BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913_3_hsa_pgi	= 4254028	NA (NA)	244 (1.080)	35/180	11.9	NA	noncoding (100/130 nt)	RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site	RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site
*	?	NC_000913_3_hsa_pgi	= 4254058	NA (NA)	244 (1.080)	35/180	11.9	NA	noncoding (130/130 nt)	RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site	RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 457 total aligned reads displayed.

CCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgccggat‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_hsa_pgi/4253930‑4254028

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCAT  <  NC_000913_3_hsa_pgi/4254058‑4253965

CCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGG                                                                                               >  1:4162997/1‑100

CCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGG                                                                                               >  2:1919020/1‑100

CCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGG                                                                                               >  1:1903680/1‑100

CCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGG                                                                                               <  2:177777/100‑1

 CGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGC                                                                                              >  2:3867197/1‑100

 CGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGC                                                                                              >  1:937900/1‑100

 CGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGC                                                                                              <  1:1650628/100‑1

 CGGATGAACATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGC                                                                                              >  1:3461610/1‑100

  GGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATGGCAATTTATTGAATTTGCAGATTATGGAAGGCC                                                                                             >  2:2670113/1‑100

  GGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCCCTTTATTGAATTTGCAGATTATGGAAGGC                                                                                              >  2:4416481/1‑99

  GGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCC                                                                                             >  1:482283/1‑100

  GGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCC                                                                                             >  1:2461558/1‑100

  GGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCC                                                                                             >  1:2538614/1‑100

  GGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCC                                                                                             >  2:4905018/1‑100

  GGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCC                                                                                             >  1:3117087/1‑100

  GGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGC                                                                                              >  2:3183165/1‑99

   GATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCG                                                                                            <  1:744217/100‑1

   GATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCG                                                                                            <  1:4514201/100‑1

   GATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCG                                                                                            >  2:2089630/1‑100

   GATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCG                                                                                            <  2:5068145/100‑1

   GATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCG                                                                                            <  2:5458676/100‑1

   GATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCC                                                                                             <  2:3357255/99‑1

   GATGATCATCAGGCTTTCTTCTGGGTTGCCTGATGCGCGGTGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCG                                                                                            <  2:5974784/100‑1

    ATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGG                                                                                           <  2:4112558/100‑1

    ATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGG                                                                                           <  2:4358263/100‑1

     TGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGA                                                                                          >  1:2170659/1‑100

     TGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGA                                                                                          <  1:4853800/100‑1

     TGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGA                                                                                          <  2:159700/100‑1

     TGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGA                                                                                          >  1:2730379/1‑100

     TGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGA                                                                                          >  2:2007897/1‑100

     TGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGA                                                                                          <  1:314381/100‑1

     TGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCG                                                                                            >  2:4572153/1‑98

       ATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGAT                                                                                         <  1:827241/99‑1

       ATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGAT                                                                                         <  1:4357319/99‑1

       ATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGAT                                                                                         <  1:140662/99‑1

       ATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGAT                                                                                         >  2:1476310/1‑99

       ATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGAT                                                                                         <  1:5248628/99‑1

       ATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGA                                                                                          <  2:649573/98‑1

       ATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCG                                                                                            >  2:5812095/1‑96

          ATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCG                                                                                      >  2:3830406/1‑99

               GCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCCGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGG                                                                                           <  2:1800977/89‑1

                CTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAA                                                                               <  1:1068871/100‑1

                         GGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATC                                                                      >  2:5575517/1‑100

                          GGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCC                                                                     <  2:3755601/100‑1

                          GGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCC                                                                     <  1:758187/100‑1

                          GGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCC                                                                     <  2:3496685/100‑1

                          GGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCC                                                                     <  1:5415471/100‑1

                          GGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCC                                                                     <  1:4578480/100‑1

                          GGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCC                                                                     <  1:4098736/100‑1

                          GGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCC                                                                     <  1:4039767/100‑1

                          GGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATC                                                                      <  2:3647726/99‑1

                          GGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATC                                                                      <  2:2243493/99‑1

                           GTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCG                                                                    <  1:5390894/100‑1

                            TTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGG                                                                   <  2:3011116/100‑1

                            TTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGG                                                                   <  2:3533891/100‑1

                            TTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGG                                                                   <  2:1046019/100‑1

                            TTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGG                                                                   <  1:5613212/100‑1

                            TTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGG                                                                   <  1:4222471/100‑1

                            TTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGG                                                                   <  2:5312180/100‑1

                            TTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGG                                                                   <  1:2357255/100‑1

                            TTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTT                                                                         <  2:307/94‑1

                            TTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATGTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGG                                                                   <  2:4002694/100‑1

                            TTGCCGGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGG                                                                   <  2:590578/100‑1

                              GCCTGATGCGCGGTGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  2:4643357/99‑1

                              GCCTGATGCGCGGCTCGTCTCAGGCCTATACAACACATCGCAATTTATTGAATTTGCAGTTTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  2:762883/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGTAATTTATTGAATTTGCACATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:4778383/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  2:5178414/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  2:890419/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  2:254084/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:1152680/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:1369371/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:1394037/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:1471031/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:1595992/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:2032967/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:2949346/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:3055373/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:332096/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:36520/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:3872968/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:3937033/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:537031/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:5900874/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  2:1180810/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCAGAATGCGGCGAAAACGCCTTATCCGGC                                                                  <  2:127253/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATCGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:5794195/99‑1

                              GCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTGATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  1:5456479/99‑1

                               CCTGATGCGCGGCGCTTCTCAGGCGTACACAACACAGCGCAACTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGATAACGCCTTATCCGGC                                                                  <  2:5874734/98‑1

                               CCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGCCT                                                                <  2:3256552/100‑1

                               CCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGCCT                                                                <  2:4705460/100‑1

                               CCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGCCT                                                                <  1:2306611/100‑1

                               CCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGCCT                                                                <  2:572192/100‑1

                               CCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGCCT                                                                <  1:630019/100‑1

                               CCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTGATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGC                                                                  <  2:4232495/98‑1

                                   ATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCA                                                            <  2:2828439/100‑1

                                   ATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTC                                                              <  1:5180834/98‑1

                                    TGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGG                                                                   >  2:2324164/1‑92

                                      CGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTAT                                                                       >  1:600518/1‑86

                                                   AGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATT                                               <  1:3834944/97‑1

                                                    GGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGGCCGGATGCGGCGAAAACGCCTTATCCG                                                                    >  1:3509239/1‑75

CCGGATGATCATCCGGCTTTCTTCTGGGTTGCCTGATGCGCGGCGCTTCTCAGGCCTACACAACACATCGCAATTTATTGAATTTGCAGATTATGGAAGgccggat‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913_3_hsa_pgi/4253930‑4254028

‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GCCGGATGCGGCGAAAACGCCTTATCCGGCCTTCCATAATCTGCAAATTCAATAAATTGCGATGTGTTGTGTAGGCCTGAGAAGCGCCGCGCAT  <  NC_000913_3_hsa_pgi/4254058‑4253965

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.