New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 2305071	NA (NA)	5 (0.190)	5/250	3.0	NA	noncoding (655/655 nt)	REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences	REP161 (repetitive extragenic palindromic) element; contains 12 REP sequences
	?	NC_000913_3_bme_pgi	= 2305100	NA (NA)					intergenic (+707/+8)	eco/mqo	ecotin, a serine protease inhibitor/malate dehydrogenase, FAD/NAD(P)‑binding domain
Rejected: Coverage evenness skew score above cutoff.

GGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGCTGCCTGCGGCTTGTCGTAGTTCAACCCCAGCACTTCGCTGGTGTACTGCAACTCGCGTTCTGTT  >  NC_000913_3_bme_pgi/2304952‑2305243                                                                                                                                                     |                                                                                                                                                ggCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTgg                                                                                                                                                 <  1:386763/149‑1 (MQ=255)                   gTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGcca                                                                                                                               >  1:175830/1‑147 (MQ=255)                       tCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATc                                                                                                                           >  1:20863/1‑149 (MQ=255)                             ccGTAGGTTGGTTAAGGCGGTTACGCGGCATCCAACATCTAACGCCCGGGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCAc                                                                                                                     <  2:137702/149‑1 (MQ=255)                             ccGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCAc                                                                                                                     >  2:240594/1‑149 (MQ=255)                                  ggTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCActtctt                                                                                                                <  1:425538/149‑1 (MQ=255)                                           aGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACgg                                                                                                       <  1:509992/149‑1 (MQ=255)                                            ggCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTCTCGTTACAACGCAATATACGCCACTTCTTTTTGCACtgg                                                                                                      >  2:118381/1‑149 (MQ=37)                                              cGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGtt                                                                                                    <  1:240594/149‑1 (MQ=255)                                              cGGTGACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACACCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGtt                                                                                                    <  1:149466/149‑1 (MQ=255)                                                gTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGc                                                                                                  <  1:117463/149‑1 (MQ=255)                                                                   cTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCg                                                                               <  2:494768/149‑1 (MQ=255)                                                                        ccccGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTCCAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTa                                                                          <  1:228677/148‑1 (MQ=255)                                                                          ccGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGTTTGCGGCTTCACCTGCCGTTTCCCCGTACt                                                                        >  2:252912/1‑149 (MQ=38)                                                                                  gTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATctgctg                                                                <  2:146039/149‑1 (MQ=255)                                                                                         gATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGCTGCCTGCgg                                                         <  2:120418/149‑1 (MQ=255)                                                                                              gACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGCTGCCTGCGGCTTGt                                                    <  2:412353/149‑1 (MQ=255)                                                                                                  cTGGCGCGTCTTATAAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGCTGCCTGCGGCTTGTCGTa                                                <  2:227830/149‑1 (MQ=255)                                                                                                     ccgtgTCTTATCAGCATACGCCCCCTCCGGCCTACCATCCCGGATGTGGCTTATCATTACAACGCAATATCCGCCACTTCTCTTTCAACGCGTTGCGGTTTCAACTGCGGTTTCCGCGTACTATCTGCTGCCTGCGGCTTGTCGTAGtt                                             <  1:88761/145‑1 (MQ=255)                                                                                                      cgcgTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACgg                                                                                                       >  1:397880/1‑90 (MQ=255)                                                                                                      cgcgTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACgg                                                                                                       <  2:397880/90‑1 (MQ=255)                                                                                                                  gCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACCCAATATCAGCCACTTCATTTTGAACGGGTTGCGTGTTCCACTGCGCTTTCGGCGTACTATCTGCTGCCTGCGCCTCGTCGTACTTCAACCACAGCACt                                >  2:148532/1‑149 (MQ=255)                                                                                                                        gCCACAACCAGAATACCACGACGGATGTGGCGTATCATTACAACGCAATCTCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGCTGCCTGCGGCTTGTCGTAGTTCAACCCCAGCACTTCGCTg                          <  1:118381/149‑1 (MQ=255)                                                                                                                         ccACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCTGCGTACTATCTGCTGCCTGCGGCTTGTCCTAGTTTAACCCCCGCCCTTCCCTgg                         >  1:50363/1‑149 (MQ=255)                                                                                                                          ttcaTCCGGCATACCATGCCGGATGGTGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGCTGCCTGCGGCTTGTCGTAGTTCAACCCCAGCACTTCGCTGgt                        <  2:318652/147‑1 (MQ=255)                                                                                                                          cacaTCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGCTGCCTGCGGCTTGTCGTAGTTCAACCCCAGCACTTCGCTGgt                        <  1:291406/149‑1 (MQ=255)                                                                                                                           aaaTCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATCTCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTCCGGTTTCGGCGTACTATCTGCTGCCTGCGGCTTGTCGTAGTTCAACCCCAGCACTTCGCTGgtg                       <  2:176997/147‑1 (MQ=255)                                                                                                                             aTCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTCCGGAAGACGATCTGCTGCCTGCGGCTTGTCGTAGTTCAACCCCAGCACTTCGCTGGTGTa                     >  1:516569/1‑149 (MQ=255)                                                                                                                                  gCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGCTGCCTGCGGCTTGTCGTAGTTCAACCCCAGCACTTCGCTGGTGTACTGCa                >  1:165320/1‑149 (MQ=255)                                                                                                                                   cATACTATGCCGGATGTGGCGCATCATTACAATGCGATATCCGCCACGTCTTTTTGAACGGGTTGCGTTGTCAACTGCGGTTTCGGCGTACGATCTGCGGCCTGCGGCTTGTCGTAGTTCAACCCCAGCACTTCGCTGGTGTACTGCaa               <  2:413219/149‑1 (MQ=255)                                                                                                                                   cATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGCTGCCTGCGGCTTGTCGTAGTTCAACCCCAGCACTTCGCTGGTGTACTGCaa               >  2:159897/1‑149 (MQ=255)                                                                                                                                      gccATGCCGGATGTGGCGTAGCATTACAACGCGATATCCGCGAGTTCTTTTTGAACGGGTTGCGGTTTCAAGTGGGGTTTTGGCGTACTATCTGCTGCCTGCGGCTTGTCGTAGTTCAACCCCAGCACTTCGCTGGTGTACTGCAACTc            <  2:47756/148‑1 (MQ=255)                                                                                                                                          tGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGCTGCCTGCGGCTTGTCGTAGTTCAACCCCAGCACTTCGCTGGTGTACTGCAACTCGCGt        <  1:338496/149‑1 (MQ=255)                                                                                                                                             cGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGCTGCCTGCGGCTTGTCGTAGTTCAACCCCAGCACTTCGCTGGTGTACTGCAACTCGCGTTCt     >  2:405881/1‑149 (MQ=255)                                                                                                                                                gtgtgGCCTATCATTACAACGCAATATCCGCCACTTCTTGTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGCTGCCTGCGGCTTGTCGTAGTTCAACCCCAGCACTTCGCTGGTGTACTGCAACTCGCGTTCTGtt  <  1:252912/148‑1 (MQ=255)                                                                                                                                                     |                                                                                                                                                GGCCTACACCGCTGTGAAGTGCTCCACCCCGTAGGTTGGATAAGGCGGTTACGCCGCATCCAACATCTAACGCCCGAGCCGGTTGCCTGATGCGACGCTGGCGCGTCTTATCAGCATACGCCACATCCGGCATACCATGCCGGATGTGGCGTATCATTACAACGCAATATCCGCCACTTCTTTTTGAACGGGTTGCGGTTTCAACTGCGGTTTCGGCGTACTATCTGCTGCCTGCGGCTTGTCGTAGTTCAACCCCAGCACTTCGCTGGTGTACTGCAACTCGCGTTCTGTT  >  NC_000913_3_bme_pgi/2304952‑2305243

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.