New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_bme_pgi 3042440 =124 (1.650)6 (0.080) 5/270 10.5 5.3% noncoding (120/155 nt) REP210 (repetitive extragenic palindromic) element; contains 3 REP sequences REP210 (repetitive extragenic palindromic) element; contains 3 REP sequences
?NC_000913_3_bme_pgi 4027550 = 97 (1.360)noncoding (229/281 nt) REP291 (repetitive extragenic palindromic) element; contains 6 REP sequences REP291 (repetitive extragenic palindromic) element; contains 6 REP sequences
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 124 total aligned reads displayed.

TCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGTT  >  NC_000913_3_bme_pgi/3042295‑3042586
                                                                                                                                                 |                                                                                                                                                  
   ctTTATCGCATCAGCCATTTATCTTCTGATGCGACGCTGGCGTGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGAt                                                                                                                                              <  1:667940/149‑1 (MQ=255)
    tttATCGCATCAGGCGTTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGCTGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGCTAAGGCGTTCACGCCGAATCAGGCAGTTGTGCTCCGATGCCTAATg                                                                                                                                             >  1:643857/1‑149 (MQ=255)
    ttgattgCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATg                                                                                                                                             <  2:1128997/143‑1 (MQ=255)
     ttATCGTGTAAGGCAGTTATCGCGTGATTCGAGGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCATAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGc                                                                                                                                            <  2:423021/149‑1 (MQ=38)
     ttATCACATCAACCATTTATCCCCTAATACAACCCTAGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGc                                                                                                                                            <  1:483967/149‑1 (MQ=38)
        tCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTGAACCAGGCTGGGGGTGGACGCCTTTATCCCAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGAc                                                                                                                                         <  1:251245/149‑1 (MQ=37)
            aTCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCGGGCAGTTGTGCTCCAATGCCTGATGCGACGCTg                                                                                                                                     >  2:1319029/1‑149 (MQ=255)
                 gCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGcgcg                                                                                                                                >  2:1254001/1‑149 (MQ=255)
                 gCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGcgcg                                                                                                                                >  1:639293/1‑149 (MQ=255)
                  cATTTGTCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGt                                                                                                                               <  1:1215502/149‑1 (MQ=255)
                  cATTTATCGCCTGATGCGACGCTGGCGCGTCTTACCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCTATGCCTGATGCGACGCTGGCGCGt                                                                                                                               <  1:1146221/149‑1 (MQ=255)
                   aTTTATCGCCTGATGCGCCGCTGGCGCGTCTTATCATGGCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTc                                                                                                                              <  1:562618/149‑1 (MQ=255)
                          gCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAg                                                                                                                       <  1:347404/149‑1 (MQ=255)
                            cTGATGTGACGCGGGCGCGTCTTATCATGTCTGGGATGTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCAGGCAATTGTTCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGc                                                                                                                     <  1:50302/149‑1 (MQ=37)
                            cTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGCCGCTGGCGCGTCTTACCAGGc                                                                                                                     >  2:639894/1‑149 (MQ=255)
                             tGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGcc                                                                                                                    >  1:709363/1‑149 (MQ=255)
                                      gCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGt                                                                                                                               <  1:330827/129‑1 (MQ=255)
                                      gCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGt                                                                                                                               >  2:330827/1‑129 (MQ=255)
                                          gcgcGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGCCGCGTCTTATCGAGGCTACAAAGCGATAc                                                                                                       >  2:202064/1‑149 (MQ=37)
                                           cgcgTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCGGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATAcc                                                                                                      <  2:769771/149‑1 (MQ=255)
                                                cTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTAt                                                                                                                          <  1:791906/124‑1 (MQ=255)
                                                cTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTa                                                                                                 <  1:185606/149‑1 (MQ=255)
                                                 ttATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGCCATAccgcttat                                                                                                >  1:141736/1‑143 (MQ=255)
                                                    tCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGcc                                                                                             >  2:81120/1‑149 (MQ=255)
                                                     cATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGACCATAATGAGGTCTACAAAGGCATACCCATTACGCCt                                                                                            <  1:1313935/149‑1 (MQ=38)
                                                       tGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGCCGAATGGATAATGCGGTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTGCAAAGGCATACCCATTACGACTga                                                                                          >  2:1215557/1‑148 (MQ=37)
                                                        gTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGcc                                                                                         >  1:502049/1‑149 (MQ=255)
                                                         tCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGc                                                                                                                     <  2:526957/120‑1 (MQ=255)
                                                         tCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCAt                                                                                                         >  1:380109/1‑132 (MQ=255)
                                                         tCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCAt                                                                                                         <  2:380109/132‑1 (MQ=255)
                                                           tGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGGCGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCaa                                                                                      >  1:368202/1‑149 (MQ=255)
                                                            gggATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGACGCGTCTTATCAGGCCTACAAAGGCATACCCATTACACCTGCCCAat                                                                                     >  1:5769/1‑149 (MQ=255)
                                                               aTTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAAtata                                                                                  >  2:855295/1‑149 (MQ=255)
                                                               aTTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAAtata                                                                                  >  1:508238/1‑149 (MQ=255)
                                                                   gATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTg                                                                                                                                     >  1:796946/1‑94 (MQ=255)
                                                                   gATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTg                                                                                                                                     <  2:796946/94‑1 (MQ=255)
                                                                     tGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGTCCAATATACAAATa                                                                            <  1:139740/149‑1 (MQ=255)
                                                                      gCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAg                                                                           <  2:502049/149‑1 (MQ=255)
                                                                       ccTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCAAACCCATTACGCCTGCCCAATATACAAATAGa                                                                          >  1:583582/1‑149 (MQ=255)
                                                                        cTTTATCACAACAGGGCCGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGAt                                                                         <  2:954749/149‑1 (MQ=255)
                                                                        cTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGAt                                                                         <  2:742287/149‑1 (MQ=255)
                                                                        cTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGAt                                                                         >  1:681866/1‑149 (MQ=255)
                                                                         tttATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAg                                                                                                             <  1:168935/112‑1 (MQ=255)
                                                                         tttATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATc                                                                        <  1:1254001/149‑1 (MQ=255)
                                                                          ttATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTACTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTCCGCCTGCCCAACATCCAAAAAGATct                                                                       >  2:300040/1‑148 (MQ=37)
                                                                           taacacaACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATAACACGATTGATGTTCGGTTTATGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGc                                                                      <  2:615421/146‑1 (MQ=255)
                                                                            aTCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATCCAAATAGATCGcc                                                                     >  1:237244/1‑149 (MQ=255)
                                                                             tCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCCTTACGCCTGCCCAATATACAAATAGATCGCCa                                                                    >  1:516993/1‑149 (MQ=255)
                                                                             tCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCa                                                                    <  2:960898/149‑1 (MQ=255)
                                                                             tCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCa                                                                    >  1:744215/1‑149 (MQ=255)
                                                                             tCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCAGCATCCGGCAGGTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCa                                                                    <  1:639535/149‑1 (MQ=255)
                                                                                caaaaGGGACGAGGCCCGTAGATCGGATAAGGCGTTCAAGACGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGaa                                                                 >  1:199420/1‑149 (MQ=255)
                                                                                  acaGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAg                                                               <  2:193801/149‑1 (MQ=255)
                                                                                   caGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGAGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCCTTACGCCTGCCCAATATACAAATAGATAGCCAGAAAGt                                                              >  1:593171/1‑149 (MQ=255)
                                                                                     gggCCGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTgg                                                            <  1:86406/149‑1 (MQ=255)
                                                                                     gggACGAGGCCCGTAGTTGGGTTGGGGCGTGCACGCCGAATCCGTGAGTTGTGCCCCTTTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTgg                                                            <  2:547900/149‑1 (MQ=37)
                                                                                     gggACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCTTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTgg                                                            <  2:55317/149‑1 (MQ=255)
                                                                                       ggcGAGCCCCGTAGATCGGACAAGGCGTCCACGCCGAATCCGGCAGTTGTGCTCCGCTGACTGATGCGACGCCTGCGCGTTTTATAAGGCCTACAAAGGCATACCCACTACGCCTGCCCACTATACAAATAGATCGCCAGAAAGTGGca                                                          <  2:260695/147‑1 (MQ=255)
                                                                                       gACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACaaa                                                                                                              <  1:902242/97‑1 (MQ=255)
                                                                                       gACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACaaa                                                                                                              >  2:902242/1‑97 (MQ=255)
                                                                                       gACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGca                                                          <  2:1150203/149‑1 (MQ=255)
                                                                                        aCGAGGCCCGTAGATCGTATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGcac                                                         <  2:987253/149‑1 (MQ=255)
                                                                                          gAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATAGCCAGAAAGTGGcccac                                                       >  1:284948/1‑149 (MQ=255)
                                                                                           aGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGcacaca                                                      <  1:1206762/149‑1 (MQ=255)
                                                                                            ggCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCtt                                                                                                                            >  2:466872/1‑78 (MQ=255)
                                                                                            ggCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCtt                                                                                                                            <  1:466872/78‑1 (MQ=255)
                                                                                            ggCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATAc                                                                                 >  1:885511/1‑121 (MQ=255)
                                                                                            ggCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATAc                                                                                 <  2:885511/121‑1 (MQ=255)
                                                                                             gCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACt                                                    >  2:1182241/1‑149 (MQ=255)
                                                                                               ccGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGGGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACACAGGCATACCCATTACGCCTGCCTAATATACAAATAGATCGCCAGAAAGTGGCACACACTAc                                                  <  2:485707/149‑1 (MQ=255)
                                                                                                  tAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTCccga                                               >  2:1056839/1‑148 (MQ=255)
                                                                                                     aTCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGa                                            <  2:1186704/149‑1 (MQ=255)
                                                                                                     aTCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGa                                            >  2:159188/1‑149 (MQ=255)
                                                                                                     aTCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGa                                            <  1:855295/149‑1 (MQ=255)
                                                                                                      tCGGATAAGGCGTTCACGCCGAATCCGGCAGTGGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAg                                           <  1:72000/149‑1 (MQ=255)
                                                                                                            aaGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATCCATTTTGATCGTCAGAAAGTGGCACACACTACCGCCGAGCACGaa                                     <  2:1221425/149‑1 (MQ=37)
                                                                                                                 gTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGt                                <  2:508238/149‑1 (MQ=255)
                                                                                                                 gTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGt                                <  2:909413/149‑1 (MQ=255)
                                                                                                                 gTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCATACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCAAACACCAAGCCGt                                >  2:798251/1‑149 (MQ=255)
                                                                                                                 gTTCACGCCGAACCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGt                                <  1:113984/149‑1 (MQ=255)
                                                                                                                   tCACGCCGAGTCGGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGACTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGc                              <  1:1152809/149‑1 (MQ=255)
                                                                                                                   tCACGCCGAATCCGGCATGTGTGCTTCGATGCCTGATGCAGCGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATAGACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGc                              <  1:209291/149‑1 (MQ=39)
                                                                                                                     aCGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGc                                                           >  2:225346/1‑118 (MQ=255)
                                                                                                                     aCGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCa                            <  1:159188/149‑1 (MQ=255)
                                                                                                                       gCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGAt                                                                         >  2:723442/1‑102 (MQ=255)
                                                                                                                         cGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATg                        <  1:45330/149‑1 (MQ=255)
                                                                                                                         cGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTAATCCGCCTACTAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATg                        <  1:639894/149‑1 (MQ=39)
                                                                                                                          gAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATgg                       <  1:269054/149‑1 (MQ=255)
                                                                                                                            aTCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCa                     <  1:851437/149‑1 (MQ=255)
                                                                                                                             tCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACaaa                                                                              >  2:1260925/1‑91 (MQ=255)
                                                                                                                             cagggCATTTGTGCCACGATCCCTGATGCAACGCTGGCGACTTTTATCAGGCATACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCAt                    <  1:33954/146‑1 (MQ=255)
                                                                                                                              ccGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATg                   <  2:97109/149‑1 (MQ=255)
                                                                                                                               gggCAGTTGTTCTCCGATGGCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATgg                  <  1:727250/148‑1 (MQ=255)
                                                                                                                                 gCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGtt                <  1:1248238/149‑1 (MQ=255)
                                                                                                                                    gTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTa             <  2:844497/149‑1 (MQ=255)
                                                                                                                                          cTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAAt       <  2:744215/149‑1 (MQ=255)
                                                                                                                                             cGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTg                                                                                           <  2:1013372/62‑1 (MQ=255)
                                                                                                                                             cGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTg                                                                                           >  1:1013372/1‑62 (MQ=255)
                                                                                                                                               aTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGtt  <  1:468831/149‑1 (MQ=255)
                                                                                                                                               aTGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGtt  >  1:1014381/1‑149 (MQ=255)
                                                                                                                                                 |                                                                                                                                                  
TCTCTTTATCGCATCAGGCATTTATCGCCTGATGCGACGCTGGCGCGTCTTATCATGTCTGGGATTTGATGCCTTTATCACAACAGGGACGAGGCCCGTAGATCGGATAAGGCGTTCACGCCGAATCCGGCAGTTGTGCTCCGATGCCTGATGCGACGCTGGCGCGTCTTATCAGGCCTACAAAGGCATACCCATTACGCCTGCCCAATATACAAATAGATCGCCAGAAAGTGGCACACACTACCGCCGAGCACGAAGCCGTGCCAGATGGCATGGTTGTATGGAATGCGTT  >  NC_000913_3_bme_pgi/3042295‑3042586

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.