| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_bme_pgi | 1987843 = | 16 (0.530) | 4 (0.140) | 4/272 | 3.8 | 19.0% | intergenic (‑85/+30) | yecJ/azuC | DUF2766 family protein/acid‑inducible small membrane‑associated protein |
| ? | NC_000913_3_bme_pgi | 1987874 = | 19 (0.660) | coding (86/87 nt) | azuC | acid‑inducible small membrane‑associated protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
ATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGCCGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACC > NC_000913_3_bme_pgi/1987728‑1988021 | aTTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACCCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGCCGGAGCAGGTTTTTTGTTAt < 1:180128/149‑1 (MQ=255) aGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGCCGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTgg < 1:271581/149‑1 (MQ=255) gTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCGTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGCCGGCGCATTTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGaa < 2:358642/149‑1 (MQ=255) tCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACATCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGCCGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCtt > 2:167211/1‑149 (MQ=255) ttttGAAAGCCGTTATAGTAGCGACTGCACATCTTCAGCGATAGTCACATCCACCGTCATGAGGACACAAAAAAACCTGCCGGAGCAGGTCATTGCTTTTGGGGACTTATTGCTTGGCGGTACGTCTTTGAACGTCTGGCAATCGTGAt > 1:419965/1‑149 (MQ=255) aaaGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGCCGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAAc > 1:493709/1‑149 (MQ=255) ttATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGCCGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACATCTTGCAATATTTATTGAACATACttt > 2:475718/1‑149 (MQ=255) gCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGCCGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATcgc < 1:247244/149‑1 (MQ=255) caTCCACCGTCATCAGGACACAAAAAAACCTGCCGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGa < 2:479167/149‑1 (MQ=255) acccACCTTCATCAGGACACAAACAAACCTGCCGGCGCAGGTTTTTTGTTATCGCAACATATTGCCTGGCGGTACTTCTTTGAACTTCTTGCAATAGTTATTGAACATTCTTTTCAGTATTTTGCGCAGTTTCATCGCGGCACTCCGAc < 2:465574/147‑1 (MQ=255) aTCCACCGTCATCAGGACACAAAAAAACCTGCCGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAAAATACTTTTCAGGATTTTGCGCAGTTTCATCCCGGCCCCCCGAc > 2:126371/1‑149 (MQ=255) tcatcaGGACACAAAAAAACCTGCCGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATa > 2:97631/1‑88 (MQ=255) tcatcaGGACACAAAAAAACCTGCCGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATa < 1:97631/88‑1 (MQ=255) acacAAAAAAACCTGCCGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGCCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGgt > 2:298648/1‑149 (MQ=255) aaaaaaaCCTGCCGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTa > 1:154280/1‑149 (MQ=255) aaaaaaaCCTGCCGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACCTTTCAGGATTTTGCACAGTTTCATCGCGGCACTCCGACCATTTTTTATACAGGTGTTa > 2:456426/1‑149 (MQ=255) aaCCTGCCGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTGTGTGCTTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTc < 1:393753/149‑1 (MQ=255) aGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTACAGCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTta < 1:239037/149‑1 (MQ=255) gCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTtat < 2:39556/149‑1 (MQ=255) ttttttGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATAc < 2:426319/120‑1 (MQ=255) ttttttGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATAc > 1:426319/1‑120 (MQ=255) gTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAAc > 1:67749/1‑149 (MQ=255) ttATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAAcc > 2:350881/1‑149 (MQ=255) ttATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTACGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTGTAATATGACAAcc > 2:138829/1‑149 (MQ=255) | ATTCCTGATCGGCATTCAGCGGCTGGGACATCGTAAACTCCTGATAGCATTTTGAAAGCCGTTATAGTAGCGACTTCACATCTTCAGCGATAGTCACATCCACCGTCATCAGGACACAAAAAAACCTGCCGGAGCAGGTTTTTTGTTATCGGAACATATTGCCTGGCGGTACGTCTTTGAACGTCTTGCAATAGTTATTGAACATACTTTTCAGGATTTTGCGCAGTTTCATCGCGGCACTCCGACCATTTGTTATACAGGTGTTATTGTCTTTGCGCTTATAATATGACAACC > NC_000913_3_bme_pgi/1987728‑1988021 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |