New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 4027405	63 (1.470)	6 (0.150)	5/270	5.2	9.1%	noncoding (84/281 nt)	REP291 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP291 (repetitive extragenic palindromic) element; contains 6 REP sequences
	?	NC_000913_3_bme_pgi	= 4027473	60 (1.480)					noncoding (152/281 nt)	REP291 (repetitive extragenic palindromic) element; contains 6 REP sequences	REP291 (repetitive extragenic palindromic) element; contains 6 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGC  >  NC_000913_3_bme_pgi/4027258‑4027549                                                                                                                                                    |                                                                                                                                                  ggAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCa                                                                                                                                                  >  2:293370/1‑149 (MQ=255)     gaaCGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTCCAAATAGTCCGAACCGTCGGCCGGATAAGGCGTTTCCGCCGCATCCGACAAATg                                                                                                                                              >  1:169848/1‑149 (MQ=25)     gaaCGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTg                                                                                                                                              <  1:671008/149‑1 (MQ=255)         ggCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGc                                                                                                                                          >  1:537686/1‑149 (MQ=255)           gaaCTAAGCTGTTTTTCAGTGGCAGTTAGATCTATGACGTATCTGGCAAACCAGGCCCGATGCGACGCTGTCGCGTCTTATCGGGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTAGGCCGCATCCGGCAATTGGTGCat                                                                                                                                        <  2:285154/148‑1 (MQ=18)           cacgtAAACTGTTTTCGAGTGGCATGTAGATCTATGACCTATCTGGTAAACCATGCCCGATGCGACGCTGCCGCGTCCTATCGTGCCTACAAATAGTCCCGACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCat                                                                                                                                        <  2:229012/145‑1 (MQ=17)                              tGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTg                                                                                                                     >  1:474258/1‑149 (MQ=255)                              tGGCATTTAGATCTATGACGTATATAGCAGACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTg                                                                                                                     >  1:738578/1‑149 (MQ=255)                               ggCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTgg                                                                                                                    >  2:382744/1‑148 (MQ=255)                                gCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACTCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGCCGCTGTc                                                                                                                   >  2:604367/1‑149 (MQ=255)                                        aTCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCTCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTa                                                                                                           >  1:658760/1‑149 (MQ=255)                                        aTCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTa                                                                                                           >  2:62730/1‑149 (MQ=255)                                           tATGACGTATCTGGCAAACCATGCCCGATGCGAAGCTGTCGCGTCTTATCGTGCCTACAGATAGTCCGAACCGTCGGCAGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCGGTTCAGAGCCTGTCGCGTCGTTTCg                                                                                                        >  1:356259/1‑149 (MQ=17)                                               aCGTATCTGGCAAACCCTGCCCGAAGCGACGCGGTCGCGTCTTCTCGCTGATACTAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGcc                                                                                                    <  1:545978/149‑1 (MQ=17)                                                       ggCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTGCAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTa                                                                                                  <  1:331174/143‑1 (MQ=255)                                                       ggCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTa                                                                                                  >  2:331174/1‑143 (MQ=255)                                                       ggCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATa                                                                                            <  1:744638/149‑1 (MQ=255)                                                        gCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAg                                                                                           <  1:670962/149‑1 (MQ=255)                                                         cAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGt                                                                                          <  1:291985/149‑1 (MQ=255)                                                          aaaCCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTc                                                                                         >  2:494537/1‑149 (MQ=255)                                                          aaaCCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGAATAAGGCTGTTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTc                                                                                         >  1:549107/1‑149 (MQ=17)                                                           aaCCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTcc                                                                                        <  1:496771/149‑1 (MQ=255)                                                            aCCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCg                                                                                       >  1:341769/1‑149 (MQ=255)                                                              cATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGAAGCTGTCGCGGCTTATCGTGCCTACAAATAGTCCGaa                                                                                     <  2:537686/149‑1 (MQ=255)                                                                tGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCCTCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTCTCGTGCCTACAAATAGCCCGGAc‑c                                                                                  >  2:191539/1‑149 (MQ=255)                                                                   ccGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTc                                                                                                              >  1:347194/1‑119 (MQ=35)                                                                        gCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCg                                                                          <  1:418152/149‑1 (MQ=255)                                                                         cGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTCGTGCAGGATGCCTGATGCGACGCTGTCGCCTCTTATCGTGCCTCCAAAGGCTCCGAACACGTAGTCCg                                                                          >  2:660828/1‑149 (MQ=14)                                                                           aCGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTCATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGAt                                                                       >  1:516196/1‑149 (MQ=255)                                                                               tGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCGTGCCAACAAAGAGTCCGACC‑CGTCGGCCCGATAAgg                                                                   >  2:270154/1‑149 (MQ=14)                                                                                   gcgTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGtt                                                               >  1:212045/1‑149 (MQ=255)                                                                                         tATCGTGCCTACAAATAGTCCGAACCGTAGGTCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTAcgcc                                                         <  2:622803/149‑1 (MQ=255)                                                                                                       aTAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTg                                           <  1:494537/149‑1 (MQ=255)                                                                                                         aGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGt                                         <  1:196509/149‑1 (MQ=255)                                                                                                         aGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGt                                         <  1:604072/149‑1 (MQ=255)                                                                                                           tCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGGAC‑CGTAGGCCGGGTAAGGCGTTTACGCCGCATCCGGCGATTGTTGc                                       >  1:475697/1‑149 (MQ=255)                                                                                                              gAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCatg                                    >  1:506899/1‑149 (MQ=255)                                                                                                              gAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCaga                                    >  2:206992/1‑147 (MQ=255)                                                                                                                   gTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGcc                               >  2:313196/1‑149 (MQ=255)                                                                                                                    tAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCt                              <  1:432085/149‑1 (MQ=255)                                                                                                                     aGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTg                             <  1:313196/149‑1 (MQ=255)                                                                                                                      ggCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGa                            >  2:513311/1‑149 (MQ=255)                                                                                                                       gCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGAt                           >  1:647537/1‑149 (MQ=255)                                                                                                                       gCCGGATAAGGCGTTTACGCCGCATCCCGAAAAAGGGGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACACATAGTCCGAAC‑CGTAGGCCGGGTAAGGCGGTTACGCCGCATCCGGCAATTAGTGCATGCTGCCTGAt                           >  1:738445/1‑149 (MQ=17)                                                                                                                        ccGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATg                          >  2:137195/1‑149 (MQ=255)                                                                                                                              aaGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGGCTATTGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGc                    <  1:581172/149‑1 (MQ=255)                                                                                                                                 gCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTCGCGCTCCCTATGTTTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGAAGCTgg                 >  1:362353/1‑149 (MQ=18)                                                                                                                                    tttACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGgcgc              <  2:425563/149‑1 (MQ=255)                                                                                                                                    tttACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTAAAAATAGTCCGAAC‑CGTAGGCCGGGTAAGCGGTTTAAGCCACATCCCGCCATTGGTGCATGAAGCCTGATGCGACGCTGgcgc              >  2:205/1‑149 (MQ=18)                                                                                                                                      tACGCCCTATGCCGCATTTGGTGAACCATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGt            <  2:474258/149‑1 (MQ=11)                                                                                                                                       aCGCCCCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTc           <  1:604367/149‑1 (MQ=255)                                                                                                                                         gccgcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCtt         >  1:391160/1‑149 (MQ=255)                                                                                                                                         gccgcATCCGGCAAGTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCtt         <  2:647537/149‑1 (MQ=255)                                                                                                                                          ccgcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTa        >  1:326826/1‑149 (MQ=255)                                                                                                                                          ccgcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTa        <  2:212045/149‑1 (MQ=255)                                                                                                                                          ccgcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTa        >  1:659609/1‑149 (MQ=255)                                                                                                                                          ccgcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAAGCGTTTCCGCCGCATCCCGCAATTGGGGCAAGATGCCTGGTGCGGCGCAGgcgccgcgag        >  2:712053/1‑143 (MQ=17)                                                                                                                                           cgcATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATAGTGCCAGATGCGACGCGGGCGCCCCTTac       >  2:402175/1‑148 (MQ=17)                                                                                                                                              aTCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAt                                             >  2:511247/1‑108 (MQ=255)                                                                                                                                              aTCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAAt                                             <  1:511247/108‑1 (MQ=255)                                                                                                                                                ccGGCAATTGGTGCATGACGCCTGATGCGACGCTGTCGCGTCTTATCGTGCATACACCGCTTCCTAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGc  <  1:174626/149‑1 (MQ=17)                                                                                                                                                   gCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTc                                                                                                              <  2:333400/39‑1 (MQ=255)                                                                                                                                                   gCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTc                                                                                                              >  1:333400/1‑39 (MQ=255)                                                                                                                                                    |                                                                                                                                                  GGAAGAACGGCAACTAAACTGTTATTCAGTGGCATTTAGATCTATGACGTATCTGGCAAACCATGCCCGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAACCGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGTCGCGTCTTATCGTGCCTACAAATAGTCCGAAC‑CGTAGGCCGGATAAGGCGTTTACGCCGCATCCGGCAATTGGTGCATGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGC  >  NC_000913_3_bme_pgi/4027258‑4027549

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.