New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	3437896 =	18 (0.600)	4 (0.150)	4/262	3.6	20.8%	intergenic (+2/‑128)	trkA/mscL	NAD‑binding component of TrK potassium transporter/mechanosensitive channel protein, high conductance
	?	NC_000913_3_bme_pgi	3437924 =	14 (0.510)					intergenic (+30/‑100)	trkA/mscL	NAD‑binding component of TrK potassium transporter/mechanosensitive channel protein, high conductance
Rejected: Coverage evenness skew score above cutoff.

AATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCC‑TCA‑‑CAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAATGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAGAATTTCGCGAATTTGCGATGCGCGG  >  NC_000913_3_bme_pgi/3437784‑3438064                                                                                                                                                |                                                                                                                                             aaTGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCC‑TCA‑‑CAGATAAAAAGTTTATTACAGACGTCGAAAGACTCTTCAAGCAAAGCCCTTTCTTCTTGTAATTAATATGGAGTCGAATGACGCCTTATTGTTTACCttt                                                                                                                                      >  2:415214/1‑149 (MQ=255)           tGCGCATTGAGCAAGGCGATCCAGTAATGAGGTTCCTTCATCCAGCTATACAG‑‑‑AGTATCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAATGACGCCTTATTATTTCCCTTTGATTATCAAg                                                                                                                            <  1:514554/149‑1 (MQ=255)                            gATCACGTAATTATGTTCC‑TCA‑‑CAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAATGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAattcatt                                                                                                           <  1:162336/149‑1 (MQ=255)                                    aaTTATGTTCC‑TCA‑‑CAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTATTTAATAAGGCGTCTAATGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAg                                                                                                   >  2:480969/1‑149 (MQ=255)                                          gTTCC‑TCA‑‑CAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAATGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAAt                                                                                             <  1:451762/149‑1 (MQ=255)                                                      aGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAATGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACa                                                                                    >  1:359127/1‑149 (MQ=255)                                                           aaaaGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAATGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGt                                                                               >  2:241661/1‑149 (MQ=255)                                                             aaGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAATGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTa                                                                             <  2:359127/149‑1 (MQ=255)                                                                tttATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAATGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGAc                                                                          <  2:127417/149‑1 (MQ=255)                                                                               gAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAATGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTGGTTAGACGTATGGTTGTAGGCt                                                           >  1:397855/1‑149 (MQ=255)                                                                                        ttgcAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAATGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGga                                                  <  2:100931/146‑1 (MQ=255)                                                                                                                taattaatAAGGCGTCTAATGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAGa                          >  2:384190/1‑149 (MQ=255)                                                                                                                       taaGGCGTCTAATGACGCCTTATTATTTCCCTTGGATTATCAAGGATTAATTAAATTCATTTCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAGAATTTcgc                   <  1:12591/149‑1 (MQ=255)                                                                                                                         aGGCGTCTAATGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATAAGCCTTATTAAAGAATTTCGCGa                 >  1:203698/1‑149 (MQ=255)                                                                                                                                       gCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAGAATTTCGCGAATTTGCGATGcgcg   >  2:253169/1‑149 (MQ=255)                                                                                                                                        ccTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAGAATTTCGCGAATTTGCGATGCGAgg  <  2:92962/149‑1 (MQ=255)                                                                                                                                                |                                                                                                                                             AATGACAATCTGCGCATTGAGCAAGGCGATCACGTAATTATGTTCC‑TCA‑‑CAGATAAAAAGTTTATTACCGACGTCGAAAGACTCTTCCAGCCAAGCCCTTTCTTCTTGTAATTAATAAGGCGTCTAATGACGCCTTATTATTTCCCTTTGATTATCAAGGATTAATTAAATTCATTCCTGGCAGGAAAATGGCTTAACATTTGTTAGACTTATGGTTGTCGGCTTCATAGGGAGAATAACATGAGCATTATTAAAGAATTTCGCGAATTTGCGATGCGCGG  >  NC_000913_3_bme_pgi/3437784‑3438064

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.