Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
MC JC	NC_000913_3_bme_pgi	2,911,480	Δ12 bp	coding (2161‑2172/2235 nt)	relA ←	(p)ppGpp synthetase I/GTP pyrophosphokinase

Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NC_000913_3_bme_pgi	2911480	2911491	12	77 [0]	[0] 74	relA	(p)ppGpp synthetase I/GTP pyrophosphokinase

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	= 2911479	0 (0.000)	70 (1.230)	49/282	0.1	100%	coding (2173/2235 nt)	relA	(p)ppGpp synthetase I/GTP pyrophosphokinase
	?	NC_000913_3_bme_pgi	2911492 =	0 (0.000)					coding (2160/2235 nt)	relA	(p)ppGpp synthetase I/GTP pyrophosphokinase

TGTGGATCATAACCCTTTCCTCAAACCGCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACGCGCCCCAGCACTTGCAGGTTGTAAATCTCAATGGTCATGTCGATGGTCGCCAGTTGCTGTTTGGTGTCGCTACGGCTGGCAACGCCAAGCACGTTCACCTTCTCGTTGGCGAGAATGGTCGTGATATCACGTAACAACCCACTA  >  NC_000913_3_bme_pgi/2911330‑2911624                                                                                                                                                      |                                                                                                                                                  tgtgGATCATAACCCTTTCCTCAAACCGCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCAC                                                                                                                                                   >  2:503417‑M1/1‑150 (MQ=255) tgtgGATCATAACCCTTTCCTCAAACCGCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCAC                                                                                                                                                   >  2:289049‑M1/1‑150 (MQ=255) tgtgGATCATAACCCTGTCCTCAAACCGCTATCATATGGAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCGGGTTGAGTGTACCCAGCAC                                                                                                                                                   >  2:951643‑M1/1‑150 (MQ=255)    ggATCATAACCCTTTCCTCAAACCGCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttg                                                                                                                                                <  2:446046‑M1/150‑4 (MQ=255)    ggATCATAACCCTTTCCTCAAACCGCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTAGGCCTAACTCCCGTGCAACCGACGCGCCTCGATAACATCCGGCACCTGGTTGTGTTTACCCAGCACttg                                                                                                                                                >  1:879109‑M1/1‑147 (MQ=255)        cgtaaCCCTTTCCTCAAACCGCTATCATATGTAGATACAGTATATATCAATCTACAGTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGAAAACATCCGGAACCTGGTTTAGTTTACACAGCACttgcagg                                                                                                                                            >  2:531773‑M1/3‑143 (MQ=255)        cATAACCCTTTCCTCAAACCGCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACCTCCGGCACCTGGTTGAGTTTACCCAGCACttgcagg                                                                                                                                            >  2:149420‑M1/1‑143 (MQ=255)        cATAACCCTTTCCTCAAACCGCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcagg                                                                                                                                            >  2:475999‑M1/1‑143 (MQ=255)        cATAACCCTTTCCTCAAACCGCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcagg                                                                                                                                            >  2:755921‑M1/1‑143 (MQ=255)        cATAACCCTTTCCTCAAACCGCTATCATATGTAGATAAAGTATATATCAAACTACATTGTAGATACGATCAAATTTCGGACTAACTCACGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGTACttgcagg                                                                                                                                            <  1:724933‑M1/150‑8 (MQ=255)         aTAACCCTTTCCTCAAACCGCTATCATATGTAGATACAGTATATATCAATCTACATTATAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggt                                                                                                                                           <  2:631374‑M1/150‑9 (MQ=255)            aCCCTTTCCTCAAACCGCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgt                                                                                                                                        >  2:245114‑M1/1‑139 (MQ=255)              ccTTTCCTCAAACCGCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaa                                                                                                                                      <  1:379745‑M1/150‑14 (MQ=255)                   ccTCAAACCGCTATCATATGTAGATACTGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggtggtaaatctc                                                                                                                                 <  1:26729‑M1/150‑19 (MQ=255)                      cAAACCGCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCTTCGATAACATCCGGCACCGGGTGGAGGTTACCCCGCACgtgcagggtgtaaatctcact                                                                                                                              >  2:251318‑M1/1‑129 (MQ=255)                      cAAACCGCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGAAAATTTCGGCCTACCTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACATGGTTGAGTTAACCCAGCACttgcaggttgtaaatctcaat                                                                                                                              >  2:645950‑M1/1‑129 (MQ=255)                          ccGCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgcaaatctcaatggtc                                                                                                                          >  1:1735‑M1/1‑125 (MQ=255)                          ccGCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATAAGAGCAAATTTCGGCCTAACTCCCGTGCAACAGACGCGCGACGATAACATCCGGCCCCTGGTTGAGTTTACCCAGCCCttggaggttgttcatctcaatggtc                                                                                                                          >  2:656815‑M1/1‑125 (MQ=255)                           cGCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtca                                                                                                                         <  1:54828‑M1/150‑27 (MQ=255)                            gCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcat                                                                                                                        >  1:744386‑M1/1‑123 (MQ=255)                            gCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGAAGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcat                                                                                                                        >  1:563648‑M1/1‑123 (MQ=255)                             cTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAATTTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATATCATCCGGCAGCGGGTTGAGTTTACGCAGCACtggcaggttgtaattctcaatggtcatg                                                                                                                       >  2:553452‑M1/1‑122 (MQ=255)                                 cATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGTCCTAACTCCCTTGCAACCGACGCGCGTCGATAACATCCGGCACCTGATTGAGTTTACCCAGCACttgcaggtagtaaatcacaatggtcaggacga                                                                                                                   >  2:186526‑M1/1‑118 (MQ=255)                                   tatGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatg                                                                                                                 <  2:147274‑M1/150‑35 (MQ=255)                                         gATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgcc                                                                                                           <  1:684679‑M1/150‑41 (MQ=255)                                         gATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgcc                                                                                                           <  1:770313‑M1/150‑41 (MQ=255)                                           tACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATACGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaattctcaatggtcatgtcgatggtcgccag                                                                                                         >  1:235567‑M1/1‑108 (MQ=255)                                              aGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttg                                                                                                      <  2:253520‑M1/150‑46 (MQ=255)                                                 atatatCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGAGGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctg                                                                                                   <  1:951643‑M1/150‑49 (MQ=255)                                                 atatatCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctg                                                                                                   <  1:503417‑M1/150‑49 (MQ=255)                                                 ataaataaATCTACATTGTATATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGGCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgccg                                                                                                   <  2:533116‑M1/150‑49 (MQ=255)                                                          tcaacatTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtc                                                                                          >  1:397876‑M1/4‑93 (MQ=255)                                                          tCTACATTGTAGATACGAGCAAATATCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtc                                                                                          >  1:497063‑M1/1‑93 (MQ=255)                                                           cTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCCCttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcg                                                                                         >  2:690574‑M1/1‑92 (MQ=255)                                                           cTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgcaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcg                                                                                         <  2:1735‑M1/150‑59 (MQ=255)                                                             aaattGTAGATACTAGCAAATATCGGCCTATCTCCCGTGCTACCGACGCGAGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCTCttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgct                                                                                       <  1:889777‑M1/148‑61 (MQ=255)                                                             aCATCGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgct                                                                                       <  2:715820‑M1/150‑61 (MQ=255)                                                                    aGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctg                                                                                <  2:297691‑M1/150‑68 (MQ=255)                                                                    aGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctg                                                                                >  1:164590‑M1/1‑83 (MQ=255)                                                                       tACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGCCGCGAGTCGATAACATCCGGCACCTGTTTGAGTTTACCCAGCACttgcaggttgtaaatctcaagggtcatgtcgatggtcgccaggtgctggttggtgtcgctacggctggca                                                                             >  1:176113‑M1/1‑80 (MQ=255)                                                                       tACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggca                                                                             >  1:917028‑M1/1‑80 (MQ=255)                                                                       tACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggca                                                                             >  1:130746‑M1/1‑80 (MQ=255)                                                                             cAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgcca                                                                       >  2:642112‑M1/1‑74 (MQ=255)                                                                               aaTTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaag                                                                     >  1:878434‑M1/1‑72 (MQ=255)                                                                                      gCCTAACTCCCGTGCACCCGCCGCGCGTCGATAACATCACGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaactctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttc                                                              <  1:251318‑M1/150‑86 (MQ=255)                                                                                      gCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttc                                                              <  1:776148‑M1/150‑86 (MQ=255)                                                                                      gCCGAACTCCCGTGCAACCGACGCGCGTCGAGAACATCCGGCACCGGGTTGAGGTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttc                                                              <  1:645950‑M1/150‑86 (MQ=255)                                                                                       ccTAACTTCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaactctcaatggtcatgtcgctggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcc                                                             >  1:424862‑M1/1‑64 (MQ=255)                                                                                       ccTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttca                                                             <  1:245114‑M1/150‑87 (MQ=255)                                                                                         aaacGCCCGTGCAACCGACGCCCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcacc                                                           <  1:529265‑M1/149‑89 (MQ=255)                                                                                            cTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttaaccttg                                                        >  2:439006‑M1/1‑59 (MQ=255)                                                                                            cTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGGTGAGGTTACCCAGCACttgcagggtgtaaagctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttc                                                        <  1:209673‑M1/150‑92 (MQ=255)                                                                                               ccGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcg                                                     <  2:274704‑M1/150‑95 (MQ=255)                                                                                                    cAACCGACGCGCGTCGATATCATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgcctagcacgttcaccttctcgttggc                                                >  2:426047‑M1/1‑51 (MQ=255)                                                                                                    cAAACGACGAGCGTCGATAACATCCGGCACCTGGTTGAGTATACCCAGCACtttcaggttgtaaatctcaatggtcatgtcgatggtcgctagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcgttggc                                                <  1:531773‑M1/150‑100 (MQ=255)                                                                                                     aaCCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtgtggtgtcgcttcggctggcaacgccacgcacgttcaccttctcgttggcg                                               >  1:446966‑M1/1‑50 (MQ=255)                                                                                                       ccGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcgttggcgag                                             <  1:755921‑M1/150‑103 (MQ=255)                                                                                                       ccGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcgttggcgag                                             >  2:410102‑M1/1‑48 (MQ=255)                                                                                                       ccGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcgttggcgag                                             <  1:475999‑M1/150‑103 (MQ=255)                                                                                                       ccGACGCGCGTCGATAACAGCCGGCACCTGGTTGAGATTACCCAGCACttgcaggttgtaaatctcaatggtcatggcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcgttggcgag                                             <  1:149420‑M1/150‑103 (MQ=255)                                                                                                             cgcgTCGATAACATCCGGCCCCTGGTTGAGTTTACCCACCACttgcagggtgtaaatctcactgggcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcgttggcgagaatggt                                       <  2:559632‑M1/150‑109 (MQ=255)                                                                                                             cgcgTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcggtggcgagaatggt                                       >  1:342232‑M1/1‑42 (MQ=255)                                                                                                                  cGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcgttggcgagaatggtcgtga                                  <  1:289049‑M1/150‑114 (MQ=255)                                                                                                                          tCCGTCACCTGTTTGAGTTTACCCAGCTCttgcaggttgtaaatctcaatggtcatgtcgatggtcgcctgtttctgtttgttgtcgctacggctggcaacgccaagcacgtgcaccttctcgttggcgagaatggtcgtgatatcacgt                          <  2:397876‑M1/150‑122 (MQ=255)                                                                                                                          tCCGGCACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcgttggcgagaatggtcgtgatatcacgt                          <  2:497063‑M1/150‑122 (MQ=255)                                                                                                                            ctgccactggttgAGTTTACCCAGCACttgcaggttttaaatctcaatggtcatgtcgatggtcgccagttgctgtttggggtcgctacggctggcaacgccaagcacgttcaccttctcgttggcgagaatggtcgtgatatcacgtaa                        <  2:82667‑M1/144‑124 (MQ=255)                                                                                                                            cGGCACCTGGTTGAGTTTACCCATCACttgcaggttggaaatctcaatggtcatgtcgatgggcgccagttgctgtttggtggctctacggctggcaacgccaagcacgttcaccttctcgttggcgagaatggtcgtgatatcacgtaa                        <  1:416508‑M1/150‑124 (MQ=255)                                                                                                                               cACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttggtgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcgttggcgagaatggtcgtgatatcacgtaacaa                     >  2:411170‑M1/1‑24 (MQ=255)                                                                                                                               cACCTGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcgttggcgagaatggtcgtgatatcacgtaacaa                     <  1:855807‑M1/150‑127 (MQ=255)                                                                                                                                   tGGTTGAGTTTACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcgttggcgagaatggtcgtgatatcacgtaacaaccca                 >  1:186097‑M1/1‑20 (MQ=255)                                                                                                                                             tACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcgtaggcgagaatggtcgtgatatcacgtaacaacccactacgatcat       >  1:946177‑M1/1‑10 (MQ=255)                                                                                                                                             tACCCAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgacaagcactttcaccttctcgttggcgagaatggtcgtgatatcacgtaacaacccactacgatcat       >  1:638397‑M1/1‑10 (MQ=255)                                                                                                                                             tACCCAGCACttgcaggttgtaaatctcaatggtcatgacgatggtcgccagttgctgtttcgtgtcgctacgcctggcaacgccaagcacgatcaccttctcgttggcgagaatggtcgtgatatcacgtaacaacccactacgatcat       >  1:826510‑M1/1‑10 (MQ=255)                                                                                                                                               cccAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcgttggcgagaatggtcgtgatatcacgtaacaccccactacgatcatta     >  1:603368‑M1/1‑8 (MQ=255)                                                                                                                                                 cAGCACttgcaggttgtaaatctcaatggtcatgtcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcgttggcgagaatggtcgtgatatgacgtaacaacccactacgatcattagc   >  1:30106‑M1/1‑6 (MQ=255)                                                                                                                                                  aGCACttgcaggttgtaaatctcaatggtcctggcgatggtcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcgttggcgagaatggtcgtgatatcacgtaacaacccactacgatcattagct  <  2:563648‑M1/150‑146 (MQ=255)                                                                                                                                                  aGCACttgcaggttgtaaatctcaatggtcatgtcgatgggcgccagttgctgtttggtgtcgctacggctggcaacgccaagcacgttcaccttctcgttggagagaatggtcgtgatatcacgtaacaacccactacgatcattagct  <  2:744386‑M1/150‑146 (MQ=255)                                                                                                                                                      |                                                                                                                                                  TGTGGATCATAACCCTTTCCTCAAACCGCTATCATATGTAGATACAGTATATATCAATCTACATTGTAGATACGAGCAAATTTCGGCCTAACTCCCGTGCAACCGACGCGCGTCGATAACATCCGGCACCTGGTTGAGTTTACCCAGCACGCGCCCCAGCACTTGCAGGTTGTAAATCTCAATGGTCATGTCGATGGTCGCCAGTTGCTGTTTGGTGTCGCTACGGCTGGCAACGCCAAGCACGTTCACCTTCTCGTTGGCGAGAATGGTCGTGATATCACGTAACAACCCACTA  >  NC_000913_3_bme_pgi/2911330‑2911624

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑