| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_pgi | 1120539 = | 93 (0.980) | 9 (0.100) | 9/282 | 8.3 | 9.5% | coding (48/1119 nt) | solA | N‑methyltryptophan oxidase, FAD‑binding |
| ? | NC_000913_3_hsa_pgi | 1120563 = | 83 (0.920) | coding (24/1119 nt) | solA | N‑methyltryptophan oxidase, FAD‑binding | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GACCATCCACCCAAAAGGCACCTCACCGGTGCCTTTACCATTTCTGGGTTGTATATCTGCATTCAGTTAATTACTCTGCTTAAACCATGAGAGCAGAGAGAAAAAAATGAAATACGATCTCATCATTATTGGCAGCGGTTCCGTAGGCGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_hsa_pgi/1120692‑1120539‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgccAATAATGATGAGATCGTATTTCATTTTTTTCTCTCTGCTCTCATGGTTTAAGCAGAGTAATTAACTGAATGCAGATATACAACCCAGAAATGGTAAAGGCACCGGTGAGGTGCCTTTTGGGTGGATGGTCATGTCATGTTAATGACG > NC_000913_3_hsa_pgi/1120563‑1120709 GACCGTCCACCCAAAAGGCACCTCACCGGTGCCTTTACCATTTCTGGGTAGTATATCTGCATTCAGATAATTACTCTCCTTAAACCATGAGAGCAGAGAGAAAAAAATGAACTACGAACTCATAATTATTGGCAGCGGTTCCGTAGGCG > 2:1481385/1‑149GACCATCCACCCAAAAGGCACCTCACCGGTGCCTTTACCATTTCTGGGTTGTATATCTGCATTCAGTTAATTACTCTGCTTAAACCATGAGAGCAGAGAGAAAAAAATGAAATACGATCTCATCATTATTGGCAGCGGTTCCGTAGGCG > 1:1486512/1‑149GACCATCCACCCAAAAGGCACCTCACCGGTGCCTTTACCATTTCTGGGTTGTATATCTGCATTCAGTTAATTACTCTGCTTAAACCATGAGAGCAGAGAGAAAAAAATGAAATACGATCTCATCATTATTGGCAGCGGTTCCGTAGGCG > 2:814264/1‑149 GCATTCAGTTAATTACTCTGCTTAAACCATGAGAGCAGAGAGAAAAAAATGAAATACGATCTCATCATTATTGGCAGCGGTTCCGTAGGCTCTGCCAATAATGATGAGATCGTATTTCATTTTTTTCTCTCGGCGCTCATGGTTTAAGC > 2:1350506/1‑149 AGAAAAAAATGAAATACGATCTCATCATTATTGGCAGCGGTTCCGTAGGCGCTGCCAATAATGATGAGATCGTATTTCATTTTTTTCTCTCTGCTCTCATGGTTTAAGCAGAGTTATTAACTGTATGCAGATATACAACCCAGAAATGG > 1:1134094/1‑149 AAAAATGAAATACGATCTCATCATTATTGGCAGCGGTTCCGTAGGCGCTGCCAATAATGATGAGATCGTATTTCATTTTTTTCTCTCTGCTCTCATGGTTTAAGCAGAGTAATTAACTGAATGCAGATATACAACCCAGAAATGGTAAA > 2:380684/1‑149 TCTCATCATTATTGGCAGCGGTTCCGTAGGCGCTGCCAATAATGATGAGATCGTATTTCATTTTTTTCTCTCTGCTCTCATGGTTTAAGCAGAGTAATTATCGGAATGCAGATATACAACCCAGAAATGGTAAAGGCACCGGTGAGGTG > 1:1405368/1‑149 TTATTGGCAGCGGTTCCGTAGGCGCTGGCAATAATGATGAGATCGTATTTCATTTTTTTCTCTCTGCTCTCATGGTTTAAGCAGAGTAATTAACTGATTGCAGATATACAACCCAGAAATGGTAAAGGCACCGGTGAGGTGCCTTTTGG > 1:909248/1‑149 TATTGGCAGCGGTTCCGTAGGCGCTGCCAATAATGATGAGATCGTATTTCATTTTTTTCTCTCTGCTCTCATGGTTTAAGCAGAGTAATTAACTGAATGCAGATATACAACCCAGAAATGGTAAAGGCACCGGTGAGGTGCCTTTTGGG > 2:1207943/1‑149 TTGGCAGCGGTTCCGTAGGCGCTGCCAATAATGATGAGATCGTATTTCATTTTTTTCTCTCTGCTCTCATGGTTTAAGCAGAGTAATTAACTGAATGAAGATATACAACCCAGAAATGGTAAAGGCACCGGTGAGGTGCCTTATGGGTG > 1:462421/1‑149 TGGCAGCGGTTCCGTAGGCGCTGCCAATAATGATGAGATCGTATTTCATTTTTTTCTCTCTGCTCTCATGGTTTAAGCAGAGTAATTAACTGAATGCAGATATACAACCCAGAAATGGTAAAGGCACCGGTGAGGTGCCTTTTGGGTGG > 2:1355147/1‑149 GCAGCGGTTCCGTAGGCGCTGCCAATAATGATGAGATCGTATTTAATTTTTTTCTCTCTGCTCTCATGGTTTAAGCAGAGTAATTAACTGAATGCAGATATACAACCCAGAAATGGTAAAGGCACAGGTGAGGTGCATTTTGGGTGGAT > 1:704592/1‑149 TGCCAATAATGATGAGATCGTATTTCTTTTTTTTCTCTCTGCTCTCATGGTTTAAGAACAGTAATTAACTTAATGCAGATATACAACCAAGAAATGGTAAAGGCACCGGTGAGGTGCCTTTTGGGTGGATGGTCATGTCATGTTAATGA < 2:416025/149‑1 GCCAATAATGATGAGATCGTATTTCATTTTTTTCTCTCTGCTCTCATGGTTTAAGCAGAGTAATTAACTGAATGCAGATATACAACCCAGAAATGGTAAAGGCACCGGTGAGGTGCCTTTTGGGTGGATGGTCATGTCATGTTAATGAC > 2:1400063/1‑149 GCCAATAATGATGAGATCGTATTTCATTTTTTTCTCTCTGCTCTCATGGTTTAAGCAGAGTAATTAACTGAATGCAGATATACAACCCAGAAATGGTAAAGGCACCGGTGAGGTGCCTTTTGGGTGGATGGTCATGTCATGTTAATGAC < 2:1477894/149‑1 CCAATAATGATGAGATCGTATTTCATTTTTTTCTCTCTGCTCTCATGGTTTAAGCAGAGTAATTAACTGAATGCAGATATACAACCCAGAAATGGTAAAGGCACCGGTGAGGTGCCTTTTGGGTGGATGGTCATGTCATGTTAATGACG > 2:1142355/1‑149 CCAATAATGATGAGATCGTATTTCATTTTTTTCTCTCTGCTCTCATGGTTTAAGCAGAGTAATTAACTGAATGCAGATATACAACCCAGAAATGGTAAAGGCACCGGTGAGGTGCCTTTTGGGTGGATGGTCATGTCATGTTAATGACG > 1:1497157/1‑149 GACCATCCACCCAAAAGGCACCTCACCGGTGCCTTTACCATTTCTGGGTTGTATATCTGCATTCAGTTAATTACTCTGCTTAAACCATGAGAGCAGAGAGAAAAAAATGAAATACGATCTCATCATTATTGGCAGCGGTTCCGTAGGCGCTGCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913_3_hsa_pgi/1120692‑1120539‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cgctgccAATAATGATGAGATCGTATTTCATTTTTTTCTCTCTGCTCTCATGGTTTAAGCAGAGTAATTAACTGAATGCAGATATACAACCCAGAAATGGTAAAGGCACCGGTGAGGTGCCTTTTGGGTGGATGGTCATGTCATGTTAATGACG > NC_000913_3_hsa_pgi/1120563‑1120709 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |