New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi = 225998NA (NA)44 (0.220) 19/188 17.7 NA noncoding (240/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
?NC_000913_3_bme_pgi = 226015 NA (NA)noncoding (257/2904 nt) rrlH 23S ribosomal RNA of rrnH operon
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 134 total aligned reads displayed.

ATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCG  >  NC_000913_3_bme_pgi/225923‑226096
                                                                           |                                                                                                  
aTAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGggagg                                                                            <  2:1297337/100‑1 (MQ=31)
aTAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGggagg                                                                            <  1:4568407/100‑1 (MQ=31)
    gTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGcc                                                                        >  1:2104450/1‑100 (MQ=34)
    gTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGcc                                                                        <  2:296416/100‑1 (MQ=33)
     ttAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGATGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGccc                                                                       <  2:483909/100‑1 (MQ=21)
     ttAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGccc                                                                       <  1:5242830/100‑1 (MQ=33)
        aTGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGggagg                                                                            <  2:3932672/92‑1 (MQ=31)
        aTGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCaga                                                                    <  1:2116792/100‑1 (MQ=33)
         tGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCagag                                                                   >  1:2365127/1‑100 (MQ=34)
         tGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCagag                                                                   >  2:1656996/1‑100 (MQ=34)
          gAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGCGCGAACGGGGGGGAGCCCCGAGc                                                                  >  2:1482146/1‑100 (MQ=255)
          gAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGc                                                                  >  2:1481659/1‑100 (MQ=33)
          gAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGc                                                                  >  1:3844456/1‑100 (MQ=34)
           aGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGcc                                                                 <  1:1278730/100‑1 (MQ=34)
           aGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGcc                                                                 <  1:4019297/100‑1 (MQ=34)
            ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGCGCGAACGGGGAGGAGCCCAGAGCCt                                                                >  2:733052/1‑100 (MQ=18)
            ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt                                                                >  1:639057/1‑100 (MQ=34)
            ggCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCt                                                                >  2:1246993/1‑100 (MQ=33)
             gCGAACCGGGGGAACTGAAACATCTAAGAAAACAGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTg                                                               <  2:5033435/100‑1 (MQ=11)
               gAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGaa                                                             >  1:2878418/1‑100 (MQ=34)
                 nccGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAAt                                                            >  1:1829454/2‑99 (MQ=21)
                 aCCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATc                                                           <  1:2405250/100‑1 (MQ=34)
                  ccGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAAGCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGaa                                                             <  2:924483/97‑1 (MQ=18)
                  ccGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAAt                                                            >  1:3784096/1‑98 (MQ=34)
                  ccGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAAt                                                            >  1:4388962/1‑98 (MQ=34)
                   cGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAg                                                         <  1:1231202/100‑1 (MQ=34)
                    gggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgt                                                        >  1:3026163/1‑100 (MQ=34)
                    gggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgt                                                        <  2:2229380/100‑1 (MQ=33)
                    gggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAACCAgt                                                        >  2:1921944/1‑100 (MQ=21)
                     ggggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtg                                                       <  2:2956445/100‑1 (MQ=34)
                      gggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgt                                                      <  2:2980555/100‑1 (MQ=34)
                       ggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtg                                                     <  1:5049308/100‑1 (MQ=34)
                       ggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtg                                                     <  2:4522333/100‑1 (MQ=33)
                       ggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgt                                                      >  1:899985/1‑99 (MQ=33)
                       ggAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgt                                                      >  1:4484825/1‑99 (MQ=33)
                           cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                 >  1:4770059/1‑100 (MQ=34)
                           cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                 >  1:1148070/1‑100 (MQ=33)
                           cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtg                                                 <  1:2222568/100‑1 (MQ=34)
                           cTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgt                                                  >  1:4591826/1‑99 (MQ=34)
                             gAAACATCTAAGTACCCCGAGGGAAAGAAATCAACCGAGACTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCCGAGCATGAATCAgtgtgcgtgt                                                >  2:3861044/1‑99 (MQ=11)
                             gAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAgtgtgtgtgt                                                >  1:4307708/1‑99 (MQ=34)
                               aaCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAg                                             <  1:3740313/100‑1 (MQ=34)
                               aaCATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAg                                             <  1:3302355/100‑1 (MQ=34)
                                  aTCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTg                                           >  1:103796/1‑99 (MQ=34)
                                   tCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTgg                                          >  1:2095330/1‑99 (MQ=33)
                                   tCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGGGTGTGTGTTCGTgg                                          >  2:4159508/1‑99 (MQ=255)
                                     tAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                       >  2:3059976/1‑100 (MQ=33)
                                       aGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGa                                         <  1:392488/96‑1 (MQ=34)
                                       aGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGa                                         <  1:4914491/96‑1 (MQ=34)
                                       aGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGGAGCg                                     <  2:4415835/100‑1 (MQ=21)
                                       aGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                       <  1:521551/98‑1 (MQ=34)
                                       aGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAg                                       <  1:2525425/98‑1 (MQ=34)
                                           ccccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTg                                 >  1:4267568/1‑100 (MQ=34)
                                            cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGGGCCCAGAGCCTGAATCAGGGTGTGCGTTAGTGGAAGCGCCTg                                 >  2:1474057/1‑99 (MQ=11)
                                            cccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTg                                 <  2:899847/99‑1 (MQ=34)
                                             ccGAGGACAAGCAATCAACCGAGAATCCCCCAGCTGCGGCCAGCGAACGGGGAGGAGCACAGAGTCTGAATCAGTGTGTGTGTTAGTGGCAGCGCCTgg                                >  2:2915037/1‑99 (MQ=11)
                                             ccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGGGCCCAGAGCCGGAAGCAGTGGGTGTGGGCGTGGAAGCGTCggg                                >  2:4254931/1‑99 (MQ=11)
                                             ccGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGa                               <  1:3082315/100‑1 (MQ=34)
                                               gAGGAAAAGAAATCAGCCGAGAGTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGc                                      <  2:4954763/91‑1 (MQ=255)
                                               gAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGaaa                             <  1:127366/100‑1 (MQ=34)
                                               gAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGaaa                             <  2:4501710/100‑1 (MQ=34)
                                                 ggAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGGAGCGTCTGGCAAgg                           >  2:1608802/1‑100 (MQ=255)
                                                 ggAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAgg                           <  1:4571849/100‑1 (MQ=34)
                                                 ggAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAgg                           <  1:3053842/100‑1 (MQ=34)
                                                   aaaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGAGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTGAGTGGAAGCGTCTGGAAAGgc                          >  2:3625795/1‑99 (MQ=255)
                                                    aaaGCAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGGGGTAGTGGAAGCGGCTGGAAAGgcg                         >  2:114820/1‑99 (MQ=11)
                                                    aaaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcg                         >  1:2938898/1‑99 (MQ=33)
                                                     aaGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTGTGGAAAGgc                          >  2:4280688/1‑97 (MQ=21)
                                                      aGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcgc                      >  1:728925/1‑100 (MQ=34)
                                                      aGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGgcgcgc                      <  2:4064476/100‑1 (MQ=34)
                                                      aGAAATCAACCGAGATTCCCCCAGCCGCGGCGAGCGAACGGGGAGGAGCCCAGAGc                                                                  >  2:3786197/1‑56 (MQ=11)
                                                       gAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTg                                 >  2:2831826/1‑88 (MQ=33)
                                                            cAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATa                  >  1:1607354/1‑98 (MQ=34)
                                                             aaCCGAGATTCCCCCAGTAGCGGCGAGCCAACGGGGAGGAGGCCAGCGCCTGAACCAGAGCGTGTGGGAGTGGAAGCGTCCGGAGAGGCGCGCGCTACAg               >  2:2593138/1‑100 (MQ=11)
                                                              aCCGGGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGATCCTGAAGCAGTGTGTGTGtt                                               <  2:1003901/67‑1 (MQ=11)
                                                              aCCGAGATTCCCCGAGGAGCGGCGGGCGAACGGGGAGGAGCCCAGAGCCTGAAGCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAg               <  2:4096121/99‑1 (MQ=11)
                                                              aCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGCAAGGCGCGCGATACAgg              >  1:355137/1‑100 (MQ=21)
                                                              aCCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCGGAATCAGTGTGTGTGTTAGTGGCAGCCGCTGGAGAGGCGCGCGCTACAg               >  2:4373350/1‑99 (MQ=11)
                                                               ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAggg             <  1:1723217/100‑1 (MQ=34)
                                                               ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAggg             <  1:2307726/100‑1 (MQ=34)
                                                               ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAggg             <  2:251751/100‑1 (MQ=34)
                                                               ccGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAggg             <  2:2246049/100‑1 (MQ=33)
                                                                cGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGt            <  1:2327625/100‑1 (MQ=34)
                                                                cGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGt            <  1:575627/100‑1 (MQ=34)
                                                                 gagaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGt            >  2:3596326/1‑99 (MQ=34)
                                                                 gagaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGt            >  1:4772678/1‑99 (MQ=34)
                                                                 gagaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTg           <  2:2250420/100‑1 (MQ=34)
                                                                 gagaTTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTg           <  1:1570674/100‑1 (MQ=34)
                                                                 gagaTTCCCCCAGCAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGAGTTAGTGGAAGCCTCTGGAGAGGCGCGCGATACAGGGTg           <  1:4890235/100‑1 (MQ=11)
                                                                      tCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCCGTGTGTGCGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGc      >  1:3496247/1‑100 (MQ=16)
                                                                       cccccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGcc     >  2:3189893/1‑100 (MQ=34)
                                                                       cccccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGc      <  1:2994088/99‑1 (MQ=33)
                                                                        ccccAGTAGCGGCGAGCGAACGGGGAGGCGCCCCGAGCCCGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGccc    >  2:587632/1‑100 (MQ=255)
                                                                        ccccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGccc    >  1:1592613/1‑100 (MQ=34)
                                                                        ccccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGccc    >  1:1980677/1‑100 (MQ=34)
                                                                         cccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAg       <  2:492505/96‑1 (MQ=33)
                                                                         cccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGcccc   >  2:1402388/1‑100 (MQ=34)
                                                                          ccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATGCAGGGTGACAGcccc   >  1:1367588/1‑99 (MQ=21)
                                                                          ccAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCg  <  1:3379620/100‑1 (MQ=34)
                                                                          ccAGTAGCGGCGAGCGAACGGGGAGGAGCCCACAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGTCGCGCGATACAGGGTGACAGCCCCg  <  2:4559049/100‑1 (MQ=16)
                                                                           |                                                                                                  
ATAGGTTAATGAGGCGAACCGGGGGAACTGAAACATCTAAGTACCCCGAGGAAAAGAAATCAACCGAGATTCCCCCAGTAGCGGCGAGCGAACGGGGAGGAGCCCAGAGCCTGAATCAGTGTGTGTGTTAGTGGAAGCGTCTGGAAAGGCGCGCGATACAGGGTGACAGCCCCG  >  NC_000913_3_bme_pgi/225923‑226096

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.