New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi 1207790 =10 (0.210)38 (0.900) 37/252 0.2 84.6% coding (290/630 nt) stfP e14 prophage; uncharacterized protein
?NC_000913_3_bme_pgi 1209619 = 5 (0.120)pseudogene (1/501 nt) stfE pseudogene, e14 prophage; side tail fiber protein fragment family;Phage or Prophage Related

GCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGG  >  NC_000913_3_bme_pgi/1207643‑1207937
                                                                                                                                                   |                                                                                                                                                   
ggagtgtggtggaggaATGCGGTGCCAGCCTTGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTT                                                                                                                                                    <  2:206793‑M1/144‑1 (MQ=255)
gcatcctgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgtt                                                                                                                                                    <  1:717549‑M1/2‑1 (MQ=255)
 cAGCGTGGTGGGGGCATCCGGTGTCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTATCGCACTTCGCGCGCTGCTGGTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                                   <  1:223078‑M1/149‑1 (MQ=255)
 cAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                                   <  1:314889‑M1/149‑1 (MQ=255)
 cAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCCGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTG                                                                                                                                                   <  1:574524‑M1/149‑1 (MQ=255)
      tgcacagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTg                                                                                                                                              <  2:536809‑M1/8‑1 (MQ=255)
       ggtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGG                                                                                                                                             <  2:330137‑M1/149‑1 (MQ=255)
       gcacagttcagggcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTgg                                                                                                                                             >  2:50901‑M1/141‑149 (MQ=255)
        gttgaggCGGCCGGGGCCATCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTGCGCGCGCTGCGGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG                                                                                                                                            <  2:668858‑M1/146‑1 (MQ=255)
        gtggAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGG                                                                                                                                            <  1:308884‑M1/149‑1 (MQ=255)
        aacagtccagcgcattacgttgtagatctgtgttcaggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTggg                                                                                                                                            <  2:731195‑M1/10‑1 (MQ=255)
          cagttcagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGgag                                                                                                                                          >  1:536809‑M1/138‑149 (MQ=255)
             ttaagcgcattacgttgtagatctgtgttctggtcatttgttgatacgcggacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAg                                                                                                                                       <  1:245489‑M1/15‑1 (MQ=255)
                agcgcattacgttgtagatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAg                                                                                                                                    <  1:720312‑M1/18‑1 (MQ=255)
                 tCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTACGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCCTGGTTTGGGAGAAGGctc                                                                                                                                   >  2:444305‑M1/1‑146 (MQ=255)
                 tCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGGGAAGGctc                                                                                                                                   >  2:32647‑M1/1‑146 (MQ=255)
                 tCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctc                                                                                                                                   >  1:572102‑M1/1‑146 (MQ=255)
                 tCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGc                                                                                                                                   >  1:325919/1‑149 (MQ=255)
                     actacgttgtagatccgtgttctggtcatttgttgatacgcgtacataggcaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCaaaa                                                                                                                               >  2:330955‑M1/127‑149 (MQ=255)
                          aGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGa                                                                                                                                     >  2:431473/1‑138 (MQ=255)
                          aGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGa                                                                                                                                     <  1:431473/138‑1 (MQ=255)
                               agatctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGTGCAAAACTCAATgcag                                                                                                                     >  1:731195‑M1/117‑149 (MQ=255)
                                  gaAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCCATGCAGCaa                                                                                                                  >  2:490283/1‑149 (MQ=255)
                                   ctgtgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccgtggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAAc                                                                                                                 <  1:28926‑M1/37‑1 (MQ=255)
                                    aGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtc                                                                                                                <  1:778844‑M1/149‑23 (MQ=255)
                                    aGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtc                                                                                                                <  1:778164‑M1/149‑23 (MQ=255)
                                      tgttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttctaaattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGc                                                                                                              >  2:765686‑M1/110‑149 (MQ=255)
                                       ggcgtcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccg                                                                                                             <  1:645701‑M1/149‑26 (MQ=255)
                                        ttctggtcatttgttgatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGAAAAACTCAATGTAGCAACGGCTa                                                                                                            <  1:300769‑M1/42‑1 (MQ=255)
                                          ggcACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAAACACATGGCACTGTGCAAACGGCTCACGAAAACCTTGGTTTAGGAGAAAGctcgtcattacctgttggtgccccggtt                                                                                                          >  1:484187‑M1/1‑121 (MQ=255)
                                          ctggtcatttgttcatacgcgtacatagccaataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgattgggatttctgcattttcatcaaagTCGGCTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACa                                                                                                          >  1:785471‑M1/106‑149 (MQ=255)
                                               gACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGAGTTAAGGAATTGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtg                                                                                                     <  1:820695‑M1/149‑34 (MQ=255)
                                               gACCAGTTACTTACCGCACTGCGCGCGTTGCTGTTAAGCAGGAAGACTCCGTTTTGCTATATCAAATCGGATGGCACTGTGTAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGCctctgcattacctgttggtgtcccggttccgtg                                                                                                     <  2:52274‑M1/149‑34 (MQ=255)
                                                       acttacAGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCACACGGCTCTCGAAAACCTTTGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcag                                                                                             >  1:452616‑M1/1‑108 (MQ=255)
                                                        cttacCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagc                                                                                            <  1:498300‑M1/149‑43 (MQ=255)
                                                            ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgt                                                                                                                 >  2:428682‑M1/1‑103 (MQ=255)
                                                            ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgt                                                                                                                 >  2:428712‑M1/1‑103 (MQ=255)
                                                            ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgt                                                                                                                 <  1:428712‑M1/124‑22 (MQ=255)
                                                            ccGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgt                                                                                                                 <  1:428682‑M1/124‑22 (MQ=255)
                                                              gCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGTATGGCACTGTGCAAACGGCTCTCGAAATCCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactcc                                                                                      <  2:669334‑M1/149‑49 (MQ=255)
                                                                    agccaaaaagcatgttaaatccccctggtaaacgcaggaatgatgccacttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCtat                                                                                >  1:21287‑M1/80‑149 (MQ=255)
                                                                       caataagcatgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATAcc                                                                             >  2:133851‑M1/77‑149 (MQ=255)
                                                                            gctgTTAAGCTGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTa                                                                        <  2:351749/149‑1 (MQ=255)
                                                                              catgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATg                                                                      <  1:423488‑M1/80‑1 (MQ=255)
                                                                                tgttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                                                                    <  1:567925‑M1/82‑1 (MQ=255)
                                                                                tgttaaatccccctggtaaaagcaggaatgatgccatttgcttggtatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAt                                                                    >  1:359154‑M1/68‑149 (MQ=255)
                                                                                 gttaaatccccctggtaaaagcaggaatgatgcaatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGAtt                                                                   <  1:496704‑M1/83‑1 (MQ=255)
                                                                                  ttaaatccccctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATtg                                                                  <  1:475115‑M1/84‑1 (MQ=255)
                                                                                      cGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaa                                                              >  1:803438‑M1/1‑77 (MQ=255)
                                                                                      cGCAAGAATCCGGTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcatgacctgttggtgtcccggttccgtggccttcagccactccgcccacaggctggctcacatgcaa                                                              >  1:741629‑M1/1‑77 (MQ=255)
                                                                                            ctggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGa                                                        >  1:18831‑M1/56‑149 (MQ=255)
                                                                                             tggtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAg                                                       >  1:536394‑M1/55‑149 (MQ=255)
                                                                                             aTCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttattccactccgccaacaggctggctgaaatgcaatggtgcc                                                       <  1:827178‑M1/149‑80 (MQ=255)
                                                                                               gtaaaagccggaatgatgccatttgcttgttatttcttcattttcatacacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCa                                                     >  1:344701‑M1/53‑149 (MQ=255)
                                                                                               gtaaaagcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCa                                                     <  1:22504‑M1/97‑1 (MQ=255)
                                                                                                 gTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgccatggtgccgctt                                                   >  1:474148‑M1/1‑66 (MQ=255)
                                                                                                 aaaagcagtaaggatgccttttgcttgttatttgttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAAt                                                   >  2:717549‑M1/51‑149 (MQ=255)
                                                                                                   acgaaggattcaggccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCa                                                 >  1:570316‑M1/49‑149 (MQ=255)
                                                                                                    cgctggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACAATAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAg                                                >  1:139214‑M1/48‑149 (MQ=255)
                                                                                                    agcaggaatgatgccatttgcttgttatttcttcattttcataaacgTTGGTTTGGGAGTGAGTTCAGAACTCAATGTGGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAg                                                <  1:823441‑M1/102‑1 (MQ=255)
                                                                                                    agcaggaatgatgccatttgcttgatatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAg                                                >  1:139166‑M1/48‑149 (MQ=255)
                                                                                                     ggCGGTATGAAATCGGGTGGCACTGTGCCAACGGCTTTCGAAAACCTTGGTTTGGGAGAAGGctctgctgtacctgttggtgtcccggttccggggccttcagccattccgccaacaggctggctgaaatgcaatggtgccgctttttc                                               <  2:364865‑M1/149‑88 (MQ=255)
                                                                                                     ggCGATATCAAATCGGATGGCACTGCGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatgttgccgctttttc                                               <  1:821808‑M1/149‑88 (MQ=255)
                                                                                                        gttatcaAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgc                                            <  1:349498‑M1/147‑91 (MQ=255)
                                                                                                         gaatggtgccatttgcttgttatttcttcattttcatgaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATc                                           >  2:256546‑M1/43‑149 (MQ=255)
                                                                                                            tCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgac                                        <  2:221926‑M1/149‑95 (MQ=255)
                                                                                                                 tCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGatctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctactgaagaata                                   >  2:304689‑M1/1‑50 (MQ=255)
                                                                                                                  catttgctttttatttcttcatttgcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgg                                  >  1:325626‑M1/34‑149 (MQ=255)
                                                                                                                      tgctttgtatttctttaatttcataaacgGTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGTAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGt                              >  2:527496‑M1/30‑149 (MQ=255)
                                                                                                                      tGGCACTGTGCAAACGGCTCTCGAAAACCTTGTTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccatggccttcagccactccgccatcaggctggctgaaatgcaatggtgccgctttttctgctgaagaataaccgg                              >  2:792407‑M1/1‑45 (MQ=255)
                                                                                                                          tgttatttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCGGCGCCTACATTAGGACGTACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGaa                          >  1:194893‑M1/26‑149 (MQ=255)
                                                                                                                          acggtgCAAACGGCTCTCGAAAACCTTGGTTCGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGaa                          <  1:440487/146‑1 (MQ=255)
                                                                                                                          aCTGTGCAAACGGCTCCTGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGaa                          <  1:443665/149‑1 (MQ=255)
                                                                                                                                ttcttcattttcatacacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGc                    >  1:209987‑M1/20‑149 (MQ=255)
                                                                                                                                ttcttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGc                    <  1:330596‑M1/130‑1 (MQ=255)
                                                                                                                                  cttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                      <  2:383691‑M1/128‑1 (MQ=255)
                                                                                                                                  cttcattttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGcc                      >  1:383691‑M1/18‑145 (MQ=255)
                                                                                                                                   ttcattttcataaacgTTGGTTTGGGAGAAGGACCAAAACTCCATGCAGCAACGGCTACATTAGGACGCACCGCTTTCATAGCTATACCGGTTATGATTGCTGGTATTGCGCAATCAGCAAACATTCAGTGGGTGGGGGCTGCCgcagc                 <  2:124889‑M1/133‑3 (MQ=255)
                                                                                                                                      attttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGc              <  1:331710‑M1/136‑1 (MQ=255)
                                                                                                                                        tttcataaacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAt            <  2:546740‑M1/138‑1 (MQ=255)
                                                                                                                                        tctcGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCAt            >  1:543844/1‑149 (MQ=255)
                                                                                                                                          tcGAAAACCTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggggccgcttttgctgctgcagaatacccggaactggcaaaggcgtatccg          >  1:23685‑M1/1‑25 (MQ=255)
                                                                                                                                               aacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa                                                                                                       <  2:326257‑M1/47‑1 (MQ=255)
                                                                                                                                               aacgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTa                                                                                                       >  1:326257‑M1/5‑51 (MQ=255)
                                                                                                                                                 cgTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTg   >  2:331710‑M1/3‑149 (MQ=255)
                                                                                                                                                  gTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTgg  <  1:748001‑M1/148‑1 (MQ=255)
                                                                                                                                                  cTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataa  >  1:687425‑M1/1‑17 (MQ=255)
                                                                                                                                                  cTTGGTTTGGGAGAAGGctctgcattacctgttggtgtcccggttccgtggccttcagccactccgccaacaggctggctgaaatgcaatggtgccgctttttctgctgaagaatacccggaactggcaaaggcttatccgacaaataa  >  1:210395‑M1/1‑17 (MQ=255)
                                                                                                                                                  cTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgg                                  >  2:186529/1‑117 (MQ=255)
                                                                                                                                                  cTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTgg                                  <  1:186529/117‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
GCAGCGTGGTGGAGGCATCCGGTGCCAGCCTGGAGAAGGGGCGGCACGACCAGTTACTTACCGCACTTCGCGCGCTGCTGTTAAGCCGCAAGAATCCGTTTGGCGATATCAAATCGGATGGCACTGTGCAAACGGCTCTCGAAAACCTTGGTTTGGGAGAAGGAGCAAAACTCAATGCAGCAACGGCTACATTAGGACGCACCGGTTTCATAGCTATACCGGTTATGATTGGTGGTATTGAGCAATCAGTAATCATTCAGTGGGGGTGGAATGCCGCAAAAGCATCTGCCTCTGG  >  NC_000913_3_bme_pgi/1207643‑1207937

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.