New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 4385359	35 (0.880)	6 (0.160)	6/264	4.3	15.5%	intergenic (+17/‑35)	yjeM/yjeN	putative transporter/uncharacterized protein
	?	NC_000913_3_bme_pgi	= 4385364	33 (0.900)					intergenic (+22/‑30)	yjeM/yjeN	putative transporter/uncharacterized protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

ACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTCGATGCCT  >  NC_000913_3_bme_pgi/4385224‑4385508                                                                                                                                             |                                                                                                                                                 acggggACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGCTGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAACAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAg                                                                                                                                          <  1:388858/146‑1 (MQ=255)  cTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAgg                                                                                                                                         <  1:191995/149‑1 (MQ=255)     ggACAGCACATTGTGGAGGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCCATTTCCCTGAACCATAGCAGCAGAGTGGCCAAAAATCCGCAATGGGCGGTGGAATAACCCGATGCGCTATCGTCAACCTCACGAACGGGca                                                                                                                                      >  2:138029/1‑148 (MQ=255)       aCAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTa                                                                                                                                    <  1:549282/149‑1 (MQ=255)           cacaTTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCGCTATCGTCTACCTGACGATAGGGCGTAAAGa                                                                                                                                >  1:184966/1‑149 (MQ=255)           cacaTTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGa                                                                                                                                >  2:406888/1‑149 (MQ=255)                  cggATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGaaa                                                                                                                         >  2:347872/2‑149 (MQ=255)                     atgatTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGt                                                                                                                      <  1:367939/149‑1 (MQ=255)                          tGGCGGCCCTGTCTTCTTCTCGCTGTCAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGTTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATgg                                                                                                                 <  1:407757/149‑1 (MQ=255)                            gcggcCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATACGGCGGAAAGACAGGAAATGTTCTCGAt                                                                                                               >  1:666937/1‑149 (MQ=255)                               gcCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGac                                                                                                            >  1:685/1‑149 (MQ=255)                                       ttcttctCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCg                                                                                                    <  2:180460/149‑1 (MQ=255)                                        tcttctCGCTGTTGGCGATGGTGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCTGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATGGGGCGTAAAGACAGGCAATGTTGTGGGTGACAGCAGTCgt                                                                                                   >  2:256845/1‑148 (MQ=255)                                                      gCGATGGCGATTTAGCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGTTGACACCAGCCGGGACCCGGCAATAAc                                                                                     <  2:679259/149‑1 (MQ=255)                                                         aTGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGCAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGa                                                                                  >  2:412225/1‑149 (MQ=255)                                                           ggCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAg                                                                                <  2:685/149‑1 (MQ=255)                                                                     cAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAg                                                                      <  2:470786/149‑1 (MQ=255)                                                                      aGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGCCGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAgg                                                                     >  2:53301/1‑149 (MQ=255)                                                                          cgaTTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGgcgc                                                                 <  2:16612/147‑1 (MQ=255)                                                                                          gCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCgg                                                 >  2:31915/1‑149 (MQ=255)                                                                                            aaaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGGAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAGGATGAGATCAGGGCGCTGAAATTTTCTGCCggcg                                               >  2:103491/1‑147 (MQ=255)                                                                                             aaaaaTCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGGCAGCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGATGCAATATTCTGCCGGGGa                                              >  1:200021/1‑149 (MQ=255)                                                                                                            gCGGTGGAATAACCCGATGCGTTATGGTCTACGTGACGGTGGGGCGTAAAGACAGGAAATGTTATGGATGTCGCCAGCCGGGACGCGGCGATAACCGAAGATGAAATCAGGGCGCTGCCATTTTCTGTCGGGGATGTGGCGGAAAtcgg                               >  2:44689/1‑146 (MQ=255)                                                                                                             cGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAAACCGCGAGTAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATagag                              >  1:194165/1‑149 (MQ=255)                                                                                                              ggTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGc                             <  1:31915/149‑1 (MQ=255)                                                                                                               gTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGCTGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATaagaca                            >  1:617583/1‑144 (MQ=255)                                                                                                                  gAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGAc                         >  2:427493/1‑149 (MQ=255)                                                                                                                             tGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCtt              >  1:541125/1‑149 (MQ=255)                                                                                                                             tGCCCTATCCTCTATCTGACCTTAGTGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCTGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTATCGGAAATAGAGCAGACGATTCTCTCtt              <  2:217603/149‑1 (MQ=255)                                                                                                                               cccTCTCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCtttt            <  1:406888/149‑1 (MQ=255)                                                                                                                                  tATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTc         >  2:377055/1‑149 (MQ=255)                                                                                                                                    tCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTCGa       >  1:129907/1‑149 (MQ=255)                                                                                                                                     cGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTCGAt      <  2:450044/149‑1 (MQ=255)                                                                                                                                     cGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTCGAt      <  1:427493/149‑1 (MQ=255)                                                                                                                                       tCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTCGAtgc    <  2:580561/149‑1 (MQ=255)                                                                                                                                         tACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTCGAtgcct  <  1:53301/149‑1 (MQ=255)                                                                                                                                             |                                                                                                                                                 ACTGGGACAGCACATTGTGGATGATTGGCGGCCCTGTCTTCTTCTCGCTGTTAGCGATGGCGATTTACCAGAACTATTGCAGCAGAGTGGCAAAAAATCCGCAGTGGGCGGTGGAATAACCCGATGCCCTATCGTCTACCTGACGATAGGGCGTAAAGACAGGAAATGTTATGGATGACACCAGCCGGGACCCGGCAATAACCGAAGATGAAATCAGGGCGCTGCAATTTTCTGCCGGGGATGTAGCGGAAATAGAGCAGACGATTCTCTCTTTTGTCGATGCCT  >  NC_000913_3_bme_pgi/4385224‑4385508

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.