New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 2673805	NA (NA)	4 (0.110) +CTACATATCGACGATGATCAAGCTTTCCT	3/226	6.1	NA	noncoding (30/34 nt)	REP185 (repetitive extragenic palindromic) element; contains 1 REP sequences	REP185 (repetitive extragenic palindromic) element; contains 1 REP sequences
	?	NC_000913_3_bme_pgi	4235376 =	NA (NA)					intergenic (‑2143/‑531)	lysC/yjbE	lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein
Rejected: Coverage evenness skew score above cutoff.

GGTTGGGCCAAATATGATTAATTTCTGGAAGAATGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTCCAGACAGAAGAAATCAAA  >  NC_000913_3_bme_pgi/2673663‑2673950                                                                                                                                               |                                                                                                                                                  ggTTGGGCCAAATATGATTAATTTCTGGAATAATGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCGATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTtaa                                                                                                                                             <  2:21252/149‑1 (MQ=255)        ccAAATATGATTAATTTCTGGAAGAATGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCACTTTCTCTCGATCGGCGTTAGGAAAGATACCGGATGCGGCGTGAACGCCTTATCCAGCATTTACTACATTa                                                                                                                                      >  2:65423/1‑149 (MQ=255)        ccAAATATGATTAATTTCTGGAAGAATGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTa                                                                                                                                      >  2:306052/1‑149 (MQ=255)              atGATTTATTTCCGGAATAAGCTCAGTATCAGTTGCGCGTTCTTGCTATTGGTAATTACCGGGCCGGGGGCAGTTGCTCTCGATCGGCGTTAGGAACGATGCCGGATTCGGCTTGAACGCCTTATCCGGCATTTAATAAATTACAGCCa                                                                                                                                <  2:785193/149‑1 (MQ=255)               tGATTAATTTCTGGAAGAATGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCAc                                                                                                                               <  1:39981/149‑1 (MQ=255)                          tGGAAGAATGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCAACTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCaa                                                                                                                    <  2:739252/149‑1 (MQ=255)                            gaagaaTGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACACCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCaaag                                                                                                                  >  1:634030/1‑147 (MQ=255)                               caaTGTCAGTATCGCTGGCGCGTGCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCCTTAGGAAAGATGCAGGACGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCAGTCTACCCGCAACGACa                                                                                                               >  2:771301/2‑149 (MQ=255)                                    tCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATccct                                                                                                          >  1:783196/1‑149 (MQ=255)                                                  gcgTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTc                                                                                            >  2:829751/1‑149 (MQ=255)                                                         tGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGt                                                                                     <  1:107083/149‑1 (MQ=255)                                                           cTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGc                                                                                   >  1:271740/1‑149 (MQ=255)                                                                 gCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCCGGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCCCTGAAGTTCTTAAATCCCCTGGTGcccagcc                                                                             >  2:21627/1‑143 (MQ=255)                                                                   aaTTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCaa                                                                           >  1:139546/1‑149 (MQ=255)                                                                          gggccgggGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGAGGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGCTGCTAGCGCAATGAGCTc                                                                    >  1:661268/1‑149 (MQ=255)                                                                                  ggCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCtt                                                            >  1:223512/1‑149 (MQ=255)                                                                                  ggCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCtt                                                            <  1:702569/149‑1 (MQ=255)                                                                                      aTTTCTCTCGAGCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAGCGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCgg                                                        <  1:632714/149‑1 (MQ=255)                                                                                          ctctcGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCga                                                    <  2:139546/149‑1 (MQ=255)                                                                                           tctcGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTGGCGCAATGAGATCACCCCCTTCCGGCCgat                                                   >  2:526955/1‑149 (MQ=255)                                                                                           tctcGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGCGATCACCCCCTTCCGGGCggt                                                   >  2:214491/1‑147 (MQ=255)                                                                                               gATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGGTAGCGCAATGAGATCAGCTCCTTCCGGGCgatgatg                                               >  1:140150/1‑149 (MQ=255)                                                                                                aacGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATCACAGCCACTCTACCCGCAACGACATCTCTGAAGTCGTTGATTCCCCAGGTGCTAGCACAATGAGAACACCCCCTTCCGGGCgatcatga                                              >  2:26469/3‑149 (MQ=255)                                                                                                aTCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCgatgatga                                              >  2:228839/1‑149 (MQ=255)                                                                                                       ttAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCCACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTCGTGAAATGAGGTCACCACCTTCCGGGCTATGATGtgcatctg                                       >  1:305712/1‑147 (MQ=255)                                                                                                       ttAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGCGATCACCCCCTTCCGGGCGATGATGATCATCCg                                       >  1:289056/1‑149 (MQ=255)                                                                                                             acgATGCCTGATGCGGCGTGAACGTCTTATACGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCACTGGTGCTAGCGCAATGAGCTCACCCCCTTCCGGGGGAGGCTGATCCTCCGGCGCAt                                 <  2:201464/147‑1 (MQ=255)                                                                                                                     ggATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATc                         >  1:292280/1‑149 (MQ=255)                                                                                                                          cggcgTGAAAGCCATATACGGCATTTAAAACATTACAACCCATCTACCGGGCACGCTATTGCTGAATTTGGTGATTCCCCTGGTGCTAGCTCAATGTTATCACCCCCTTCCGGGCGATGATCATCATCCGGCGCATGGCTCATCGGTTc                    <  2:823955/149‑1 (MQ=255)                                                                                                                            gcgTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTGCCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTCca                  <  2:738859/149‑1 (MQ=255)                                                                                                                              gTGAACGCCTTATCCGGCATTTAATAAGTTACAGCCGCTCTACCCGCAACGACATCTCTGAAGTTGGTGATTCCCCTGGTGCTAGCGCAAGGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTCcaga                <  1:383796/149‑1 (MQ=255)                                                                                                                                  aCGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGCTCCTCCGGCGCATGGCCCATCGGTTCcagacaga            >  2:58338/1‑149 (MQ=255)                                                                                                                                       ttATCCTGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTCCAGACAGAAGaaa       <  1:306052/149‑1 (MQ=255)                                                                                                                                         aTCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTCCAGACAGAAGAAATc     >  1:306063/1‑149 (MQ=255)                                                                                                                                         aTCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTCCAGACAGAAGAAATc     <  1:263912/149‑1 (MQ=255)                                                                                                                                         aTCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTCCAGACAGAAGAAATc     >  1:438992/1‑149 (MQ=255)                                                                                                                                            cGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTCCAGACAGAAGAAATCaaa  <  1:122277/149‑1 (MQ=255)                                                                                                                                            cGGCATTTAAAAATTTACAGCCACTCTACCCGCAACGACAGCTCTGAAGTTGTTGATTCCGCTGGTGCTAGCGCAATGAGATCATCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTCCAGACAGAAGAAATCaaa  <  2:424314/149‑1 (MQ=255)                                                                                                                                               |                                                                                                                                                  GGTTGGGCCAAATATGATTAATTTCTGGAAGAATGTCAGTATCGCTGGCGCGTTCTTGCTATTGGCAATTACCGGGCCGGGGGCAATTTCTCTCGATCGGCGTTAGGAAAGATGCCGGATGCGGCGTGAACGCCTTATCCGGCATTTAATAAATTACAGCCACTCTACCCGCAACGACATCTCTGAAGTTGTTGATTCCCCTGGTGCTAGCGCAATGAGATCACCCCCTTCCGGGCGATGATGATCATCCGGCGCATGGCTCATCGGTTCCAGACAGAAGAAATCAAA  >  NC_000913_3_bme_pgi/2673663‑2673950

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.