New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 697486	35 (0.790)	3 (0.070)	3/260	6.3	8.4%	intergenic (‑353/+27)	metT/asnB	tRNA‑Met/asparagine synthetase B
	?	NC_000913_3_bme_pgi	= 697492	34 (0.840)					intergenic (‑359/+21)	metT/asnB	tRNA‑Met/asparagine synthetase B
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

TTAACAATAGTGGTGGGAAATTAATCTATGAAATACTGGCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGGAAGAACAAGCGACGGAAGGACCGCCCGGCAC  >  NC_000913_3_bme_pgi/697347‑697635                                                                                                                                                  |                                                                                                                                                 ttAACAATAGTGGTGGGAAATTAATCTATGAAATACTGGCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAACCAGCCCCGGATTTCACCg                                                                                                                                               >  1:188404/1‑149 (MQ=255) ttAACAATAGTGGTGGGAAATTAATCTATGAAATACTGGCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCg                                                                                                                                               >  2:312170/1‑149 (MQ=255)                         tCTATGAAATACTGGCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTcttactta                                                                                                                       >  1:196621/1‑149 (MQ=255)                         tCTATGAAATACTGGCCTACAGTGATGAGTTGTCAAACAGTGATGTGACAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTcttactta                                                                                                                       >  2:497796/1‑149 (MQ=255)                                  cgccggCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAACCACCTCGATATCTGAAACCGCGTCAATGGTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGAc                                                                                                              <  1:183656/145‑1 (MQ=255)                                     tGGCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGGCTATGAGAATGAACAAGCACATAAATAACTTACACAGCACCGGATTACACCGGGGCTTTGCCGCATTTCTTACTTATACGCCGCCtag                                                                                                           >  2:183656/1‑147 (MQ=255)                                      ggCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTACTTACTTATCAGCCgcccgct                                                                                                          >  2:726786/1‑143 (MQ=255)                                       gCCTACAGTGATGAGTTGTCAAACAGTGATTTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCCTGGGAACTGCAACGCATTTCTTACTTATACGCCGACT‑GGTg                                                                                                        >  2:739060/1‑149 (MQ=255)                                               tgatgaGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAacatcta                                                                                                <  2:289561/149‑5 (MQ=255)                                               tgatgaGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCaa                                                                                                >  2:508154/1‑149 (MQ=255)                                                  tgaGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATAAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GTTGAACACCCACcg                                                                                             >  2:135476/1‑149 (MQ=255)                                                            aaCAATGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCCGa                                                                                   >  2:590555/1‑149 (MQ=255)                                                                  gATGTGGCCGACGCGGAACACGTCCGTGCTGGATTTCGGGATCAAGAAGCACCTCCATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCGTTTCTTACTGATCCGCCGACT‑GGTGAACACCAACCGCGCGAGCAGACGGATc                                                                             <  2:70334/149‑1 (MQ=255)                                                                    gtcggCCAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGt                                                                           <  2:256115/146‑1 (MQ=255)                                                                        gCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCAt                                                                       >  1:33440/1‑149 (MQ=255)                                                                          aaaCCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGAACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGCCCAGACGGCTCGGCCAttg                                                                     >  1:520861/1‑148 (MQ=255)                                                                            aCCCGGAACATTACCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGGGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTc                                                                   <  2:677055/149‑1 (MQ=255)                                                                              ccGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCtt                                                                 >  2:719753/1‑149 (MQ=255)                                                                              ccGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCtt                                                                 <  2:303145/149‑1 (MQ=255)                                                                              ccGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTGCTTACTCA‑ACAAATGCTGGGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCtt                                                                 <  1:183696/149‑1 (MQ=255)                                                                                        tCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCa                                                       <  1:719753/149‑1 (MQ=255)                                                                                         ccTTACTGCATATTTGAATCAACAGGCAACTCAATAGCTGAACCCGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGATAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTAAt                                                      <  2:760497/149‑1 (MQ=255)                                                                                                    atCAGAATCAACAAGCACGTCAAGAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGGCGACT‑GGTGAACACCAAACGCGCGACCAGACGGATCGTCCATTTTGTTGAACGCTTCATCCCATTCGATc                                           >  1:711419/1‑149 (MQ=255)                                                                                                         aaTCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAAAGCTTCATCCCATTCGATCGGttt                                      >  1:90333/1‑149 (MQ=255)                                                                                                               caaGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGga                                <  1:562358/149‑1 (MQ=255)                                                                                                                aaGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTGGCGgaa                               >  1:105370/1‑149 (MQ=255)                                                                                                                aaGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGgaa                               >  2:35690/1‑149 (MQ=255)                                                                                                                    aCCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGGAAGAAc                           <  1:504389/149‑1 (MQ=255)                                                                                                                    aCCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTCAATCCCATCCGATCGCTTCAGCgtacgcac                           >  2:762433/1‑142 (MQ=255)                                                                                                                     ccTCAATAACTGAAACAGCCCCGGATTTCACCGCGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGGAAGAACa                          <  1:165067/149‑1 (MQ=255)                                                                                                                           tAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGACCGCTTCAGCCCATGCGATCGCTTTAGCGGAAGAACAAGCgcc                    >  1:143748/1‑147 (MQ=255)                                                                                                                           tAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGGAAGAACAAGCGAc                    <  1:35690/149‑1 (MQ=255)                                                                                                                               tGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGGAAGAACAAGCGGCGGaa                >  1:50481/1‑149 (MQ=255)                                                                                                                                         ccGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑AATGAATATTAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGGAAGAACAAGCGACGGAAGGACCGCCCg      >  1:728903/1‑149 (MQ=255)                                                                                                                                             aTTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCTGATGCGATCGCTTTAGCGGAAGAACAAGCGACGGAAGGACCGCCCGgcac  >  1:564851/1‑149 (MQ=255)                                                                                                                                             aTTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGGAAGAACAAGCGACGGAAGGACCGCCCGgcac  <  1:312170/149‑1 (MQ=255)                                                                                                                                                  |                                                                                                                                                 TTAACAATAGTGGTGGGAAATTAATCTATGAAATACTGGCCTACAGTGATGAGTTGTCAAACAGTGATGTGGCAAACCCGGAACATTTCCTTACTGCATATCAGAATCAACAAGCACCTCAATAACTGAAACAGCCCCGGATTTCACCGGGGCTGTTTCGCATTTCTTACTTATACGCCGACT‑GGTGAACACCAACCGCGCGACCAGACGGATCGTCCATTTTCTTGAACGCTTCATCCCATTCGATCGCTTTAGCGGAAGAACAAGCGACGGAAGGACCGCCCGGCAC  >  NC_000913_3_bme_pgi/697347‑697635

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.