New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	2095931 =	23 (0.490)	3 (0.070)	3/268	NT	9.4%	coding (88/777 nt)	hisF	imidazole glycerol phosphate synthase, catalytic subunit with HisH
	?	NC_000913_3_bme_pgi	2096003 =	35 (0.760)					coding (160/777 nt)	hisF	imidazole glycerol phosphate synthase, catalytic subunit with HisH

GCGGCGTAATAGTTGGTCGGGCATTACTGGAAGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGCGTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGA‑TATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGT  >  NC_000913_3_bme_pgi/2095783‑2096077                                                                                                                                                     |                                                                                                                                                    gcggcgTACTGGTTGGTCGGGCATTAGGGGAAGGGAAATTCCCCGTGAAGGGGGCCATCGCATGCTGGCAAAACGCATACGCCCCTGTCTCGACTTTCGTGATGGTCAGGTGGTGAAAGGCGTACAGTTTCGCAACCATGAAATCATTg                                                                                                                                                     <  2:789978/149‑1 (MQ=255)            gTTGGTCGGGCATTACTGGAAGGTAAATTGACCGTGAAGGAGGCCAGCTCATGGTGGCAAAACGCATAATCCCGTGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGCGTACAGTTTCGCAACCATGAAATCATGGGCGGTATCGTg                                                                                                                                          <  2:353413/149‑1 (MQ=255)               tccgcgccaaaggaaagaattttcgcggcatcttccagacacttaaccccacccaccacacaaaacggaatgtcgatcacttccgccacgcgagatacccagcttttatctaccacacggccatcgctggaagcGGCGATatcgtagac                                                                                                                                       <  1:306753‑M1/15‑5 (MQ=255)                                      aTTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCGCGACGTTCGTGAGGGTCAGGTGGTGAAAGGCGTACAGTTTGGAAACCCTGAGATCATTGGAGATATCGTTCTGCTGGCACAGCGCTTCCCTgacga                                                                                                                >  2:574882/1‑149 (MQ=255)                                            cGTGAAGGAGGACAGTGCATGGGGGCAAAACGCATAAGTCCGTGGCTCGATGGTCGTGATGGTCAGGTGGTGAAAGGCGTACAGTTTTGCAACCATGAAATCATTGGCGATATCGTGCCGATGGCAAAACGCTACGCTGAAGAAGgcgc                                                                                                          <  2:382000/149‑1 (MQ=255)                                            atcttccagagacttaatcccacctgccacacaaaacggaatgtcgatcacttccgccacgcgagatacccagcttttatctaccacacggccatcgctggaagcGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGgcgc                                                                                                          <  1:776884‑M1/44‑1 (MQ=255)                                             gTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGCGTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGCCGCt                                                                                                         >  2:649109/1‑149 (MQ=255)                                                   gaggCCATCGCATGCTGGAAAAACGCATAATACGATGTCGCGATGTTCGTGAGGGTCAGGTGGTGAAAGGCGTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGaa                                                                                                   <  2:398508/149‑1 (MQ=255)                                                      gCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGCGTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACACTGAAGAGGGCGCTCACGAACTg                                                                                                >  2:374323/1‑149 (MQ=255)                                                           cGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGCGTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGtt                                                                                           >  2:119713/1‑149 (MQ=255)                                                              atgagggCAAAACGCGTATTGCCTTGTCTCGGCGGTCGTGATGGTCGGGTGGTGAAAGGCGTACAGTTTCGCAACCATGAAATCATTGGCGGTATCGTGCCGCTGGCAAAACGCTACGCTGAAGATGGCGCTGACGAACTGGTGTTCTa                                                                                        <  2:446549/144‑1 (MQ=255)                                                               tggtGGCAAAACGCATAATTCCATGTCTCGACGTTCGGGATGGTCAGGTGGGGAAAGGCGTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTAc                                                                                       <  2:539987/146‑1 (MQ=255)                                                                               acggaatgtcgatcacttccgccacgcgagatacccagcttttatctaccacacggccatcgctggaagcGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGA‑TATCACCGCTTCCa                                                                      >  2:776884‑M1/71‑149 (MQ=255)                                                                                    gacgTCGCGACGTTCGTGATGGTCAGGTTGTGAAAGGCGTACTGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGA‑TATCACCGCTTCCAGCGAt                                                                 <  2:392851/146‑1 (MQ=255)                                                                                          tcGACGTTCGTGATGGTCAGGTGGTGGAAGGCGTACAGTTTCGCAACCATGAAAGCATTGGCGATATCGTGCCGCTGGCCAAACGCTACGCTGGAGAAGGCGCTGACGAACTGGTGTTACACGA‑TATCCCGGATTCCAGCGATGGCCgt                                                           >  1:295862/1‑149 (MQ=255)                                                                                                    tGATGGTCAGGTGGTGAAAGGCGTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAGACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGA‑TATCACCGCCTCCAGCACTGGCCGTGTgggctgta                                                 >  1:87494/1‑143 (MQ=255)                                                                                                    tGATGGTCAGGTGGTGAAAGGCGTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGA‑TGTCACCGCTTCCAGCGCTGGCCGTTTGGTCGATa                                                 >  1:441930/1‑149 (MQ=255)                                                                                                      aTGGTCAGGTGGTGAAAGGCGTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGA‑TATCACAGCTTCCAGTGATGCTCGTATGGTAGATaaa                                               >  1:470860/1‑149 (MQ=255)                                                                                                            aGGTGGTGAAAGGCGTAAAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGA‑TATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTgg                                         <  2:754470/149‑1 (MQ=255)                                                                                                                   gAAAGGCGTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGA‑TATCACCGCTTCCAGCGATGGCCGGGTGGTAGATAAAAGCCGGGTAtctc                                  >  1:820968/1‑149 (MQ=255)                                                                                                                          gTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGACAACCACCG‑TGCTATCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGc                           <  2:597409/149‑1 (MQ=255)                                                                                                                           tACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGA‑TATCACCGCTTCCCGCGATGGCCGTGTGGTAGATTAAAGCTGGGATTCTCGCATTGCg                          >  1:413847/1‑149 (MQ=255)                                                                                                                           gaccgTTTCGCAGCCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGA‑TATCACCGCTGCGAGGGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCg                          <  1:484925/145‑1 (MQ=255)                                                                                                                               gTTGCGGAAGCATGAAATCATGGGCGATATCGAGCCGCGGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGA‑TATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAg                      <  2:335945/149‑1 (MQ=255)                                                                                                                                  tCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGA‑TATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGa                   >  2:479185/1‑149 (MQ=255)                                                                                                                                    ggagcgaTGAAATGGTTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGA‑TATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATc                 <  1:649109/143‑1 (MQ=255)                                                                                                                                         cATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGA‑TATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCCCTCGTGGCGGCTATGATCTACAt            >  1:381431/1‑149 (MQ=255)                                                                                                                                                   ttGGCGATATCGTGCCACTGGCAAAACGCCACGCTGAAGAAGGCGGTGACGAACTTGTGTTCTACGA‑TATCACCGCTGCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTtgt  <  2:87494/149‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                    GCGGCGTAATAGTTGGTCGGGCATTACTGGAAGGTAAATTCACCGTGAAGGAGGCCATCGCATGCTGGCAAAACGCATAATCCCATGTCTCGACGTTCGTGATGGTCAGGTGGTGAAAGGCGTACAGTTTCGCAACCATGAAATCATTGGCGATATCGTGCCGCTGGCAAAACGCTACGCTGAAGAAGGCGCTGACGAACTGGTGTTCTACGA‑TATCACCGCTTCCAGCGATGGCCGTGTGGTAGATAAAAGCTGGGTATCTCGCGTGGCGGAAGTGATCGACATTCCGTTTTGT  >  NC_000913_3_bme_pgi/2095783‑2096077

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.