New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 291401NA (NA)32 (0.320) 26/296 4.5 33.3% intergenic (‑55/‑3) insA/yagJ IS1 repressor TnpA/CP4‑6 prophage; uncharacterized protein;Phage or Prophage Related
?NC_000913_3_hsa_pgi 314984 = 64 (0.630)pseudogene (628/872 nt) eaeH pseudogene, attaching and effacing protein homology;factor; Not classified
Rejected: Coverage evenness skew score above cutoff.

CGTACTCAGTCAAATATTGGTTTTGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGATGTATGA  >  NC_000913_3_hsa_pgi/314837‑315132
                                                                                                                                                   |                                                                                                                                                    
cGTACTCAGTCAAATATTGGTTTTGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACt                                                                                                                                                     <  2:688/149‑1 (MQ=255)
           aaaTATTGGTTTTGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATg                                                                                                                                          >  2:878479/1‑149 (MQ=255)
           aaaTATTGGTTTTGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATATATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTTACTGAAACTGAGAGCCAATg                                                                                                                                          >  2:1443479/1‑149 (MQ=255)
            aaTATTGGGTTTGGCTGGGGTGATTATTCATGAAATGACTGGATGGCGGGCGTGAATACTTTTATCGATCATGTTTTTTCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATgg                                                                                                                                         <  1:979585/149‑1 (MQ=255)
             atatTGGTTTTGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGccggtaat                                                                                                                                        <  1:1331909/149‑7 (MQ=255)
                ttGGTTTTGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATACCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCTCGATTATCTGAAACTGAGCGCCAATGTTtat                                                                                                                                     >  1:721718/1‑149 (MQ=255)
                  ggTTTTGGCTGGCGTCATTTTTCAGGAAATGTCTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTatat                                                                                                                                   <  1:244988/149‑1 (MQ=255)
                    ttttGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTc                                                                                                                                 >  2:257921/1‑149 (MQ=255)
                           tggcGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTc                                                                                                                          >  2:1622114/1‑149 (MQ=255)
                           tggcGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACACGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTc                                                                                                                          >  1:1278666/1‑149 (MQ=255)
                               ggcATTTTTCAGGAAATCACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGGCATACCCGCATTGGGGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTctggc                                                                                                                      <  2:270766/147‑1 (MQ=255)
                                  aTTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTctggctgg                                                                                                                   >  1:1276881/1‑149 (MQ=255)
                                          ggAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATc                                                                                                           >  2:1004001/1‑149 (MQ=255)
                                                       tGGCGGCTGTGAATACTTTTATCGAACATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGGGCGGAATACTGGCGCGATTATCTGACACTGAGCGCCAATGGTTATATTCGGGCGTCTGGCTGGAAAAAATCGCCGGATATTGAg                                                                                              <  2:108872/149‑1 (MQ=255)
                                                         gCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGa                                                                                            <  2:1287410/149‑1 (MQ=255)
                                                          cGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGAt                                                                                           <  1:820559/149‑1 (MQ=255)
                                                                 gAATTCTTTTATCGATCATGTTTTATCCCGTAGTCATACCCGCATTTGTGTGTGTGCTGAATACTGGCGCGATTATCTGAAACTGAGCGGAAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAgg                                                                                    <  1:925968/149‑1 (MQ=255)
                                                                  taTACTTTTATCGATCATGATTTATCCCGTTGTCATACCCGCATTGGTGTTGGTGCTGAATACTGGCGCGTTTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTTGAAAAAATCGCCGGATATTGAGGATTATCAGGa                                                                                   <  1:1238701/148‑1 (MQ=255)
                                                                  aaTACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTCGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGa                                                                                   <  1:92299/149‑1 (MQ=255)
                                                                   aTACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTTTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGaa                                                                                  <  1:346513/149‑1 (MQ=255)
                                                                    tACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAAc                                                                                 >  1:556347/1‑149 (MQ=255)
                                                                       ttttATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGcc                                                                              >  1:766258/1‑149 (MQ=255)
                                                                       ttttATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTAGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGcc                                                                              >  1:442943/1‑149 (MQ=255)
                                                                           aTCGATCATGATCTATACCTTAGTCATCCCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAACATCCCCGGATATTGAGGATTATCAGGAACGCCCGGc                                                                          <  2:1576184/149‑1 (MQ=255)
                                                                              gATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGaa                                                                       >  1:1424997/1‑149 (MQ=255)
                                                                              gATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTAGATTCGGGCTTCTTGCTGGAAAAAATCGACGGATATTGCGGATTATCAGGAACGCCCGGCGaa                                                                       >  2:204263/1‑149 (MQ=255)
                                                                               aTCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCTATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGGGAAt                                                                      >  2:658464/1‑149 (MQ=255)
                                                                               aTCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAAt                                                                      >  1:32883/1‑149 (MQ=255)
                                                                                  atcatatATCCCGTAGTCATACCAGCAATGGAGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGACCGCCAATTGTAATAATCGGGCTTCTGGCTGGAAAAACTCGCCGTATAATGAGCAATATCAGGAACGCCCGGCGAATGGc                                                                   <  1:1120146/143‑1 (MQ=255)
                                                                                  aTGATTTATCCCGTAGTCATACCCGGATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACAGAGCGCCATTGGTTATATTCGGGCTTCTGGCTGGAAAAAATCCCCGCATATTGAGGATTTTCAGCAACGCCCGGCGaaagcc                                                                   >  2:1472321/1‑145 (MQ=255)
                                                                                     aTTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTgg                                                                <  2:644585/149‑1 (MQ=255)
                                                                                     aTTTATCACGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCAAATGGTTATATTCGGTCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGTACGCCCGGCGAATGGCggg                                                                <  2:805730/149‑1 (MQ=255)
                                                                                      tttATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTggg                                                               >  1:1573621/1‑149 (MQ=255)
                                                                                      tttATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTggg                                                               <  1:1004001/149‑1 (MQ=255)
                                                                                            ccGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTc                                                         <  1:1019906/149‑1 (MQ=255)
                                                                                             cGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCg                                                        >  2:353316/1‑149 (MQ=255)
                                                                                              gTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGt                                                       <  2:556347/149‑1 (MQ=255)
                                                                                              gTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGt                                                       >  1:967379/1‑149 (MQ=255)
                                                                                              gTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGt                                                       >  1:215240/1‑149 (MQ=255)
                                                                                               aaGTCAAACCCGCATTGGTGTTGGGGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTg                                                      <  2:271190/148‑1 (MQ=255)
                                                                                                aGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCTCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTAGCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGc                                                     <  1:269323/149‑1 (MQ=255)
                                                                                                     tACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAgg                                                >  2:1326289/1‑149 (MQ=255)
                                                                                                      aCCCGCTTTGGTGTTGGTTCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAggg                                               <  1:1443479/149‑1 (MQ=255)
                                                                                                      aCCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAggg                                               <  1:1622114/149‑1 (MQ=255)
                                                                                                         cGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATGGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTa                                            <  1:257921/149‑1 (MQ=255)
                                                                                                               ggtgttggtgCGGAATACTGGCGCGATTATCTGAATCTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTAcc                                      <  1:459596/149‑1 (MQ=255)
                                                                                                                gtgttggtgCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTAccc                                     >  1:1057240/1‑149 (MQ=255)
                                                                                                                gtgttggtgCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTAccc                                     >  2:471251/1‑149 (MQ=255)
                                                                                                                   ttggtgCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACTCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGcc                                  >  1:1013850/1‑149 (MQ=255)
                                                                                                                   ttggtgCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGcc                                  >  1:1305994/1‑149 (MQ=255)
                                                                                                                         cGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCg                            >  2:751387/1‑149 (MQ=255)
                                                                                                                          ggAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTTTCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGc                           >  1:1368505/1‑149 (MQ=255)
                                                                                                                             aTACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCCGATATTGAGGATTATCAGGAACGCCCGGCGAATCGCTGGGATATTCGTGCTGACGGCTATTTACCCGCCTGGCCGCAGc                        >  1:485544/1‑149 (MQ=255)
                                                                                                                                cagccgcgATTATCTCAACCTGAGCCCGAATGGTTATATTCCGGCTTCTGGCCCGAAAAAATCGCCGGATATTGAGGATTCTCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTg                     <  2:721718/145‑1 (MQ=255)
                                                                                                                                 tGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTgg                    <  2:1276881/149‑1 (MQ=255)
                                                                                                                                  ggCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGACCGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGgc                   <  2:1206365/149‑1 (MQ=255)
                                                                                                                                  ggCGCGAATCTGTGAAACAGACCGCCAAAGCTCATATTCGGGGTTCTGGCTGGAAAAACTCGCCGGAGAGCGAGGCTGCTCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCGGCGGGCGAATTCCCCGCCTGGCCGCAGcggggc                   <  2:107796/149‑6 (MQ=255)
                                                                                                                                    cgcgATTATCTGAAACTGAGCGCCAATGGTTTTATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGgcgc                 >  1:534654/1‑149 (MQ=255)
                                                                                                                                     gcgATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGAAATTGAGGATTATCAGAAACGCCCGGCGAATGGCAGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCa                >  1:747446/1‑149 (MQ=255)
                                                                                                                                         ttATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGcc            <  1:878479/149‑1 (MQ=255)
                                                                                                                                           aTCTGAACCTGAGCGCACATGGATATATTCGGGCTGCTGGCGTGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTg          <  2:1456231/149‑1 (MQ=255)
                                                                                                                                             cTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGAt        <  2:766258/149‑1 (MQ=255)
                                                                                                                                             atcacccTGAGCGCCAATGGTTATATTCGGGCTTCTGGCGGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGAt        <  2:507410/143‑1 (MQ=255)
                                                                                                                                              tcacccTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCAGATg       >  2:1002131/6‑149 (MQ=255)
                                                                                                                                              tGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATAGTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGATg       >  2:410862/1‑149 (MQ=255)
                                                                                                                                                aaaCTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCGGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGATGTa     >  2:1189913/1‑149 (MQ=255)
                                                                                                                                                   cTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGATGTATGa  >  2:152136/1‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                    
CGTACTCAGTCAAATATTGGTTTTGGCTGGCGTCATTTTTCAGGAAATGACTGGATGGCGGGGGTGAATACTTTTATCGATCATGATTTATCCCGTAGTCATACCCGCATTGGTGTTGGTGCGGAATACTGGCGCGATTATCTGAAACTGAGCGCCAATGGTTATATTCGGGCTTCTGGCTGGAAAAAATCGCCGGATATTGAGGATTATCAGGAACGCCCGGCGAATGGCTGGGATATTCGTGCTGAGGGCTATTTACCCGCCTGGCCGCAGCTTGGCGCAAGCCTGATGTATGA  >  NC_000913_3_hsa_pgi/314837‑315132

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.