New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_pgi	= 258675	NA (NA)	38 (0.380)	32/296	3.4	37.2%	intergenic (+776/‑1)	crl/crl	pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers/pseudogene, sigma factor‑binding protein, RNA polymerase holoenzyme formation stimulator;regulator; Surface structures; transcriptional regulator of cryptic csgA gene for curli surface fibers
	?	NC_000913_3_hsa_pgi	314984 =	64 (0.630)					pseudogene (628/872 nt)	eaeH	pseudogene, attaching and effacing protein homology;factor; Not classified
Rejected: Coverage evenness skew score above cutoff.

CGTACTCAGTCAAATATTGGTTTTGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGATGTATGA  >  NC_000913_3_hsa_pgi/314837‑315132                                                                                                                                                    |                                                                                                                                                     cGTACTCAGTCAAATATTGGTTTTGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACt                                                                                                                                                     <  2:688/149‑1 (MQ=255)            aaaTATTGGTTTTGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATg                                                                                                                                          >  2:878479/1‑149 (MQ=255)            aaaTATTGGTTTTGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATATATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTTACTGAAACTGAGAGCCAATg                                                                                                                                          >  2:1443479/1‑149 (MQ=255)             aaTATTGGGTTTGGCTGGGGTGATTATTCATGAAATGACTGGATGGCGGGCGTGAATACTTTTATCGATCATGTTTTTTCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATgg                                                                                                                                         <  1:979585/149‑1 (MQ=255)              atatTGGTTTTGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGccggtaat                                                                                                                                        <  1:1331909/149‑7 (MQ=255)                 ttGGTTTTGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATACCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCTCGATTATCTGAAACTGAGCGCCAATGTTtat                                                                                                                                     >  1:721718/1‑149 (MQ=255)                   ggTTTTGGCTGGCGTCATTTTTCAGGAAATGTCTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTatat                                                                                                                                   <  1:244988/149‑1 (MQ=255)                     ttttGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTc                                                                                                                                 >  2:257921/1‑149 (MQ=255)                            tggcGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTc                                                                                                                          >  2:1622114/1‑149 (MQ=255)                            tggcGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACACGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTc                                                                                                                          >  1:1278666/1‑149 (MQ=255)                                ggcATTTTTCAGGAAATCACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGGCATACCCGCATTGGGGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTctggc                                                                                                                      <  2:270766/147‑1 (MQ=255)                                   aTTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTctggctgg                                                                                                                   >  1:1276881/1‑149 (MQ=255)                                           ggAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATc                                                                                                           >  2:1004001/1‑149 (MQ=255)                                                        tGGCGGCTGTGAATACTTTTATCGAACATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGGGCGGAATACTGGCGCGATTATCTGACACTGAGCGCCAATGGTTATATTCGGGCGTCTGGCTGGAAAAAATCGCCGGATATTGAg                                                                                              <  2:108872/149‑1 (MQ=255)                                                          gCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGa                                                                                            <  2:1287410/149‑1 (MQ=255)                                                           cGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGAt                                                                                           <  1:820559/149‑1 (MQ=255)                                                                  gAATTCTTTTATCGATCATGTTTTATCCCGTAGTCATACCCGCATTTGTGTGTGTGCTGAATACTGGCGCGATTATCTGAAACTGAGCGGAAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAgg                                                                                    <  1:925968/149‑1 (MQ=255)                                                                   taTACTTTTATCGATCATGATTTATCCCGTTGTCATACCCGCATTGGTGTTGGTGCTGAATACTGGCGCGTTTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTTGAAAAAATCGCCGGATATTGAGGATTATCAGGa                                                                                   <  1:1238701/148‑1 (MQ=255)                                                                   aaTACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTCGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGa                                                                                   <  1:92299/149‑1 (MQ=255)                                                                    aTACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTTTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGaa                                                                                  <  1:346513/149‑1 (MQ=255)                                                                     tACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAAc                                                                                 >  1:556347/1‑149 (MQ=255)                                                                        ttttATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGcc                                                                              >  1:766258/1‑149 (MQ=255)                                                                        ttttATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTAGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGcc                                                                              >  1:442943/1‑149 (MQ=255)                                                                            aTCGATCATGATCTATACCTTAGTCATCCCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAACATCCCCGGATATTGAGGATTATCAGGAACGCCCGGc                                                                          <  2:1576184/149‑1 (MQ=255)                                                                               gATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGaa                                                                       >  1:1424997/1‑149 (MQ=255)                                                                               gATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTAGATTCGGGCTTCTTGCTGGAAAAAATCGACGGATATTGCGGATTATCAGGAACGCCCGGCGaa                                                                       >  2:204263/1‑149 (MQ=255)                                                                                aTCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCTATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGGGAAt                                                                      >  2:658464/1‑149 (MQ=255)                                                                                aTCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAAt                                                                      >  1:32883/1‑149 (MQ=255)                                                                                   atcatatATCCCGTAGTCATACCAGCAATGGAGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGACCGCCAATTGTAATAATCGGGCTTCTGGCTGGAAAAACTCGCCGTATAATGAGCAATATCAGGAACGCCCGGCGAATGGc                                                                   <  1:1120146/143‑1 (MQ=255)                                                                                   aTGATTTATCCCGTAGTCATACCCGGATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACAGAGCGCCATTGGTTATATTCGGGCTTCTGGCTGGAAAAAATCCCCGCATATTGAGGATTTTCAGCAACGCCCGGCGaaagcc                                                                   >  2:1472321/1‑145 (MQ=255)                                                                                      aTTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTgg                                                                <  2:644585/149‑1 (MQ=255)                                                                                      aTTTATCACGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCAAATGGTTATATTCGGTCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGTACGCCCGGCGAATGGCggg                                                                <  2:805730/149‑1 (MQ=255)                                                                                       tttATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTggg                                                               >  1:1573621/1‑149 (MQ=255)                                                                                       tttATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTggg                                                               <  1:1004001/149‑1 (MQ=255)                                                                                             ccGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTc                                                         <  1:1019906/149‑1 (MQ=255)                                                                                              cGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCg                                                        >  2:353316/1‑149 (MQ=255)                                                                                               gTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGt                                                       <  2:556347/149‑1 (MQ=255)                                                                                               gTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGt                                                       >  1:967379/1‑149 (MQ=255)                                                                                               gTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGt                                                       >  1:215240/1‑149 (MQ=255)                                                                                                aaGTCAAACCCGCATTGGTGTTGGGGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTg                                                      <  2:271190/148‑1 (MQ=255)                                                                                                 aGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCTCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTAGCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGc                                                     <  1:269323/149‑1 (MQ=255)                                                                                                      tACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAgg                                                >  2:1326289/1‑149 (MQ=255)                                                                                                       aCCCGCTTTGGTGTTGGTTCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAggg                                               <  1:1443479/149‑1 (MQ=255)                                                                                                       aCCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAggg                                               <  1:1622114/149‑1 (MQ=255)                                                                                                          cGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATGGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTa                                            <  1:257921/149‑1 (MQ=255)                                                                                                                ggtgttggtgCGGAATACTGGCGCGATTATCTGAATCTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTAcc                                      <  1:459596/149‑1 (MQ=255)                                                                                                                 gtgttggtgCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTAccc                                     >  1:1057240/1‑149 (MQ=255)                                                                                                                 gtgttggtgCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTAccc                                     >  2:471251/1‑149 (MQ=255)                                                                                                                    ttggtgCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACTCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGcc                                  >  1:1013850/1‑149 (MQ=255)                                                                                                                    ttggtgCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGcc                                  >  1:1305994/1‑149 (MQ=255)                                                                                                                          cGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCg                            >  2:751387/1‑149 (MQ=255)                                                                                                                           ggAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTTTCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGc                           >  1:1368505/1‑149 (MQ=255)                                                                                                                              aTACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCCGATATTGAGGATTATCAGGAACGCCCGGCGAATCGCTGGGATATTCGTGCTGACGGCTATTTACCCGCCTGGCCGCAGc                        >  1:485544/1‑149 (MQ=255)                                                                                                                                 cagccgcgATTATCTCAACCTGAGCCCGAATGGTTATATTCCGGCTTCTGGCCCGAAAAAATCGCCGGATATTGAGGATTCTCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTg                     <  2:721718/145‑1 (MQ=255)                                                                                                                                  tGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTgg                    <  2:1276881/149‑1 (MQ=255)                                                                                                                                   ggCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGACCGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGgc                   <  2:1206365/149‑1 (MQ=255)                                                                                                                                   ggCGCGAATCTGTGAAACAGACCGCCAAAGCTCATATTCGGGGTTCTGGCTGGAAAAACTCGCCGGAGAGCGAGGCTGCTCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCGGCGGGCGAATTCCCCGCCTGGCCGCAGcggggc                   <  2:107796/149‑6 (MQ=255)                                                                                                                                     cgcgATTATCTGAAACTGAGCGCCAATGGTTTTATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGgcgc                 >  1:534654/1‑149 (MQ=255)                                                                                                                                      gcgATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGAAATTGAGGATTATCAGAAACGCCCGGCGAATGGCAGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCa                >  1:747446/1‑149 (MQ=255)                                                                                                                                          ttATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGcc            <  1:878479/149‑1 (MQ=255)                                                                                                                                            aTCTGAACCTGAGCGCACATGGATATATTCGGGCTGCTGGCGTGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTg          <  2:1456231/149‑1 (MQ=255)                                                                                                                                              cTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGAt        <  2:766258/149‑1 (MQ=255)                                                                                                                                              atcacccTGAGCGCCAATGGTTATATTCGGGCTTCTGGCGGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGAt        <  2:507410/143‑1 (MQ=255)                                                                                                                                               tcacccTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCAGATg       >  2:1002131/6‑149 (MQ=255)                                                                                                                                               tGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATAGTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGATg       >  2:410862/1‑149 (MQ=255)                                                                                                                                                 aaaCTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCGGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGATGTa     >  2:1189913/1‑149 (MQ=255)                                                                                                                                                    cTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGATGTATGa  >  2:152136/1‑149 (MQ=255)                                                                                                                                                    |                                                                                                                                                     CGTACTCAGTCAAATATTGGTTTTGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGATGTATGA  >  NC_000913_3_hsa_pgi/314837‑315132

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.