New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 2475050	49 (1.050)	4 (0.090)	4/268	NT	7.4%	coding (67/537 nt)	yfdR	CPS‑53 (KpLE1) prophage; conserved protein
	?	NC_000913_3_bme_pgi	= 2475065	52 (1.130)					coding (82/537 nt)	yfdR	CPS‑53 (KpLE1) prophage; conserved protein

TTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCGCCCAACATGCGGTGCTTTGCAGCCAGCTGGTGCCGCAGGAATTTGCTTTTGAAGCATTAATGCATGATGCAAC  >  NC_000913_3_bme_pgi/2474903‑2475198                                                                                                                                                    |                                                                                                                                                      ttAACTCAATAATCACAGGATGGTGAGGGATTCCTTTTACCCAAAATCAACGCGGTGCAGCGCATATACGTGGAGAACAAAACGTCATTTATTAAAACTTATTCCGGGAAGCATTTTTATTATGACAAGACAAAAAAAAGCGACATCGt                                                                                                                                                      >  2:815326/1‑149 (MQ=255)   aaCTGAATACTCTCCGTATGGAGAAGGCTTCCTTTGACCAAATCGCATCGCGGTCCAGCGCGTACACTGAGAGAACAAAATGTCATTTATTAAAACGTTTTCCGGCAAGCATTTTTATTATTTCAAGATAAATAAAGACGACATCGTgt                                                                                                                                                    <  2:682521/149‑2 (MQ=255)   aaCTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGa                                                                                                                                                    <  1:52835/149‑1 (MQ=255)      tCAATAATCACCGGATGGTAAGGGCTTCCTTTTAACAAAACTAAGCGCGGTACAGCGCATATACGTGGAAAACAAAATGTCAATTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACAACACAGTGAtca                                                                                                                                                 >  2:169173/1‑147 (MQ=255)       cAATAATCACCGGATTGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGTAGCGCATATACGTGGAGAACAAAAAGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTaa                                                                                                                                                <  1:232085/149‑1 (MQ=255)          tgatCACGGGATGGTGGGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATGAACGa                                                                                                                                             <  2:781220/147‑1 (MQ=255)                ccGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGCAGCATTTTTATTATGACAAGATAAATAAAGACAACACCGTGATAAACTATATCGc                                                                                                                                       <  1:200431‑M2/149‑2 (MQ=255)                     tGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGCCATCGTGATTAACGCTATCGCGGttt                                                                                                                                  >  2:659998/1‑149 (MQ=255)                       gTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTcc                                                                                                                                >  2:691687/1‑149 (MQ=255)                            gggttCCTTTTAACAAAACTTAGGGCGGTGAAGCGCATATTCGTGGAGAACAAAATGTCATTTATTAAAACTTTTGCCGTGAAGCATTTTTATTATGATAATATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCttag                                                                                                                           <  2:445625/146‑3 (MQ=255)                            ggCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAACTGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTc                                                                                                                           >  1:48090/1‑149 (MQ=255)                            ggCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTc                                                                                                                           <  1:808695/149‑1 (MQ=255)                               ttCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCaaa                                                                                                                        >  1:755840/1‑149 (MQ=255)                               ttCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCaaa                                                                                                                        <  1:691687/149‑1 (MQ=255)                                tCCTTTTACCCAAACTCAGCGCGGTGCAGCGCAGATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACAACATCGTGATTAACAATATCGCTGTTTCACTTTCAAat                                                                                                                       >  1:676572/1‑149 (MQ=255)                                   ttttACCCAAACTCAGATCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATc                                                                                                                    >  2:645762/1‑149 (MQ=255)                                        cccAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCg                                                                                                               <  1:545272/149‑1 (MQ=255)                                        cccAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCAGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACAATATCGCGGTTTCCCTTTCAAATATTTTCCg                                                                                                               >  2:659983/1‑149 (MQ=255)                                         ccAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGc                                                                                                              >  2:563275/1‑149 (MQ=255)                                         ccAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTCTTTCCGGGAAGCATTTTTATTATGACAAGATCAATAAAGACGACATCGTCAATAACGATATCGCGGTTTCCCACACAAATATCGGcagg                                                                                                              >  1:628560/1‑146 (MQ=255)                                           aaaCTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCtt                                                                                                            >  1:621736/1‑149 (MQ=255)                                              cTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGc                                                                                                         <  1:331597/149‑1 (MQ=255)                                               tCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGA‑‑‑‑‑‑‑gatatcgttaatcacgatgtcgtctttatttatcttgtcataataaaaa                                                                                                       <  1:614989‑M1/144‑50 (MQ=255)                                               tCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGA‑‑‑‑‑‑‑gatatcgttaatcacgatgtcgtctttatttatcttgtcataataaaaa                                                                                                       >  2:614989‑M1/1‑95 (MQ=255)                                                 aGCGCGGTTCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCTCCTTGCCgg                                                                                                      >  2:155113/1‑149 (MQ=255)                                                    gcgGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑Ca                                                                                                  <  2:127845/149‑1 (MQ=255)                                                         gtcgcgcATATACGTGGAGAACAAAATGGCATTTATTAAAACGGTTTCCGGGAAGCATTTTTCTTATGACAAGATAAATAAAGACGACATCGGGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCttt                                                                                             <  2:799875/146‑1 (MQ=255)                                                                atatACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCCGCCGCTTTGCCGGT‑CATCTTTCACACtt                                                                                      >  2:41450/1‑149 (MQ=255)                                                                     cGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAatat                                                                                                                     >  1:229859/1‑114 (MQ=255)                                                                     cGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAatat                                                                                                                     <  2:229859/114‑1 (MQ=255)                                                                      gTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAAACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGTC‑CATCTTTCTCACTTCTACAg                                                                                >  1:627544/1‑149 (MQ=255)                                                                         gagaACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAgtgt                                                                             <  1:899049/149‑1 (MQ=255)                                                                         gagaACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑AATCTTTTTCACTTCTACAttgt                                                                             >  1:528657/1‑149 (MQ=255)                                                                          agaACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTc                                                                            <  1:597842/149‑1 (MQ=255)                                                                            aaCAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCCGTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCGc                                                                          >  1:882370/1‑149 (MQ=255)                                                                                  aTGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCGCCCAACa                                                                    <  2:311066/149‑1 (MQ=255)                                                                                       aTTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACATCTACAGTGTCGCCCAACATGCgg                                                               >  1:527583/1‑149 (MQ=255)                                                                                        tttATTAAAACTTTTTCCGGGAAGCATTTTTATTATGCCAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCGCACTTCTACAGTGTTGCCCAACATGCGGt                                                              >  1:771916/1‑149 (MQ=255)                                                                                        tttATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGcgatatcgttaatcacgatgtcgt                                                                                                                               >  2:486314‑M1/1‑61 (MQ=255)                                                                                        tttATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGcgatatcgttaatcacgatgtcgt                                                                                                                               <  1:486314‑M1/85‑25 (MQ=255)                                                                                        tttATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCCAATGT‑TTCTTCTTTATCGGTAAATCTTTCTACCTTCCACGGTATCTCCCAACATGCGGt                                                              >  1:654611/1‑149 (MQ=255)                                                                                          tagtaAAACTTTTGACGGGAAGCATATTTAGTATGACAAGAGAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCGCCCAACATGCGGTGc                                                            <  2:476478/146‑1 (MQ=255)                                                                                            tactaaCTTTATCCGGCAAGCCTTCTGATTAGCACAACATAACGCAAGCCGACATCGTGCTTACCTATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCCTTCTCACTTCTACAGTTTCGCCCAACATGCGGTGCtt                                                          <  2:616890/145‑1 (MQ=255)                                                                                            gtaAATCTTTTTCCGGGATGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCGCCCAACATGCGGTGCtt                                                          <  1:458954/148‑1 (MQ=255)                                                                                              atagcgttttCCGGGAAGCATTTGTATTTTGAGAAGATAAATAAAGACGACATCGGGATTAACGATATCGCGGTTTCCCTTTCAAATTTCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCTCCCAACATGCGGTGCTTTg                                                        <  2:582162/143‑1 (MQ=255)                                                                                               aaaCTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACATAGTCGCCCAACATGCGGTGCTTGGc                                                       >  1:339668/1‑149 (MQ=255)                                                                                                aagtatttCCTGTAATCATTTTTATTATTATAAGATAAATAAAGACGACCTCGTGATTAACGATATCGCGGTTTTTTTTTCAAATCTCCGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTTTCTCCCAACATGCGGTGCTTTgta                                                      <  2:424410/144‑3 (MQ=255)                                                                                                aaCTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCGCCCAACATGCGGTGCTTTGca                                                      <  1:717558/149‑1 (MQ=255)                                                                                                               gCATTTTTATTATGACAAGATAAATAAAGACGACATCGTAATCAACCAAATCACGGTTTCCCTTTCAAATACCCGACGCTTTACCGGT‑CAACTTTCCCACTTCTACAGTGTCGCCCAACACGCCGGACTTTACAACCAGCTggcacccc                                       >  2:306697/1‑143 (MQ=255)                                                                                                                  tttttATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGtctttatttatcttgtcataataaaaatgcttcccggaaaaagttttaataaatgacattttgttctccacgtatatgcgctgcaccgcgctga                                          >  2:614989‑M2/1‑50 (MQ=255)                                                                                                                  tttttATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGtctttatttatcttgtcataataaaaatgcttcccggaaaaagttttaataaatgacattttgttctccacgtatatgcgctgcaccgcgctga                                          <  1:614989‑M2/144‑95 (MQ=255)                                                                                                                  tttttATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTACCGGT‑CATCTTTCTCACTTCTACAGTGTCGCCAAACATGCGGTGCTTTTCAGCCAGCTGGTGCCGCAgg                                    >  1:37971/1‑149 (MQ=255)                                                                                                                    tttATTATGACAAGATAAAGAAAGACGAGATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTTTCACTTCTACAGTGTCGCCCAACATGCGGTGCTTTGCAGCCAGCTGGTGCCGCAGGaa                                  <  2:40331/149‑1 (MQ=255)                                                                                                                        ttatGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCGCCCAACATGCGGTGCTTTGCAGCCAGCTGGTGCCGCAGGAATTTg                              >  2:215350/1‑149 (MQ=255)                                                                                                                           tGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCGCCCAACATGCGGTGCTTTGCAGCCAGCTGGTGCCGCAGGAATTTGCtt                           >  1:855355/1‑149 (MQ=255)                                                                                                                            gACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCGCCCAACATGCGGTGCTTTGCAGCCAGCTGGTGCCGCAGGAATTTGCttt                          <  2:510548/149‑1 (MQ=255)                                                                                                                                agttaaataaaGACGTCGTCGTGATTAACGATATCGCGGTTTCCCTTTCATATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCGCCCAACATGCGGTGCTTTGCAGCCAGCTGGTGCCGCAGGAATTTGCTTTTGaa                      <  1:414939/146‑1 (MQ=255)                                                                                                                                aGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCGCCCAACATGAGGTGCTTTGCAGCCAGCTGGTGCCGCAGGAATTTGCTTTTGaa                      >  1:532796/1‑149 (MQ=255)                                                                                                                                          aGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCGACCAACATGCTGTGCTTTGCAGCCAGCTGGTGCCGCAGGAATTTGCTTTTGAAGCATTAATGc            >  2:800066/1‑149 (MQ=255)                                                                                                                                            acgacATCGTGATTAACGATATCGcgatgtcgtctttatttatcttgtcataataaaaatgcttcccggaaaaagttttaataaa                                                                           >  2:486314‑M2/1‑24 (MQ=255)                                                                                                                                            acgacATCGTGATTAACGATATCGcgatgtcgtctttatttatcttgtcataataaaaatgcttcccggaaaaagttttaataaa                                                                           <  1:486314‑M2/85‑62 (MQ=255)                                                                                                                                              gacATCTAGTTTAACGAGTGCGTGGTTTCCTTTGTAAATATCTGCCGCTTTGCCTGT‑CATCTTGCTCACTTCTACAGTGGCGCACAACATGCGGTGTTTTGCAGCCAGCTGGTGCCGCAGGAATTTGCTTTTGAAGCATTAATGCatga        <  2:140388/149‑1 (MQ=255)                                                                                                                                                cATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCGTCCAACAGGCGGTGCTTTGCAGCCAGCTGGTGCCGCAGGAATTTGCTTTTGAAGCATTAATGCatgatg      <  1:249133/149‑1 (MQ=255)                                                                                                                                                  tCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCGCCCAACATGCGGTGCTTTGAAGCCACCTGGTACCGCAAGAATTTGCTTTTAAAGCATTAATGCataatgaa    >  1:187685/1‑147 (MQ=255)                                                                                                                                                    gcgatatagtttatcacggtgttgtctttatttatcttgtcataataaaaatgctgcccggaaaaagttttaataaatgacattttgttctccacgtatatgcgctgcaccgcgctgagtttgggtaaaaggaagccctcaccatccgg   <  1:200431‑M1/149‑149 (MQ=255)                                                                                                                                                    gTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACt                                                                                       <  2:507054/64‑1 (MQ=255)                                                                                                                                                    gTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACt                                                                                       >  1:507054/1‑64 (MQ=255)                                                                                                                                                    gTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCGCCCAACATGAGGTGCTTTGCAGCCAGCTGGTGCCGCAGGAATTTGCTTTTGAAGCATTAATGCATGATGCCAc  >  1:459030/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                      TTAACTCAATAATCACCGGATGGTGAGGGCTTCCTTTTACCCAAACTCAGCGCGGTGCAGCGCATATACGTGGAGAACAAAATGTCATTTATTAAAACTTTTTCCGGGAAGCATTTTTATTATGACAAGATAAATAAAGACGACATCGTGATTAACGATATCGCGGTTTCCCTTTCAAATATCTGCCGCTTTGCCGGT‑CATCTTTCTCACTTCTACAGTGTCGCCCAACATGCGGTGCTTTGCAGCCAGCTGGTGCCGCAGGAATTTGCTTTTGAAGCATTAATGCATGATGCAAC  >  NC_000913_3_bme_pgi/2474903‑2475198

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.