New junction evidence | |||||||||||
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seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913_3_bme_pgi | = 872429 | 46 (0.990) | 3 (0.070) | 3/262 | NT | 6.3% | coding (540/912 nt) | gsiD | glutathione ABC transporter permease |
? | NC_000913_3_bme_pgi | = 872441 | 45 (1.000) | coding (552/912 nt) | gsiD | glutathione ABC transporter permease |
GGTGGGATCGGCTGATCATGCGCATTTGCGATGTGCTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGTTTTTCACCATGCGCA > NC_000913_3_bme_pgi/872284‑872577 | ggtggGATCGGCTGATCATGCGCATTTGCGATGTGCTGTTTGCATTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGc < 1:489976/149‑1 (MQ=255) gtggGATCGGCTGATCATGCGCATTTGCGATGTGCTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCACGT‑TTGCCCGcc > 2:240333/1‑149 (MQ=255) gCTGATCATGCGCATTTGCGATGTGCTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCg < 1:625944‑M2/149‑2 (MQ=255) cATGCGCATTTGGGATGTGTTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTCCCCGCCTGGTGCGCGGCAaca < 2:792476/149‑1 (MQ=255) cATGCGCATTTGCGATGTGCTGTTTGCCTTCCCGGGTATTTTACTGGCGAGCGCTTTTGTTGCGGTGTTGGGAAGCGGCAGTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAaca < 1:353724/149‑1 (MQ=255) gcACTTGCGGTGTGCTGTTTGCCTTCCGGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTTTTGCAGTCGCCATTTTTTCCAACCCCGCGTGTTGCCccgcaccaggcgggcaaacgcgg < 2:795697‑M1/149‑24 (MQ=255) aTTTGGGATGTGCTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGgt > 2:152372/1‑149 (MQ=255) tgCTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAg > 1:888900/1‑149 (MQ=255) cTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCgcccaccaggcgggcaaacgcggggacggaaaaaatgg > 2:438327‑M1/1‑111 (MQ=255) gctgcctgggTAGTTTTCTGGTGGTTGCTGTTGTTGCTGTGTTGGGAAGCGGCATTGCTAACGTTATTATTGCAGTCGCCATTTTTTCCATCACCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCttt < 2:63890/142‑1 (MQ=255) cTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTACCGTGATTATTGCAGTCGCCATTTATTCCATCACCGCGT‑TTACCCGCATGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAACCCTTTa > 1:18198/1‑149 (MQ=255) ttCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAac < 1:424435/120‑1 (MQ=255) ttCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAac > 2:424435/1‑120 (MQ=255) ttCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAAc < 2:261711/143‑1 (MQ=255) ttCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAAc > 1:261711/1‑143 (MQ=255) tgtcGGGTATTTTACTGGCGATCGCTTTTGTTGGGGTGTTTGGAAGCGGTATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTAtt < 2:575740/146‑1 (MQ=255) ccGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGa > 1:816351/1‑149 (MQ=255) gggTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGCGATTATTGCAGTCGCCATTTTTTCCATCCCCGCTT‑TTGCCCGCCTGTTGCCCGGCACCACGCTGGTTCTTAAACACCAAACCTTCCTTGaac > 1:656312/1‑147 (MQ=255) ttttACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCa > 1:461318/1‑149 (MQ=255) ttttACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCACGGAGACACTCGTTTGTTGAAACAGCAAACCTTTATTGAGTCAGCa > 1:468753/1‑149 (MQ=255) ttcctggCGATCGCTGTTGTTGCGGTGGTGGGAAGCGGAATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCAGCCCCGCGT‑TTGCCgcgcaccaggcgggcaaacgcggcgatgaaaaaaatggcgactgcaataatcacgttag < 1:438327‑M1/146‑60 (MQ=255) cTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAg > 1:315039/1‑149 (MQ=255) gCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTAt < 1:588407/149‑1 (MQ=255) gATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTg > 1:819362/1‑149 (MQ=255) ggggtgttgtGTCGGGGTTGGGGCGCGGAATTGGTAATGTGTTTATTGTAGTCGGCATTTTTGCCATCCCCGCGT‑TTGCCCGCCTGTGGCGCGGCAACACGGTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGTAGTATTGGt < 2:402319/145‑1 (MQ=255) gttgttGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTAGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAg > 1:842665/1‑149 (MQ=255) gttgCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTAGTGCCAGCGa < 2:686312/149‑1 (MQ=255) gCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGatat > 1:637392/1‑149 (MQ=255) ggTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGa > 1:612705/1‑149 (MQ=255) gtgtTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCTAGCGATATGAc < 2:479053/149‑1 (MQ=255) gtgagAAGCGGCATTGATAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCGCGCCTGCTGCGCGGCAACACGCGCGTGTTTAAACATCAAACCTTTATTGAGTCACCACGCAGTATTGATGCCATCGCTACTACCgc > 2:616597/5‑148 (MQ=255) aaGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGATGTTGAAACGGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATAACCGTTtagt > 1:431151/1‑149 (MQ=255) aGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTttgtt < 2:625944/149‑1 (MQ=255) ggtcATTGCTAAAGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGc < 1:398568/146‑1 (MQ=255) ggCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGCGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCg < 2:736937/149‑1 (MQ=255) gCATTGCTAACTTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGt < 1:682743/149‑1 (MQ=255) aTTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCa < 1:509517/149‑1 (MQ=255) cTAACGTGATTATTGCAGTCGCCATTTTTTTCATCGCCGCGT‑TTGCCCGCCTGGTGCGCggcaaacgcggggctggaaaaaatggcgactgcaataatcacgttagcaattccgcttcccaccaccgcaacaacagcgatcgccaggaa < 1:438327‑M2/149‑91 (MQ=255) cGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATcctgc < 1:152372/149‑1 (MQ=255) attattGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCTTGCCTgg > 2:234260/1‑149 (MQ=255) tattGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGTCTGGGa < 2:630871/149‑1 (MQ=255) tattGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGa < 2:888900/149‑1 (MQ=255) ttGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATAACCGTTTTGTTGCGTCATATCCTGCCTGGGAcc > 1:598136/1‑149 (MQ=255) tggTCGGCTTTTTTTCCTTCCCTGCTT‑TTGGCCGCCTGGTGCTCGGCAACACGCTGGTGTTGATACAGCAAACCTTTATTGAGTCTGCACGCAGTATTGGTGCCAGCGATATGTCCGTTTTGTTGCTTCATATCCTGCCTGGGACCGtc < 1:221425/147‑1 (MQ=255) tCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTctct > 1:45082/1‑149 (MQ=255) ccATTTTTTCCGTCCCCGCGT‑TTGCCCGCCTGGTGGGCggcaaacgcggggatggaaaaaatggcgactgcaataatcacgttagcaatgccgcttcccaacaccgcaacaacagcgatcgccagtaaaatacccgggaaggcaaacag > 2:438327‑M2/1‑38 (MQ=255) ttttttCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATc > 1:899254/1‑149 (MQ=255) tttttaCCACCCCCTGGT‑TTGCCCGCCTGGTGCGCGTCAACCCGCTGGTGTTGAAGCAGCAAACCTTTATTGAGTCAGCACGCATTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGTCTGGGACCGTCTCGTCTATc < 2:60192/149‑1 (MQ=255) tttCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGAAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCgtg < 1:20246/149‑1 (MQ=255) aTCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCCTCATATCCTCCCTGGGACCGTCTCTTCTATCGTGGCGtt > 2:876735/1‑149 (MQ=255) aTCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGATTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTCTCGTGGTGtt > 2:193453/1‑149 (MQ=255) cccGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGttttt > 1:42301/1‑149 (MQ=255) cccggcgttGTCCGCCTGGTGCGCGGCAAGACGTGTGTTTTGAACCAGCAAACCTTTATTGAGTCCGCATGCAGTATTGGTGCCAGCGATATGACCGCTTTGTTGCTTCTTATCCTGCCTTGGACCGTCTCTTCTATCGTGGTGttttt < 2:51504/142‑1 (MQ=255) ccGCGT‑TTGCCCGCCTGGTGCGGggcaacacgcggggttggaaaaaatggcgactgcaaaaatcacgttagcaatgccgcttcccaacaccgcaacaacagcgatcgccagtaaaataccccggaaggcaaacagcacaccgcaagtgc < 2:795697‑M2/149‑127 (MQ=255) ccGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGTTTTTc > 1:88221/1‑149 (MQ=255) t‑ttGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGTTTTTCACCAt > 1:352422/1‑149 (MQ=255) cccGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGCCCGTCTCTTCTATCGTGGTGTTTTTCACCATgcgc > 2:603739/1‑149 (MQ=255) cgcgcaccaggcgggcaaacgcggggatggaaaaaatggcgactgcaataatcacgttagcaatgccgcttcccaacaccgcaacaacagcgatcgccagtaaaatacccgggaaggcaaacagcacatcgcaaatgcgcatgatcagc < 1:625944‑M1/149‑149 (MQ=255) | GGTGGGATCGGCTGATCATGCGCATTTGCGATGTGCTGTTTGCCTTCCCGGGTATTTTACTGGCGATCGCTGTTGTTGCGGTGTTGGGAAGCGGCATTGCTAACGTGATTATTGCAGTCGCCATTTTTTCCATCCCCGCGT‑TTGCCCGCCTGGTGCGCGGCAACACGCTGGTGTTGAAACAGCAAACCTTTATTGAGTCAGCACGCAGTATTGGTGCCAGCGATATGACCGTTTTGTTGCGTCATATCCTGCCTGGGACCGTCTCTTCTATCGTGGTGTTTTTCACCATGCGCA > NC_000913_3_bme_pgi/872284‑872577 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |