Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913_3_bme_pgi | 1,950,292 | 0 | C | G | 20.4% | 404.8 / 106.4 | 178 | A77A (GCG→GCC) | aspS | aspartyl‑tRNA synthetase |
Reads supporting (aligned to +/- strand): ref base C (67/73); new base G (22/14); total (91/87) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.92e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.59e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 184 total aligned reads displayed.
CGGCAGAACATCTGCGCGGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTGCA > NC_000913_3_bme_pgi/1950196‑1950389 | cGGCAGAACATCTGCGCGGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCa < 1:767972/100‑1 (MQ=255) ggCAGAACATCTGCGCGGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCa < 2:1461365/99‑1 (MQ=255) gCAGAACATCTGCGCGGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑Cg < 1:4799393/100‑1 (MQ=255) aGAACATCTGCGCGGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTa < 1:5066653/100‑1 (MQ=255) gAACATCTGCGCGGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTAc > 1:3807122/1‑100 (MQ=255) aCATCTGCGCGGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACgg < 2:1718679/100‑1 (MQ=255) cATCTGCGCGGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGt > 1:1368095/1‑100 (MQ=255) cTGAGCGGTTGATGATAGTCAGCGAGGACGCCAGCTCTTCGATTACGCCGGTCGCCATATCGCGGCGAATA‑TTTTTTTCGCCACGCGCA‑CGTCCGGTgac > 2:4430605/1‑98 (MQ=255) cgcgGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGccc < 1:1863547/98‑1 (MQ=255) cgcgGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGccc < 2:1844894/98‑1 (MQ=255) cgcgGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGcc < 2:1502526/97‑1 (MQ=255) cgcgGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCg < 2:2662691/99‑1 (MQ=255) cgcgGTTGATGATAGTCAGCGAGGACGCCAGCACTGCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGt < 2:3595270/100‑1 (MQ=255) gcgGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGt > 2:3922894/1‑99 (MQ=255) gcgGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGt > 2:3743143/1‑99 (MQ=255) cgGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTg < 1:4278579/99‑1 (MQ=255) cgGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTg < 2:73124/99‑1 (MQ=255) cgGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGa < 1:1811756/100‑1 (MQ=255) ggTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGGGCACCGTAC‑GTGCGCGTGAc < 1:3751942/100‑1 (MQ=38) ggTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGGGCACCGTAC‑GTGCGCGTGAc < 1:1012636/100‑1 (MQ=38) gTTGATGATAGTCAGCGGGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGAcc < 2:4990087/100‑1 (MQ=255) gTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGAc < 2:4508574/99‑1 (MQ=255) gTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGATGCCCGTGAcc > 2:3406263/1‑100 (MQ=255) gTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTCAATA‑TTTTTTTCGTCACGGTCACCGTAC‑GTGCGCGTGAc < 1:4892189/99‑1 (MQ=255) ttGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGGGCACCGTAC‑GTGCGCGTGAcga < 1:3295370/100‑3 (MQ=37) tgatgaTAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCt > 2:1799604/1‑99 (MQ=255) gatgatAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTg > 1:1728073/1‑99 (MQ=255) gatgatAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGGCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGGGCACCGTAC‑GTGCGCGTGAcgaa < 1:4062898/99‑4 (MQ=37) atgatAGTCAGCGAGGGCGCCAGCACGTCGATTTCGCCGGGCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGGGCACCGTACGG‑GCGCGTGAcgaaaa < 2:2817349/100‑6 (MQ=25) atgatAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGGGCACCGTAC‑GTGCGCGTGAcgaaa < 1:374338/99‑5 (MQ=37) atgatAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGGGCACCGTAC‑GTGCGCGTGAcgaaa < 1:1547283/99‑5 (MQ=37) atgatAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTGTCGTCACGCGCA‑CGTACGGTGCCCGTGAc < 2:1502118/95‑1 (MQ=255) tgatAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAAt > 1:2133471/1‑100 (MQ=255) tgatAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAAt > 1:2404116/1‑100 (MQ=255) tgatAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAAt > 1:346290/1‑100 (MQ=255) atAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGc < 2:2577005/100‑1 (MQ=255) tAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCa < 1:4129102/100‑1 (MQ=255) tAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCa < 1:262410/100‑1 (MQ=255) gTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAg > 2:2309956/1‑99 (MQ=255) gTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAg > 1:1268785/1‑99 (MQ=255) gTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAg > 1:1526134/1‑99 (MQ=255) gTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAg > 1:4604269/1‑99 (MQ=255) gTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAg < 1:1654758/99‑1 (MQ=255) tCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGa < 1:2603663/99‑1 (MQ=255) aGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAAc < 1:3277551/99‑1 (MQ=255) cGAGGGCGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGGGCACCGTAC‑GTGCGCGTGAcgaaa < 2:4297280/88‑5 (MQ=21) cGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCa > 2:4764104/1‑100 (MQ=255) aGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACt > 2:3519413/1‑96 (MQ=255) ggACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCAt > 2:4799371/1‑98 (MQ=255) gCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCa < 1:3990142/100‑1 (MQ=255) ccAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAg > 2:1606319/1‑100 (MQ=255) aGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGtt > 1:3855710/1‑100 (MQ=255) aCTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCag < 2:3121772/100‑1 (MQ=255) cTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCa > 1:92403/1‑98 (MQ=255) cGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAgg < 1:3567126/99‑1 (MQ=255) cGATTTCGCCGGTCGCCATAACGCGGTTAATATTTTTTTTCGTCACGAGCA‑CGTAAGGTGCCCGTGACCTGAACGCAGGACTCATTACGCAGTTCACAgg > 2:3253560/1‑100 (MQ=255) tttCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAg < 1:3345076/100‑1 (MQ=255) tCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGc < 1:864868/99‑1 (MQ=255) gCCGGTCGCCATATCGCGGTTAATA‑TTTTTGTCGGCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCaga < 2:1439381/90‑1 (MQ=255) ccGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCttt > 1:439497/1‑99 (MQ=255) ccGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTa < 1:1251433/100‑1 (MQ=255) ggTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTaa > 1:4023620/1‑99 (MQ=255) gTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAAcg < 1:5000641/100‑1 (MQ=255) gTCGCCATATCGCGGTTAATA‑TTTTTTCCGTCACGCGCC‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAAcg > 1:4052050/1‑100 (MQ=255) gCCATATCGCGGTTAATA‑TTTTTTTTTTTTTTTTTC‑CGTACGGAGCCCGTGACCCGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTCACGCGt > 2:1145143/1‑100 (MQ=255) gCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAAcgcg < 1:1004543/99‑1 (MQ=255) gCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGAGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGt > 1:5276951/1‑100 (MQ=255) ccATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGt > 2:4607545/1‑99 (MQ=255) ccATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACCGTGCCCGTGACCTGAATGCAGAACTCATTACGCCGTTCAGAGGCCAGCCTTAACGCGtt > 2:3218259/1‑99 (MQ=255) cATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTcc > 1:3884936/1‑100 (MQ=255) cATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTcc > 1:2358096/1‑100 (MQ=255) tatCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCg < 2:1722966/99‑1 (MQ=255) tCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCAc < 2:414275/100‑1 (MQ=255) gcgGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGa > 1:5234157/1‑100 (MQ=255) gTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATcc > 1:4073840/1‑100 (MQ=255) ttAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCg > 2:533338/1‑100 (MQ=255) aaTA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGa > 2:832057/1‑100 (MQ=255) ta‑tTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATc < 1:4619548/100‑1 (MQ=255) tttttttCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCg < 1:1298831/99‑1 (MQ=255) tttttttCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCg < 1:2903591/99‑1 (MQ=255) ttttttCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCCGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGa > 2:2197299/1‑99 (MQ=255) ttttCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGGATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCg < 2:1087263/96‑1 (MQ=255) ttttCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGaaa > 1:4498798/1‑99 (MQ=255) ttttCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGaaa < 1:2068831/99‑1 (MQ=255) caggTCACGGGCACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGaaaaa > 1:655200/4‑99 (MQ=37) caggTCACGGGCACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGaaaaa > 2:683869/4‑99 (MQ=37) ggTCACGGGCACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATAc > 2:3856293/2‑100 (MQ=38) ggTCACGGGCACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATAc > 1:956099/2‑100 (MQ=38) ggTCACGGGCACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATAc > 1:1526381/2‑100 (MQ=38) ggTCACGGGCACCGTAC‑GTGCGCGTGACCTGAATCCAGCACTCACTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGCTCGAAAAATAc > 2:1896040/2‑100 (MQ=25) gTCACGGGCACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATAcc > 2:2254110/1‑100 (MQ=38) gTCACGGGCACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATAcc > 1:2667867/1‑100 (MQ=38) gTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATAcc > 1:3077202/1‑100 (MQ=255) tCACGGGCACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCt > 1:544844/1‑100 (MQ=38) cACGGGCACCGTAC‑GTGCGCGTGACCTGAATGCATAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTg > 1:5141943/1‑100 (MQ=255) cACGGGCACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTg > 1:3183533/1‑100 (MQ=255) cACGGGCACCGTAC‑GTGCGCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTg > 1:3914409/1‑100 (MQ=255) gcgcA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGGACGAGCCGGATc < 2:4196976/85‑1 (MQ=255) gcgcA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATAcc < 2:2829142/95‑1 (MQ=255) gcgcA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTGCa < 2:4696059/99‑1 (MQ=255) | CGGCAGAACATCTGCGCGGTTGATGATAGTCAGCGAGGACGCCAGCACTTCGATTTCGCCGGTCGCCATATCGCGGTTAATA‑TTTTTTTCGTCACGCGCA‑CGTACGGTGCCCGTGACCTGAATGCAGAACTCATTACGCAGTTCAGAGGCCAGCTTTAACGCGTCCGCACGATCCGGATCGAAAAATACCTGCA > NC_000913_3_bme_pgi/1950196‑1950389 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |