New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 42357842071 (22.160)62 (0.720) 24/274 3.2 3.1% intergenic (‑2551/‑150) lysC/yjbE lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein
?NC_000913_3_hsa_pgi = 4235786 1905 (22.030)intergenic (‑2553/‑148) lysC/yjbE lysine‑sensitive aspartokinase 3/extracellular polysaccharide production threonine‑rich protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 2160 total aligned reads displayed.

CCCTTGTCTGTAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTA  >  NC_000913_3_hsa_pgi/4235638‑4235934
                                                                                                                                                    |                                                                                                                                                    
cccTTGTCTGTAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGa                                                                                                                                                      >  1:508352/1‑149 (MQ=255)
cccTTGTCTGTAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGATTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGa                                                                                                                                                      >  2:1377761/1‑149 (MQ=255)
 ccTTGTCTGTAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGaa                                                                                                                                                     >  1:619859/1‑149 (MQ=255)
  cTTGTCTGTAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGaaa                                                                                                                                                    <  2:753511/149‑1 (MQ=255)
  cTTGTCTGTAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGaaa                                                                                                                                                    <  2:29127/149‑1 (MQ=255)
  attGTGTGTAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATAAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGaaa                                                                                                                                                    <  2:1045011/148‑1 (MQ=255)
      tCTGTAATTTAACGTAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTta                                                                                                                                                <  1:752022/149‑1 (MQ=255)
      tCTGTAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTta                                                                                                                                                <  2:160629/149‑1 (MQ=255)
        tGTAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTTTTATTTAAATATAAGTTGAAACTtata                                                                                                                                              >  1:1001916/1‑149 (MQ=255)
        tGTAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATATGTTGAAACTtata                                                                                                                                              >  1:837907/1‑149 (MQ=255)
        tGTAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTtata                                                                                                                                              >  2:64742/1‑149 (MQ=255)
         tttaTTTAAAGGAATTCATACCGTTAGGTTAATCATAAATTTTATTTTTAATTTTTGTTTATTTCGGAAAATACTCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTatat                                                                                                                                             <  1:674781/146‑1 (MQ=255)
         gTAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTTCAACTTatat                                                                                                                                             <  2:407239/149‑1 (MQ=255)
         gTAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTatat                                                                                                                                             >  2:973574/1‑149 (MQ=255)
          tAATTTAACGGAAATCATACCGTGATGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCTGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATAtt                                                                                                                                            <  1:154436/149‑1 (MQ=255)
          tAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATTTAAGTTGAAACTTATAtt                                                                                                                                            >  2:888388/1‑149 (MQ=255)
          tAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATAtt                                                                                                                                            >  1:269833/1‑149 (MQ=255)
            aTTTAACGGAAATCATACCGTGATGTTAATACTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTg                                                                                                                                          <  1:236077/149‑1 (MQ=255)
                   ggAAATCATACCGTGAGGTTAATCCTAAAATTGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATattca                                                                                                                                   <  2:917960/149‑1 (MQ=255)
                   ggAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTTATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATattca                                                                                                                                   <  1:11374/149‑1 (MQ=255)
                   ggAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATATCGTAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATattca                                                                                                                                   <  2:1026000/149‑1 (MQ=255)
                    gAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATattcat                                                                                                                                  <  2:1297458/149‑1 (MQ=255)
                      aaTCATACCTTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATattcattc                                                                                                                                <  1:599018/149‑1 (MQ=255)
                      aaTCATACCGTGAGGTTATTCCTAAACTATATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATattcattc                                                                                                                                <  1:535803/149‑1 (MQ=255)
                      aaTCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATattcattc                                                                                                                                <  1:1316058/149‑1 (MQ=255)
                      aaTCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATattcattc                                                                                                                                <  1:469364/149‑1 (MQ=255)
                         cATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCaa                                                                                                                             <  1:1224106/149‑1 (MQ=255)
                         cATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCaa                                                                                                                             <  1:411447/149‑1 (MQ=255)
                          aTACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTATTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATACATTCCCAt                                                                                                                            >  2:838024/1‑149 (MQ=255)
                             ccGTGATTTTAATCCTAAAATAGATTTTTAATAGTTGTTTATTTCGGAAATTACTCAGATTAATTGCTTTTTTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTAt                                                                                                                         <  1:1025354/149‑1 (MQ=255)
                             ccGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTAt                                                                                                                         >  1:64210/1‑149 (MQ=255)
                              cGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATc                                                                                                                        <  1:1404713/149‑1 (MQ=255)
                               gTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATcc                                                                                                                       >  1:1438706/1‑149 (MQ=255)
                                    gTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTGTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTaaaa                                                                                                                  >  2:1441607/1‑149 (MQ=255)
                                       aaTCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGc                                                                                                               <  1:926092/149‑1 (MQ=255)
                                        aTCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCAAATTATCCTAAAACGca                                                                                                              >  1:774530/1‑148 (MQ=255)
                                         tCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCa                                                                                                             >  1:1112145/1‑149 (MQ=255)
                                         tCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCa                                                                                                             >  2:671299/1‑149 (MQ=255)
                                          ccTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCATAAAACGCCAt                                                                                                            >  2:946531/1‑149 (MQ=255)
                                           cTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACTCCATc                                                                                                           >  2:189742/1‑149 (MQ=255)
                                            tAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCg                                                                                                          >  2:624650/1‑149 (MQ=255)
                                            tAAAATAGATTTTTAATCCTTGTTTATTTCGGAAAATACGCATATTAATTGCTTTTGTATTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTAGAAAATTATATTTGATATTAATTCAAATAATCCTAAAAAGCCATCg                                                                                                          >  1:1373705/1‑149 (MQ=255)
                                                aTAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGACATCTCTaa                                                                                                      >  2:360279/1‑149 (MQ=255)
                                                   taTTTTTAATGGTTGTTTATTTCGGAAAATAAGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTc                                                                                                   <  2:1323817/148‑1 (MQ=255)
                                                   gATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTc                                                                                                   <  2:737162/149‑1 (MQ=255)
                                                    aTTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTcc                                                                                                  <  2:788978/149‑1 (MQ=255)
                                                     tttttAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTTTCATAAAACGACATCGCTAAttaaa                                                                                                 >  1:317781/1‑146 (MQ=255)
                                                       tttAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCcg                                                                                               >  2:247430/1‑149 (MQ=255)
                                                       tttAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCcg                                                                                               <  1:1465662/149‑1 (MQ=255)
                                                        ttAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCcgc                                                                                              >  1:119486/1‑149 (MQ=255)
                                                            tCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAAAGCCATCGCTAATTCCCCGCTcca                                                                                          >  1:560235/1‑148 (MQ=255)
                                                               ttgttTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTaa                                                                                       >  1:1296657/1‑149 (MQ=255)
                                                                 gttTATTTCGGAAAATACTCAGATTAATTGCTGTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAAtt                                                                                     <  2:115323/149‑1 (MQ=255)
                                                                  tttATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTc                                                                                    <  2:591999/149‑1 (MQ=255)
                                                                      tttCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCAt                                                                                <  1:946899/149‑1 (MQ=255)
                                                                           gAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCttt                                                                           >  2:527114/1‑149 (MQ=255)
                                                                             aaaTACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAg                                                                         <  2:315263/149‑1 (MQ=255)
                                                                              aaTACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTCGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGt                                                                        <  2:1510187/149‑1 (MQ=255)
                                                                              aaTACGAATATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGt                                                                        <  1:901383/149‑1 (MQ=255)
                                                                               aTACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGtt                                                                       <  2:811034/149‑1 (MQ=255)
                                                                                   gCAGATTAATTGCTTTTGTTTTTATTTTAATTTTATGATTTTTATTGATATTTAAATATAAGTAGAAACTTATATTTGATATTCATTCCAATTATACTAAAACGCAATCGCTAATTCCCATCTCAGTAATTAGAATGCTTTAGTTgtgt                                                                   >  1:295073/1‑149 (MQ=255)
                                                                                   gCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTgtgt                                                                   <  2:42521/149‑1 (MQ=255)
                                                                                   gCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTgtgt                                                                   <  2:1462580/149‑1 (MQ=255)
                                                                                   gCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGAATGCTTTAGTTgtgt                                                                   >  2:1124584/1‑149 (MQ=255)
                                                                                   gCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTACAATTATCCTAAAACGCCATAGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTtgtgg                                                                   >  2:109825/1‑148 (MQ=255)
                                                                                    aaGATTAATTGATTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTATAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGta                                                                  <  1:994331/148‑1 (MQ=255)
                                                                                       aTTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATAc                                                               >  2:50735/1‑149 (MQ=255)
                                                                                             tGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATc                                                         <  2:555735/149‑1 (MQ=255)
                                                                                              gCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATcc                                                        <  2:1421265/149‑1 (MQ=255)
                                                                                               cTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATccc                                                       >  2:384050/1‑149 (MQ=255)
                                                                                                ttttGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATcccg                                                      >  2:224339/1‑149 (MQ=255)
                                                                                                      ttttattttaAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATAGCTAATTACCCGCGCCGAAATTCTCATGCTTTAGTAATGTAAACTCGATCCCGCCCGaa                                                >  1:441744/1‑149 (MQ=255)
                                                                                                       tttattttaAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGaaa                                               <  2:861780/149‑1 (MQ=255)
                                                                                                           ttttaAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGtt                                           <  2:446007/149‑1 (MQ=255)
                                                                                                            tttaAGTTTATGATTTTTATTGTTATTTAAATATAAGTTTAAACTTATATTTTATATTCATTCCAATTATAATAAAACGCCATCGCTAATTCCCCGCGCCGAAATTCGCATGCTTTAGTTGTGTATAATCGATCCCGCCCGAAATGttt                                          >  2:1265078/1‑149 (MQ=255)
                                                                                                             ttaAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGtttt                                         <  1:1163759/149‑1 (MQ=255)
                                                                                                              taAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGttttt                                        <  1:973574/149‑1 (MQ=255)
                                                                                                              taAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCGTTAGTTGTGTATACTCGATCCCGCCCGAAATGttttt                                        <  2:1351054/149‑1 (MQ=255)
                                                                                                               aaGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTg                                       >  2:479726/1‑149 (MQ=255)
                                                                                                                aGTTTTTGATTTTTATTGTTATTTAAATATTAGTTGAAACTTATATTTGATATTCATTCGAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTGTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTgg                                      <  1:1269950/149‑1 (MQ=255)
                                                                                                                  tttATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGt                                    >  2:1227477/1‑149 (MQ=255)
                                                                                                                       gATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAAtc                               >  1:1344289/1‑149 (MQ=255)
                                                                                                                        aTTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATACTAAAAAGACATCGCTAATTAACAGCTCAGTAATTCTCATGCTTTAGTAGTGTATACTAGATCACGCCCTAAATGTTTTTGTGTAAAtct                              >  1:173098/1‑149 (MQ=255)
                                                                                                                             tATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCTCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCcatt                         <  1:80726/149‑1 (MQ=255)
                                                                                                                                  ttATTTAAATATTAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGATAATTCCCAGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCACGCCCGAAATGTTTTTGGGTAATACTCCattcattc                    >  1:1049541/1‑149 (MQ=255)
                                                                                                                                     tttAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAAt                 >  1:379035/1‑149 (MQ=255)
                                                                                                                                        aaaTATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGaa              <  2:1211462/149‑1 (MQ=255)
                                                                                                                                         aaTATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAg             <  1:71034/149‑1 (MQ=255)
                                                                                                                                            ataAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGa          >  2:1490196/1‑149 (MQ=255)
                                                                                                                                             taAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGaa         >  1:210351/1‑149 (MQ=255)
                                                                                                                                                 ttGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTg     >  2:338392/1‑149 (MQ=255)
                                                                                                                                                 ttGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTAGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTg     >  1:1496889/1‑149 (MQ=255)
                                                                                                                                                  tGAATCTTATATTTGATATTAATTCCAATTATGCTTATACGCAATCGATAATTCCCCGCGACGTATTTAGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGATATGTTTTTGGGTAAATGTCGATTCATTCAATGAAGGGAAATTGt    <  1:862049/149‑1 (MQ=255)
                                                                                                                                                   taaaCTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGtt   <  2:1078801/148‑1 (MQ=255)
                                                                                                                                                   gAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGtt   <  2:139655/149‑1 (MQ=255)
                                                                                                                                                   gAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGtt   <  2:1176762/149‑1 (MQ=255)
                                                                                                                                                    aaaCTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTa  <  2:269152/149‑1 (MQ=255)
                                                                                                                                                    aaaCTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTa  >  1:347772/1‑149 (MQ=255)
                                                                                                                                                    aaaCTTATATTTCATATGCATTCCAATTATCCTAAAACGCCAACGCTAATTCCGCGAGACGTAATTCGCATGCTTTTTTTGTGTATACTCGATCCCGCCCGAAATGTATTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTa  <  2:710114/149‑1 (MQ=255)
                                                                                                                                                    aaaCTAATATTAGATAATCATTCCAAATATCCTAAAACGCCATCGCTAATTACCCGCTCCGTAATTCGCATGATTTAGTTGTGAATACTCGATCCCGACCCAAAAGTTTTAGGTTAAATCTCCATTCATTCAATGAAGAGAAATTGATa  >  1:1086084/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CCCTTGTCTGTAATTTAACGGAAATCATACCGTGAGGTTAATCCTAAAATAGATTTTTAATCGTTGTTTATTTCGGAAAATACGCAGATTAATTGCTTTTGTTTTTATTTTAAGTTTATGATTTTTATTGTTATTTAAATATAAGTTGAAACTTATATTTGATATTCATTCCAATTATCCTAAAACGCCATCGCTAATTCCCCGCGCCGTAATTCGCATGCTTTAGTTGTGTATACTCGATCCCGCCCGAAATGTTTTTGGGTAAATCTCCATTCATTCAATGAAGGGAAATTGTTA  >  NC_000913_3_hsa_pgi/4235638‑4235934

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.