| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_pgi | = 3197242 | 98 (1.290) | 8 (0.110) | 7/282 | 7.8 | 7.9% | coding (2400/2841 nt) | glnE | fused deadenylyltransferase/adenylyltransferase for glutamine synthetase |
| ? | NC_000913_3_hsa_pgi | = 3197269 | 94 (1.300) | coding (2373/2841 nt) | glnE | fused deadenylyltransferase/adenylyltransferase for glutamine synthetase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_hsa_pgi/3197089‑3197242‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcgcgTGTAGTGTACGGCGATCCGCAGCTCACCGCGCACTTTGACGCAGTGCGTCGCGAGATTATGACGCTGCCGCGTGAAGGTAAAACTCTGCAAACGGAAGTGCGGGAAATGCGCGAGAAAATGCGCGCTCATCTCGGCAATAAACATCG < NC_000913_3_hsa_pgi/3197269‑3197123 TCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGCTGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGT < 2:87063/149‑1TCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGT < 1:736544/149‑1TCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGT < 2:347467/149‑1 CCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGC > 2:299758/1‑149 CTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGTGTAGTGTA > 1:776302/1‑149 TTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATATCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGTGTAGTGTACGGCGATCCGCAGCTCACCGCGCACT < 2:975354/149‑1 TATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGTGTAGTGTACGGCGATCCGCAGCTCACCGCGCACTT < 2:333542/149‑1 TATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGTGTAGTGTACGGCGATCCGCAGCTCACCGCGCACTT < 2:535327/149‑1 ATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGTGTAGTGTACGGCGATCCGCAGCTCACCGCGCACTTT < 1:658001/149‑1 TGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGTGTAGTGTACGGCGATCCGCAGCTCACCGCGCACTTTGA < 1:134508/149‑1 CCGAGTTGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCTTTTGCAGAGTTTTACCTTCACGCGGCAGAGTCATAATCTCTCGACGCACGGCGTCAAAGTGCGCGTGTAGGGTACGGCGAGCCGCAGCTCACCGCGCACTTTGACG < 1:225342/149‑1 GAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCGTGTAGTGTACGGCGATCCGCAGCTCACCGCGCACTTTGACGCA < 2:776302/149‑1 GTGCGCGTGTAGTGTACGGCGATCCGCAGCTCACCGCGCACTTTGACGCAGTGCGTCGCGAGATTATGACGCTGCCGCGTGAAGGTAAAACTCTGCAAACGGAAGTGCGGGAAATGCGCGAGAAAATGCGCGCTCATCTCGGCAATAAA > 2:686710/1‑149 CGTGTAGTGTACGGCGATCCGCAGCTCACCGCGCACTTTGACGCAGTGCGTCGCGAGATTATGACGCTGCCGCCTGAAGGTAAAACTCTCCAAACGGAACAGCGGGAAATGCGCGAGAAAATGAGCGATCATCTCGGCAATAAACATCG > 1:88107/1‑149 CGTGTAGTGTACGGCGAGCCGCAGCTCACCGCGCACTTTGACGCAGTGCGTCGCGAGATTATGACGCTGCCGCGTGAAGGTAAAACTCTGCAAACGGAAGTGCGGGAAATGCGCGAGAAAATGCGCGCTCATCTCGGCAATAAACATCG < 1:800695/149‑1 TCCCCCTTCATCAGCTTTGATATCAAAGCGATCGCGATGTTTATTGCCGAGATGAGCGCGCATTTTCTCGCGCATTTCCCGCACTTCCGTTTGCAGAGTTTTACCTTCACGCGGCAGCGTCATAATCTCGCGACGCACTGCGTCAAAGTGCGCG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913_3_hsa_pgi/3197089‑3197242‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gtgcgcgTGTAGTGTACGGCGATCCGCAGCTCACCGCGCACTTTGACGCAGTGCGTCGCGAGATTATGACGCTGCCGCGTGAAGGTAAAACTCTGCAAACGGAAGTGCGGGAAATGCGCGAGAAAATGCGCGCTCATCTCGGCAATAAACATCG < NC_000913_3_hsa_pgi/3197269‑3197123 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |