New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi 4236244 =3502 (14.450)233 (1.070) 36/174 10.9 7.0% intergenic (+68/‑46) yjbE/yjbF extracellular polysaccharide production threonine‑rich protein/extracellular polysaccharide production lipoprotein
?NC_000913_3_hsa_pgi 4236268 = 3017 (13.880)intergenic (+92/‑22) yjbE/yjbF extracellular polysaccharide production threonine‑rich protein/extracellular polysaccharide production lipoprotein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 3542 total aligned reads displayed.

CCACCACAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCC  >  NC_000913_3_hsa_pgi/4236145‑4236343
                                                                                                   |                                                                                                   
ccaccaCAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATtaacca                                                                                                     >  2:1570024/1‑100 (MQ=255)
ccaccaCAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATtaacca                                                                                                     >  1:4101528/1‑100 (MQ=255)
ccaccaCAACCACGACCACCAGTACCCAGTAATAAAGCATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATtaacca                                                                                                     >  2:1867566/1‑100 (MQ=255)
  accacAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATtaaccat                                                                                                    >  1:4343396/1‑99 (MQ=255)
     acaACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATGATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATtaaccataacc                                                                                                <  2:2295030/100‑1 (MQ=255)
     acaACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATtaaccataacc                                                                                                <  2:1478715/100‑1 (MQ=255)
     acaACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATtaaccataacc                                                                                                <  1:379311/100‑1 (MQ=255)
       aaCCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACcac                                                                                              <  1:2420619/100‑1 (MQ=255)
         ccACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACcaca                                                                                             >  2:3252029/1‑99 (MQ=255)
             gACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTcc                                                                                         <  2:1675528/99‑1 (MQ=255)
             gACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCg                                                                                        >  1:289187/1‑100 (MQ=255)
              accaccAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCgg                                                                                       >  1:5191004/1‑100 (MQ=255)
              accaccAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCgg                                                                                       >  1:2554213/1‑100 (MQ=255)
                caccaGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGgtg                                                                                     <  2:3010815/100‑1 (MQ=255)
                 accaGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGgtgt                                                                                    >  1:3704002/1‑100 (MQ=255)
                  ccaGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGtgtg                                                                                   >  2:2618356/1‑100 (MQ=255)
                  ccaGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGtgtg                                                                                   <  2:4555341/100‑1 (MQ=255)
                  ccaGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGtgtg                                                                                   <  1:700413/100‑1 (MQ=255)
                    aGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGt                                                                                 >  2:362236/1‑100 (MQ=255)
                    aGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGt                                                                                 <  1:766090/100‑1 (MQ=255)
                      tACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGtt                                                                                <  2:5269647/99‑1 (MQ=255)
                       aCCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTAt                                                                              >  2:3993694/1‑100 (MQ=255)
                       aCCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTAt                                                                              >  1:3213650/1‑100 (MQ=255)
                        cccAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTAtt                                                                             >  1:509595/1‑100 (MQ=255)
                        cccAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTAtt                                                                             >  2:374919/1‑100 (MQ=255)
                          cAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCt                                                                           >  1:3000862/1‑100 (MQ=255)
                          cAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCt                                                                           >  2:2517884/1‑100 (MQ=255)
                            gTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGCTATTCTGc                                                                         >  2:5679412/1‑100 (MQ=255)
                              aataaAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGccc                                                                       >  1:3574649/1‑100 (MQ=255)
                              aataaAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGccc                                                                       >  1:4464615/1‑100 (MQ=255)
                                   aGTATGTATCCCCAAGATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTg                                                                  <  2:5062331/100‑1 (MQ=255)
                                   aGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTg                                                                  >  1:4653495/1‑100 (MQ=255)
                                   aGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATAAATGGATTAACCATACCCATACTCCGGTGCGGTTAtggt                                                                           >  2:1167519/1‑88 (MQ=255)
                                    gtatgtatCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTgg                                                                 <  1:4214231/100‑1 (MQ=255)
                                     tatgtatCCCCAAAATAATTCGGGTCATTGAATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGga                                                                <  2:48260/100‑1 (MQ=255)
                                     tatgtatCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGga                                                                <  1:2180183/100‑1 (MQ=255)
                                     tatgtatCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGga                                                                <  2:758903/100‑1 (MQ=255)
                                     tatgtatCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGga                                                                <  1:1775556/100‑1 (MQ=255)
                                       tgtatCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTATGgag                                                               >  1:4769856/1‑99 (MQ=255)
                                       tgtatCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAACGGCTTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGgag                                                               >  1:4975186/1‑99 (MQ=255)
                                        gtatCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGgag                                                               >  2:4259250/1‑98 (MQ=255)
                                         tatCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGagaag                                                            <  1:1357514/100‑1 (MQ=255)
                                           tCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAagag                                                          <  1:3097045/100‑1 (MQ=255)
                                            ccccAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGagaa                                                             >  2:2897309/1‑96 (MQ=255)
                                            ccccAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGt                                                         >  2:5377577/1‑100 (MQ=255)
                                             cccAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCAGAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTc                                                        >  2:5790234/1‑100 (MQ=255)
                                              ccAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCg                                                       >  2:883758/1‑100 (MQ=255)
                                                aaaaTAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTg                                                     <  1:389068/100‑1 (MQ=255)
                                                   ataatTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAg                                                  <  2:1357101/100‑1 (MQ=255)
                                                      atTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCg                                                <  2:3842093/99‑1 (MQ=255)
                                                          gAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTg                                           <  1:5403978/100‑1 (MQ=255)
                                                          gAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCCACCTg                                           >  2:5487118/1‑100 (MQ=255)
                                                           aGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGc                                          <  1:1115238/100‑1 (MQ=255)
                                                           aGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGc                                          <  1:4879575/100‑1 (MQ=255)
                                                            gTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCa                                         <  1:1000060/100‑1 (MQ=255)
                                                             tCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCa                                         <  2:5905428/99‑1 (MQ=255)
                                                             tCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCa                                         <  2:1776084/99‑1 (MQ=255)
                                                                ttGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACt                                       >  1:1546742/1‑98 (MQ=255)
                                                                  gCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCAtt                                   >  2:4112522/1‑100 (MQ=255)
                                                                  gCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCAt                                    <  2:1267976/99‑1 (MQ=255)
                                                                   cATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCAtt                                   <  2:4458962/99‑1 (MQ=255)
                                                                    aTCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCt                                 <  2:2789880/100‑1 (MQ=255)
                                                                         tgGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCa                                     >  2:3466320/1‑91 (MQ=255)
                                                                         tgGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTAt                              <  2:5174738/98‑1 (MQ=255)
                                                                         tgGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATc                             <  2:493475/99‑1 (MQ=255)
                                                                          ggCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTg                           >  2:1991565/1‑100 (MQ=255)
                                                                          ggCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTg                           >  1:2052448/1‑100 (MQ=255)
                                                                            cTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGcc                         >  2:4710208/1‑100 (MQ=255)
                                                                               gAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTg                       <  1:3464822/99‑1 (MQ=255)
                                                                               gAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTg                       <  2:2075774/99‑1 (MQ=255)
                                                                               gAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGt                      >  1:4545517/1‑100 (MQ=255)
                                                                                  gTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGttat                   <  1:5586977/100‑1 (MQ=255)
                                                                                   tATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGtaata                  <  1:3321096/100‑2 (MQ=255)
                                                                                    aTGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGttatta                 >  2:2185968/1‑100 (MQ=255)
                                                                                     tGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGttatta                 >  2:4360827/1‑99 (MQ=255)
                                                                                      gAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGttatta                 >  1:1863215/1‑98 (MQ=255)
                                                                                       aaGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAg              >  1:1676089/1‑100 (MQ=255)
                                                                                       aaGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAg              <  1:5689346/100‑1 (MQ=255)
                                                                                        aGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAgg             >  1:4015497/1‑100 (MQ=255)
                                                                                        aGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAgg             >  1:1444268/1‑100 (MQ=255)
                                                                                          ggATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGTAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGcc           <  1:5869463/100‑1 (MQ=255)
                                                                                          ggATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGcc           <  1:2663690/100‑1 (MQ=255)
                                                                                          ggATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGcc           <  1:2310501/100‑1 (MQ=255)
                                                                                            aTTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTAATAACAGGcaga         <  2:3110967/100‑4 (MQ=255)
                                                                                             ttAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGt        >  2:2409409/1‑100 (MQ=255)
                                                                                             ttAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGt        >  2:641206/1‑100 (MQ=255)
                                                                                             ttAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTAATAACAGGcagat        <  1:2778700/100‑5 (MQ=255)
                                                                                             ttAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTAATAACAGGcagat        <  1:905881/100‑5 (MQ=255)
                                                                                              taaccataaccaCACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGtt       >  2:2695082/1‑100 (MQ=255)
                                                                                               cagaataaccaCACCGGCGCGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGt        >  2:391665/5‑98 (MQ=255)
                                                                                               aaccataaccaCACTCCGGTGTGGTTATTCTGCCCCTCTGGCGAAGAGTCGTGAAGCGACCTGCACTGATTCTTATCTGCCTGTTATTACTGGCCTGtt       >  1:5484935/1‑99 (MQ=255)
                                                                                               aaccataaccaCACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGttatta                 >  2:3368454/1‑89 (MQ=255)
                                                                                               aaccataaccaCACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGtt       >  2:4622875/1‑99 (MQ=255)
                                                                                               aaccataaccaCACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGtt       >  2:5571909/1‑99 (MQ=255)
                                                                                               aaccataaccaCACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGtt       >  1:5274270/1‑99 (MQ=255)
                                                                                                accataaccaCACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGtt       >  1:1975711/1‑98 (MQ=255)
                                                                                                  cataaccaCACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGc   <  1:1240990/100‑1 (MQ=255)
                                                                                                   ataaccaCAGTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACTTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGcc  <  1:5974341/100‑1 (MQ=255)
                                                                                                   ataaccaCACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGcc  <  1:964244/100‑1 (MQ=255)
                                                                                                   ataaccaCACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGcc  <  2:1067979/100‑1 (MQ=255)
                                                                                                   |                                                                                                   
CCACCACAACCACGACCACCAGTACCCAGTAATAAAGTATGTATCCCCAAAATAATTCGAGTCATTGCATCTGTGGCTAGAAGTATGAAGGGATTAACCATAACCACACTCCGGTGTGGTTATTCTGCCCCTCTGGAGAAGAGTCGTGAAGCGACCTGCACTCATTCTTATCTGCCTGTTATTACAGGCCTGTTCAGCC  >  NC_000913_3_hsa_pgi/4236145‑4236343

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.