New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	2635831 =	32 (1.060)	3 (0.110)	3/262	4.2	9.2%	intergenic (‑17/+53)	yfgJ/der	DUF1407 family protein/GTPase; multicopy suppressor of ftsJ
	?	NC_000913_3_bme_pgi	2635863 =	30 (1.090)					intergenic (‑49/+21)	yfgJ/der	DUF1407 family protein/GTPase; multicopy suppressor of ftsJ
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CATTCCCTCTATGAATGTAGAGGGAATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_bme_pgi/2635860‑2635831 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagagggaatggcAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTCTTTGAACTGAATACGAATCGGCGATC  >  NC_000913_3_bme_pgi/2635863‑2636008                                                                                                                                                                                  CATTCCCTCTATGAATGTAGAGGGAATGGCAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGC                                                                                                         <  1:221167/73‑1 CATTCCCTCTATGAATGTAGAGGGAATGGCAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGC                                                                                                         >  2:221167/1‑73                cGTAGAGTGAATGGCAGATTACATACTTACGGATAATTATTTATTTTTCTCGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCTCATACGTGTTTTCCCCTTCTTTGAACTGAATAC              <  2:217575/148‑1                   AGAGGGAATGGCAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTCTTTGAACTGAATACGAA           >  1:304783/1‑149                      GGGAATGGCATATAAAATACTTACCGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTCTTTGAACTGAAGACGAATCG        <  1:231664/149‑1                            GGCAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATTTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTCTTTGAACTGAATACGAATCGGCGATC  <  1:109974/149‑1                                                                                                                                                                                  CATTCCCTCTATGAATGTAGAGGGAATGGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913_3_bme_pgi/2635860‑2635831 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tagagggaatggcAGATAAAATACTTACGGATAATTATTTATTTTTCTTGATGTGCTTCATCAGACGCTTACGTTTACGCATCTGGGTTGGCGTCAGGGTGTTACGCTTATTCGCATACGGGTTTTCCCCTTCTTTGAACTGAATACGAATCGGCGATC  >  NC_000913_3_bme_pgi/2635863‑2636008

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.