New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	3243907 =	53 (1.150)	5 (0.110)	5/284	6.0	8.4%	coding (835/1413 nt)	uxaC	uronate isomerase
	?	NC_000913_3_bme_pgi	3243926 =	56 (1.220)					coding (816/1413 nt)	uxaC	uronate isomerase
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

AGTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAGCGGCGAAGTGATCCAGACGTTT  >  NC_000913_3_bme_pgi/3243784‑3244072                                                                                                                                               |                                                                                                                                                   aGTCAAAAGCTGCATCTGGCCCCAGCATTTTGAATTGACGCAGGTTGTTATTACGCAGTGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTGCCGCAGTGTTGTACTGCGCCACTTCg                                                                                                                                              <  2:277677/149‑1 (MQ=255)  gTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAAGGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCAcgtcgt                                                                                                                                             <  2:555672/149‑1 (MQ=255)         ccTACACCCGGCCCCGGCAGCTTGAACGGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTgctcgct                                                                                                                                      <  2:435568/149‑1 (MQ=255)           tACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATATGGTACTGCTGTACCCAGCCGCGACGTGCCTATTCGGCACCAAAGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCa                                                                                                                                    >  2:654337/1‑149 (MQ=255)             cATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAgg                                                                                                                                  <  1:558543/149‑1 (MQ=255)             cATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAgg                                                                                                                                  <  1:551421/149‑1 (MQ=255)                   gCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGCACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCCGGGTTTCg                                                                                                                            >  2:329120/1‑149 (MQ=255)                      ccAGCCGTTCGAACCGACGCAGGTTGCTATAACGCAGCGCGCCAATGCGGTACTGCTGTACCCAGCCGCGACGTGCAGATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGAGCTCGCTCAGGGTTTCgcca                                                                                                                         <  2:52285/149‑1 (MQ=255)                      ccAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCgcca                                                                                                                         <  2:124212/149‑1 (MQ=255)                      ccAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCgcca                                                                                                                         <  1:73132/149‑1 (MQ=255)                              ttGACCTGACGCAGGCCTGTATGACGCAGCGCGCCAAAGCGGTACTCCTGTACCCAGCCGCGACGTGCATATCCTGCACCAAGGAACACCAGTACCGCAGTTTTGACCCGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACg                                                                                                                 <  2:428848/149‑1 (MQ=255)                                  aCTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGgcgc                                                                                                             >  2:92523/1‑149 (MQ=255)                                  aCTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGccgt                                                                                                             >  2:806540/1‑148 (MQ=255)                                      aCGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCa                                                                                                         >  2:170662/1‑149 (MQ=255)                                      aCGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCa                                                                                                         <  1:51166/149‑1 (MQ=255)                                         cacggtgttATTACGCAGCGCGCTCATGTGGCACTGCTGTACCCAGCCGCGACTTGCATATTCGGCACCAAGGAACAGCAGTACCGCATTGTTGAACCGCGGCACTTCGTGCTCGCCTAGGGTTTCGCCAGACAGCCGGCGAGCCAGaa                                                                                                      <  2:596085/144‑1 (MQ=255)                                          aGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAAt                                                                                                     >  1:369374/1‑149 (MQ=255)                                              tgttATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTg                                                                                                 <  1:170662/149‑1 (MQ=255)                                                  attaCGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCa                                                                                             <  1:323983/149‑1 (MQ=255)                                                       gCAGCGCGCCAATGTTGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTcc                                                                                        <  2:464001/149‑1 (MQ=255)                                                                    gtgGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCGGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCtt                                                                           <  2:30417/149‑1 (MQ=255)                                                                       gTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAg                                                                        >  1:134091/1‑149 (MQ=255)                                                                        tACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGc                                                                       >  1:304264/1‑149 (MQ=255)                                                                           tgctgTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCCTCCTTCGCTCCAGCaac                                                                    >  2:633597/1‑148 (MQ=255)                                                                             ctgTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACa                                                                  >  1:683266/1‑149 (MQ=255)                                                                                tACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATca                                                               >  1:325536/1‑149 (MQ=255)                                                                                 aCCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATcac                                                              >  2:513584/1‑149 (MQ=255)                                                                                 aCCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATcac                                                              <  1:489433/149‑1 (MQ=255)                                                                                 aCCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGCCGCGCCAGAATGCTGTCCAGTTCCGCTTCCTTCGCTTCAGCAAACATcac                                                              >  2:513571/1‑149 (MQ=255)                                                                                  cccAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCGGCATCCGGCTCGCCCAGGGGTGCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCACTTCAGCAAACATcacc                                                             >  1:795838/1‑149 (MQ=255)                                                                                  cccAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATcacc                                                             <  1:92523/149‑1 (MQ=255)                                                                                              gTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGt                                                                                                                                             <  1:717322/57‑1 (MQ=255)                                                                                              gTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGt                                                                                                                                             >  2:717322/1‑57 (MQ=255)                                                                                                 cATATTCGGCACCAAGCAACACCAGTAACGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCCGCAAACATCACCACGTCCAGCGCgggg                                              >  2:551998/1‑149 (MQ=255)                                                                                                        ggCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCGGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCatcca                                       >  1:345919/1‑145 (MQ=255)                                                                                                           aCCAAGGAACACCAGTACCGCAGTTTGAAACTGCGCCACTTCGTGCTCGCCCAGGGTTTCGCAAACCAGGCGGCGCCCCAGAATACTGTCCAGTTCCGCTCCGTTCGCTTCCGCAAACATCAACACAACCACCGCGTGGTCAGagacct                                    >  2:137400/1‑147 (MQ=255)                                                                                                             cAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTa                                  >  2:606000/1‑149 (MQ=255)                                                                                                              aaGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTAc                                 <  1:272182/149‑1 (MQ=255)                                                                                                                  aaCACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTGGCTTCAGCCAACATCACCCCATCCAGCGCTTGGTCAGACACTTTACGGcc                             >  1:221304/1‑149 (MQ=255)                                                                                                                       cAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGaa                                                                                                      <  1:40644/71‑1 (MQ=255)                                                                                                                       cAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGaa                                                                                                      >  2:40644/1‑71 (MQ=255)                                                                                                                       cAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGaa                                                                                                      <  1:38425/71‑1 (MQ=255)                                                                                                                       cAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGaa                                                                                                      >  2:38425/1‑71 (MQ=255)                                                                                                                       cAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGGGAg                        >  1:228588/1‑149 (MQ=255)                                                                                                                             cGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAGCGGCGa                  >  1:65260/1‑149 (MQ=255)                                                                                                                               cAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCCGCGCGTGTTCAGACACTTTACAGCCGTGAGCGGCGAAg                >  1:149982/1‑149 (MQ=255)                                                                                                                                     tGACCTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAGCGGCGAAGTGATcc          <  2:54384/149‑1 (MQ=255)                                                                                                                                       aaCTGGGGCACCTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAGCGGCGAAGTGATCCAg        <  1:207652/149‑1 (MQ=255)                                                                                                                                        aCTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAAACACTTTACAGCCGTGAGCGGCGGAGTGATCCAGa       >  2:294728/1‑149 (MQ=255)                                                                                                                                        aCTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCACGACCGAATGCTGTCCAGTGCCGCTTCGCTCCCTTCACAAAACATAACCACAGCCCGCGCGTGGTCTGACACTTGACACCCGCAAGCGGCGAAGGGATCCGGa       >  2:358181/1‑149 (MQ=255)                                                                                                                                         cTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAGCGGCGAAGTGATCCAGAc      <  1:687262/149‑1 (MQ=255)                                                                                                                                          tGCGCCACTTCGTGCTCGCTCAGGGCTTCGACAGCCAGACGGCGCGCCAGAATGCTGACCAGTTCCGCTTCGTTCGCTTCCGCAAACGTCACCACCTCCAGCGCGTGGTCAGACACCTTCCAGCCGTAAGCGACCAAGTAGTCCAGAcc     >  2:30451/1‑148 (MQ=255)                                                                                                                                             gcCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACAt                                                                 <  1:74047/86‑1 (MQ=255)                                                                                                                                             gcCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACAt                                                                 >  2:74047/1‑86 (MQ=255)                                                                                                                                             gcCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAGCGGCGAAGTGATCCa         <  2:622870/142‑1 (MQ=255)                                                                                                                                             gcCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAGCGGCGAAGTGATCCa         >  1:622870/1‑142 (MQ=255)                                                                                                                                             gcCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAGCGGCGAAGTGATCCAGACGttt  <  1:654337/149‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                   AGTCAAAGCCTACATCCGGCCCCAGCAGTTTGAACTGACGCAGGTTGTTATTACGCAGCGCGCCAATGTGGTACTGCTGTACCCAGCCGCGACGTGCATATTCGGCACCAAGGAACACCAGTACCGCAGTTTTGAACTGCGCCACTTCGTGCTCGCTCAGGGTTTCGCCAGCCAGACGGCGCGCCAGAATGCTGTCCAGTTCCGCTTCGTTCGCTTCAGCAAACATCACCACATCCAGCGCGTGGTCAGACACTTTACAGCCGTGAGCGGCGAAGTGATCCAGACGTTT  >  NC_000913_3_bme_pgi/3243784‑3244072

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.