‑100 (MQ=34)
                                       aGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCg                                                      <  1:90829/100‑1 (MQ=34)
                                          aCCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCCGAGCCTGAAGCAGTGTGTGTGTTAGTGGAAGCg                                                      >  2:1245520/1‑97 (MQ=16)
                                          aCCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCt                                                   >  1:3368926/1‑100 (MQ=34)
                                            cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTGGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTgg                                                 <  2:1955368/100‑1 (MQ=18)
                                            cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAAGCAGTGTGTGTGGGAGTGGAAGc                                                       >  2:2725175/1‑94 (MQ=255)
                                             ccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGTGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTgg                                                 >  1:4710201/1‑99 (MQ=21)
                                                aGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAg                                             <  1:1774582/100‑1 (MQ=34)
                                                 ggAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACAGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGACAgg                                            >  2:2814398/1‑100 (MQ=255)
                                                  gAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAgg                                            <  2:1883343/99‑1 (MQ=34)
                                                  gAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATAAGTGTGGGTGTTAGTGGAAGc                                                       >  2:3822834/1‑88 (MQ=255)
                                                   aaaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGCGTGTTAGTGGAAGCGTCTGGACAGgcg                                          >  2:2356680/1‑100 (MQ=16)
                                                    aaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgc                                         >  1:2009251/1‑100 (MQ=34)
                                                    aaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgc                                         >  1:4260423/1‑100 (MQ=34)
                                                    aaaGAAACCAACCGAGATTGCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGCGCCTGAATCGGTGTGGGGGGGAGTGGAAGGGGCGGGAAAGgcg                                          >  2:4665797/1‑99 (MQ=11)
                                                      aGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcgc                                       <  2:3011888/100‑1 (MQ=34)
                                                      aGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcgc                                       <  1:177786/100‑1 (MQ=34)
                                                      aGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcgc                                       <  1:3382080/100‑1 (MQ=34)
                                                       gAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcgc                                       >  1:3055579/1‑99 (MQ=34)
                                                        aaaTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGa                                     <  1:2405724/100‑1 (MQ=34)
                                                        aaaTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGa                                     >  1:3054416/1‑100 (MQ=34)
                                                         aaTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGa                                     >  1:4300804/1‑99 (MQ=34)
                                                         aaTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGAt                                    <  1:3196064/100‑1 (MQ=34)
                                                         aaTCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGAt                                    <  1:4463906/100‑1 (MQ=34)
                                                           tCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATa                                   >  2:3702136/1‑99 (MQ=33)
                                                            cAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTAGAAAGGCGCGCGATa                                   >  1:4666805/1‑98 (MQ=21)
                                                             aaCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAg                                >  2:4072338/1‑100 (MQ=33)
                                                             aaCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAg                                <  1:4534375/100‑1 (MQ=34)
                                                             aaCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAg                                >  2:3344613/1‑100 (MQ=34)
                                                                cGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAggg                              <  1:2117907/99‑1 (MQ=34)
                                                                 gagaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGt                             >  1:1388503/1‑99 (MQ=34)
                                                                  agaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGa                           >  1:2155741/1‑100 (MQ=34)
                                                                   gaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGa                           >  2:4139512/1‑99 (MQ=34)
                                                                     ttCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAg                        <  1:3452627/100‑1 (MQ=34)
                                                                         cccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGcccc                    <  1:2958289/100‑1 (MQ=34)
                                                                          ccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCg                   <  1:627660/100‑1 (MQ=34)
                                                                          ccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCg                   <  2:4538446/100‑1 (MQ=34)
                                                                          ccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCg                   <  1:1855294/100‑1 (MQ=34)
                                                                          ccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCg                   <  1:775366/100‑1 (MQ=34)
                                                                          ccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCg                   <  2:1639078/100‑1 (MQ=34)
                                                                            aGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAg                        >  2:3844063/1‑93 (MQ=33)
                                                                            aGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTa                 <  1:2223887/100‑1 (MQ=33)
                                                                             gTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTac                <  1:272261/100‑1 (MQ=34)
                                                                             gTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTa                 >  2:4099261/1‑99 (MQ=33)
                                                                                  ggcgAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACaa            >  1:4373316/1‑99 (MQ=34)
                                                                                    cgagcgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACaaaaa         <  1:2589277/100‑1 (MQ=34)
                                                                                     gagcgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAAt        <  1:2545755/100‑1 (MQ=34)
                                                                                        cgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGca     >  2:1699888/1‑100 (MQ=34)
                                                                                        cgaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGca     >  2:202706/1‑100 (MQ=34)
                                                                                         gaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCNTCTGGAAAGGCGCGCGATACAGGGTGACAGCNCCGTACACAAAAANGca     >  2:3826131/1‑99 (MQ=21)
                                                                                         gaACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAACGcac    <  1:2703179/100‑1 (MQ=21)
                                                                                          aaCGGGGAGGGGCCGAGGACCTGAATCAGTGTGTGTGGTAGTTGAAGCGACAGGAAAGgcgcg                                        <  2:2480174/63‑1 (MQ=2)
                                                                                          aaCGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGcaca   >  1:4521337/1‑100 (MQ=33)
                                                                                          aaCGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGcaca   >  1:4063155/1‑100 (MQ=34)
                                                                                          aaCGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGcac    <  2:1766461/99‑1 (MQ=34)
                                                                                           aCGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACAt  >  2:2783932/1‑100 (MQ=34)
                                                                                            |                                                                                                  
ATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCGTACACAAAAATGCACAT  >  NC_000913_3_bme_pgi/225923‑226113

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.