New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_bme_pgi	137965 =	40 (0.880)	5 (0.110)	5/282	5.9	11.0%	coding (883/1551 nt)	cueO	multicopper oxidase (laccase)
	?	NC_000913_3_bme_pgi	137989 =	42 (0.950)					coding (907/1551 nt)	cueO	multicopper oxidase (laccase)
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

GTGATTGCCAGCGACGGTGGTCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCTTCGCTGGAAGGGCTGACGGTACGCAAGC  >  NC_000913_3_bme_pgi/137848‑138133                                                                                                                                              |                                                                                                                                                 gtgATTGCCAGCGACGGTGGTCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGCTAACAAACCCTTTGACATGGTGACGCTGCCGGTCAGCCAGATGGGGAt                                                                                                                                           >  2:786338/1‑149 (MQ=255)        ccAGCGACGGTGGTCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGAtt                                                                                                                                    >  2:778266/1‑149 (MQ=255)              aCGGTGGGCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTGTTGAAGGGCAGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTCAGGCTGCGGTGCAACCAAATGGGGATGGCGATTGCGCCg                                                                                                                              >  2:285272/1‑149 (MQ=255)                ggtggtCTGCTACCTGAACCAGGGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGtt                                                                                                                            <  1:802133/149‑1 (MQ=255)                    gtCTGCTACTGGAACCAGTGAAGGTGAGGGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGAt                                                                                                                        <  2:523487/149‑1 (MQ=255)                        gccaCCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGCAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGc                                                                                                                    <  1:6814/146‑1 (MQ=255)                                  ccAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAGCCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGt                                                                                                          >  1:728737/1‑149 (MQ=255)                                  ccAGTGAAGGTGAGCGAACTGCCGGTGCTGAGGGGCGAGCGTTTTGATGAGCTGGTGAAGGATAACGATAGCAAGCCCTTTGAGCTGGTGGCGATTCGCGGCACACAGAGGGGGGTGGCGGGTGCGCCGTTTGATACGACTCCTCCgga                                                                                                          >  2:45908/1‑148 (MQ=255)                                   cAGTGAAGGTCAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAGGCCTCATCCGGTa                                                                                                         >  1:781573/1‑149 (MQ=255)                                     gTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCgggact                                                                                                       >  2:303857/1‑145 (MQ=255)                                          ggTGAGCGAACTGCTGGTTTTGATGGGTGAGCGTTTTGAAGTGGTGGTGGAGGTTAACGATAACAAACCCTTTGACCGGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGa                                                                                                  <  1:22456/149‑1 (MQ=255)                                               gCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGAGAACAAACGCCGTGACGGGATGGAGCGTCCACGGAGCCGGAGAGGTCGGGCGTCGGCGCCTTTTTATAAGACACATCCGGTAATGCGGATACAg                                                                                             >  2:714239/1‑149 (MQ=255)                                                         ggTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTa                                                                                   >  1:124847/1‑149 (MQ=255)                                                            gcggATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTa                                                                                <  1:323883/146‑1 (MQ=255)                                                               gATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGa                                                                                                                                                  >  2:507550/1‑80 (MQ=255)                                                               gATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGa                                                                                                                                                  <  1:507550/80‑1 (MQ=255)                                                               gATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGGAGTGCGGGTTCAGCCGATTGCTATTAGTg                                                                             >  2:703649/1‑149 (MQ=255)                                                                    gCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTcc                                                                        >  1:597543/1‑149 (MQ=255)                                                                             ttGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCCTTTGATAACCCTCACCCGGTAATCCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTg                                                               <  2:272735/149‑1 (MQ=255)                                                                             ttGAAGTGCCGGGGGAGGTTAACGATAACAAACCCTTTGACCGGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTg                                                               <  2:782398/149‑1 (MQ=255)                                                                               gAAGTGCTGGTGGAGGTTAACGATAACAAACTCTTTGACCTGGTGACGCTGCCGGTCAGCCCGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGcc                                                             <  2:125882/149‑1 (MQ=255)                                                                                aaGCGCTGGGGGGGGTTAACGATAGCAAACCCTTTGACCTGGTGACGGTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTTATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCa                                                            <  2:117070/149‑1 (MQ=255)                                                                                    gCTGGTGGACGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGaca                                                        <  1:412577/149‑1 (MQ=255)                                                                                        gtggAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGcc                                                                                                                               >  1:485078/1‑74 (MQ=255)                                                                                        gtggAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGcc                                                                                                                               <  2:485078/74‑1 (MQ=255)                                                                                        gtggAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATCGCTATTAGTGCCTCCGGTGCTTTGCCAGACACAtt                                                    <  2:701697/149‑1 (MQ=255)                                                                                          gggggTTAACGATAGCTAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTaa                                                  <  1:102581/146‑1 (MQ=255)                                                                                                         cAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGGTGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGGTTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGt                                   >  1:231936/1‑149 (MQ=255)                                                                                                         cAAACCCTGTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGAGAAATTAAGGAGACTGCCTGCGt                                   >  2:630195/1‑149 (MQ=255)                                                                                                            aCCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTAc                                >  1:80879/1‑149 (MQ=255)                                                                                                             cgcTTTGACCTGGTGACGCTGCCGGTCAGCTAGATGGGGATGGCGATCGCGCCGTTTGAGAAGCCTCAGCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTAcc                               <  1:566890/147‑1 (MQ=255)                                                                                                              ccTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCt                              >  1:515452/1‑149 (MQ=255)                                                                                                                ctggACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTCCCTTGCCAGACACATTACCTCGCACCCCTGCGTTAccctt                            >  2:547237/4‑146 (MQ=255)                                                                                                                 ttGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCTTCg                           <  1:229266/149‑1 (MQ=255)                                                                                                                   gACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCTTCGCt                         <  2:189107/149‑1 (MQ=255)                                                                                                                        ggTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCTTCGCTGGAAg                    <  1:778266/149‑1 (MQ=255)                                                                                                                         gTGACGCTGCCGGTCAGCCAGATGGGGATGTCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCTTCGCTGGAAgg                   >  1:685094/1‑149 (MQ=255)                                                                                                                           gACGCTGCCGGTCAGCCAGATGGGGAGGGCGTTTGCGCCGGTTGAACAGACTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCTTCGCTGGAAGGGc                 <  1:506900/149‑1 (MQ=255)                                                                                                                               cTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCTTCGCTGGAAGGGCTGAc             <  1:616752/149‑1 (MQ=255)                                                                                                                                tGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCCACGGTGCGTTGCCACACACATTAAGTAAGCTGCATGCGTTTCCTTGGCTGGAAGGGCTGACg            >  2:221002/1‑149 (MQ=255)                                                                                                                                    ggTCAGCCAGATGGGGATGACGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGCCACATTAAGTAGCCTGCCTGCGTTACCTTCGCTGGAAGGGCTGCCGGTAc        >  2:69296/1‑149 (MQ=255)                                                                                                                                      tCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGGTACCTTCGCTGGAAGGGCTGACGGTACGc      >  1:136787/1‑149 (MQ=255)                                                                                                                                          ccAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCTTCGCTGGAAGGGCTGACGGTACGCAAGc  <  2:802593/149‑1 (MQ=255)                                                                                                                                          ccAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCAATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCTTCGCTGGAAGGGCTGACGGTACGCAAGc  >  1:762617/1‑149 (MQ=255)                                                                                                                                              |                                                                                                                                                 GTGATTGCCAGCGACGGTGGTCTGCTACCTGAACCAGTGAAGGTGAGCGAACTGCCGGTGCTGATGGGCGAGCGTTTTGAAGTGCTGGTGGAGGTTAACGATAACAAACCCTTTGACCTGGTGACGCTGCCGGTCAGCCAGATGGGGATGGCGATTGCGCCGTTTGATAAGCCTCATCCGGTAATGCGGATTCAGCCGATTGCTATTAGTGCCTCCGGTGCTTTGCCAGACACATTAAGTAGCCTGCCTGCGTTACCTTCGCTGGAAGGGCTGACGGTACGCAAGC  >  NC_000913_3_bme_pgi/137848‑138133

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.