| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_bme_pgi | 231400 = | 69 (1.180) | 3 (0.050) | 3/280 | 7.7 | 4.7% | coding (279/801 nt) | yafD | endo/exonuclease/phosphatase family protein |
| ? | NC_000913_3_bme_pgi | 231470 = | 57 (1.030) | coding (349/801 nt) | yafD | endo/exonuclease/phosphatase family protein | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CAGGTAATGGATAGACCGTCACCAGTGCCGACTTCGCCAGACGCAAAATGGGTTCTCGTTCACGTAACGGGCAGCAATACACTGGATGTGCCGCCGAAAGGGTCATTACGCCAGAAGGATGTTGTGGCAGCACGAAAGCGGGTACCTGATCGGCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_bme_pgi/231557‑231400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcggcaCATCCAGTGTATTGCTGCCCGTTACGTGAACGAGAACCCATTTTGCGTCTGGCGAAGTCGGCACTGGTGACGGTCTATCCATTACCTGACACCCGCCTGTTGATGGTGGTTAATATACACGCCGTCAACTTCAGTCTGGGCGTGGAT > NC_000913_3_bme_pgi/231470‑231616 aAGGTAATGGATAGACCGTCACCAGTGCCGACTTCGCCAGACGCAAAATGGGTTCTCGTTCACGTAACGGGCAGCAATACACTGCATGTGCCGCCGAAAGGGTCATTACGCCAGAAGGATGTTGTGGCAGCACGAAAGCGGGTACCTGAT < 1:791502/149‑1CAGGTAATGGATAGACCGTCACCAGGGCCGACTTCGCCAGACGCAAATTGGGGTCTCGTTCACGTAACGGGCAGCAATACACTGGATGTGCCGCCGAAAGGGTCATTACGCCAGAAGGATGTTGTGGCAGCACGAAAGCGGGTACCTGAT < 1:269461/150‑1 AATGGATAGACCGTCACCAGTGCCGACTTCGCCAGACGCAAAATGGGTTCTCGTTCACGTAACGGGCAGCAATACACTGGATGTGCCGCCGAAAGGGTCATTACGCCAGAAGGATGTTGTGGCAGCACGAAAGCGGGTACCTGATCGGCG > 2:318204/1‑150 GGCAGCAATACACTGGATGTGCCGCCGAAAGGGTCATTACGCCAGAAGGATGTTGTGGCAGCACGAAAGCGGGTACCTGATCGGCGGCACATCCAGTGTATTGCTGCCCGTTACGTGAACGAGAACCCATTTTGCGTCTGGCGAAGTCGG > 1:938937/1‑150 TGTGCCGCCGAAAGGGTCATTACGCCAGAAGGATGTTGTGGCAGCACGAAAGCGGGTACCTGATCGGCGGCACATCCAGTGTATTGCTGCCCGTTACGTGAACGAGAACCCATTTTGCGTCTGGCGAAGTCGGCACTGGTGACGGTCTAT > 1:754393/1‑150 CGCCGAAAGGGTCATTACGCCAGAAGGATGTTGTGGCAGCACGAAAGCGGGTACCTGATCGGCGGCACATCCAGTGTATTGCTGCCCGTTACGTGAACGAGAACCCATTTTGCGTCTGGCGAAGTCGGCACTGGTGACGGTCTATCCATT < 2:938937/150‑1 CGGCGGCACATCCAGTGTATTGCTGCCCGTTACGTGCACGAGAACCCATATTGCGTCTGGCGAAGTCGGCACTGGTGACGGTCTATCCATTACCTGACACCCGCCTGTTGATGGTGGTTAATATACACGCCGGCAACTTCAGTCTGGGCG < 2:281816/150‑1 CGGCGGCACATCCAGTGTATTGCTGCCCGTTACGTGAACGAGACCCCATTTTGCGTCTGGCGAAGTCGGCACTGGTGACGGTCTATCCATTACCTGACACCCGCCTGTTGATGGTGGTTAATATACACGCCGTCAACTTCAGTCTGGGCG < 2:344231/150‑1 GGCGGCACATCCAGTGTATTGCTGCCCGTTACGTGAACGAGAACCCATTTTGCGTCTGGCGAAGTCGGCACTGGTGACGGTCTATCCATTACCTGACACCCGCCTGTTGATGGTGGTTAATATACACGCCGTCAACTTCAGTCTGGGCGT > 2:244732/1‑150 CGGCACATCCAGTGTATTGCTGCCCGTTACGTGAACGAGAACCCATTTTGCGTCTGGCGAAGTCGGCACTGGTGACGGTCTATCCATTACCTGACACCCGCCTGTTGATGGTGGTTAATATACACGCCGTCAACTTCAGTCTGAGCGTGG < 2:238616/150‑1 CGGCACATCCAGTGTATTGCTGCCCGTTACGTGAACGAGAACCCATTTTGCGGCTGGCGAAGTCGGCACTGGTGACGGTCTATCCATTACCTGACACCCGCCTGTTGATGGTGGTTAATATACACGCCGTCAACTTCAGTCTGAGCGTGG < 2:235354/150‑1 GCACATCCAGTGTATTGCTGCCCGTTACGTGAACGAGAACCCATTTTGCGTCTGGCGAAGTCGGCACTGGTGACGGTCTATCCATTACCTGACACCCGCCTGTTGATGGTGGTTAATATACACGCCGTCAACTTCAGTCTGGGCGTGGAT < 1:244732/150‑1 CAGGTAATGGATAGACCGTCACCAGTGCCGACTTCGCCAGACGCAAAATGGGTTCTCGTTCACGTAACGGGCAGCAATACACTGGATGTGCCGCCGAAAGGGTCATTACGCCAGAAGGATGTTGTGGCAGCACGAAAGCGGGTACCTGATCGGCGGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_bme_pgi/231557‑231400‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tcggcggcaCATCCAGTGTATTGCTGCCCGTTACGTGAACGAGAACCCATTTTGCGTCTGGCGAAGTCGGCACTGGTGACGGTCTATCCATTACCTGACACCCGCCTGTTGATGGTGGTTAATATACACGCCGTCAACTTCAGTCTGGGCGTGGAT > NC_000913_3_bme_pgi/231470‑231616 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |