New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913_3_hsa_pgi = 42397783194 (13.180)241 (1.120) 32/172 12.2 7.9% intergenic (+20/+27) yjbH/yjbT DUF940 family extracellular polysaccharide protein/putative periplasmic protein
?NC_000913_3_hsa_pgi = 4239788 2806 (13.060)intergenic (+30/+17) yjbH/yjbT DUF940 family extracellular polysaccharide protein/putative periplasmic protein
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 3222 total aligned reads displayed.

TGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCC  >  NC_000913_3_hsa_pgi/4239689‑4239887
                                                                                                   |                                                                                                   
  gtCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGcactcac                                                                                                   <  2:5839046/100‑1 (MQ=255)
  gtCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGcactcac                                                                                                   <  2:1281603/100‑1 (MQ=255)
   tCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGcactcact                                                                                                  >  1:594497/1‑100 (MQ=255)
    cAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCTACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGcactcact                                                                                                  >  1:982084/1‑99 (MQ=255)
     aGCAACTTGGGTGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTgg                                                                                                <  2:3842794/100‑1 (MQ=255)
     aGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTgg                                                                                                <  2:913414/100‑1 (MQ=255)
       cAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCa                                                                                              >  2:4205795/1‑100 (MQ=255)
        aaCTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCAc                                                                                             <  1:5629465/100‑1 (MQ=255)
         aCTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCAcc                                                                                            <  1:4313145/100‑1 (MQ=255)
            tGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCtt                                                                                          >  1:3761876/1‑99 (MQ=255)
             gggCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTc                                                                                         <  1:5544083/99‑1 (MQ=255)
              ggCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCa                                                                                        <  1:3661590/99‑1 (MQ=255)
              ggCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCAt                                                                                       >  2:850189/1‑100 (MQ=255)
               gCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCAtt                                                                                      >  2:1410222/1‑100 (MQ=255)
                cGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTc                                                                                     <  1:716501/100‑1 (MQ=255)
                cGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTc                                                                                     <  2:307905/100‑1 (MQ=255)
                cGTAAGTTCCAGTTGTAGGACATGACCAGCGACCGTGGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTc                                                                                     <  2:23083/100‑1 (MQ=255)
                 gTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCt                                                                                    <  1:1648514/100‑1 (MQ=255)
                  tAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCAcn                                                                                            <  2:5730201/91‑2 (MQ=255)
                  tAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCtt                                                                                   <  1:2965316/100‑1 (MQ=255)
                    aGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTc                                                                                     >  2:2950455/1‑96 (MQ=255)
                    aGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGGCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTaa                                                                                 >  2:5537168/1‑100 (MQ=255)
                     gTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAAt                                                                                >  2:5634540/1‑100 (MQ=255)
                     gTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAAt                                                                                <  1:4004189/100‑1 (MQ=255)
                      ttCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATg                                                                               >  1:1886552/1‑100 (MQ=255)
                        ccAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATg                                                                               <  1:1324992/98‑1 (MQ=255)
                        ccAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGc                                                                             >  2:3714376/1‑100 (MQ=255)
                         cAGTTGAATGACATGACCAGCGACCGTGGGGTCAATTTCCACTAAGTCATGGGAAATGTGCCAGTTTTCGCACTCACTGGAACCTTCATTCTTAATgg                                                                              <  2:2697752/98‑1 (MQ=255)
                          aGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCt                                                                           >  2:200379/1‑100 (MQ=255)
                           gTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTg                                                                          >  1:2191912/1‑100 (MQ=255)
                              gTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTc                                                                        >  1:1097871/1‑99 (MQ=255)
                              gTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTc                                                                        >  2:5293307/1‑99 (MQ=255)
                               tATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTc                                                                        >  2:2509616/1‑98 (MQ=255)
                               tATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTc                                                                        >  2:1082917/1‑98 (MQ=255)
                               tATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCg                                                                       <  2:4726277/99‑1 (MQ=255)
                               tATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCg                                                                       <  1:5072139/99‑1 (MQ=255)
                                 tgacatgacCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAg                                                                     <  2:2437338/99‑1 (MQ=255)
                                 tgacatgacCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAg                                                                     <  2:640079/99‑1 (MQ=255)
                                 tgacatgacCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGc                                                                    <  1:2852095/100‑1 (MQ=255)
                                 tgacatgacCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGc                                                                    >  1:1976470/1‑100 (MQ=255)
                                   acatgacCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGcc                                                                   <  1:2298149/99‑1 (MQ=255)
                                   acatgacCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCa                                                                  <  1:2682812/100‑1 (MQ=255)
                                   acatgacCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTGCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGc                                                                    <  1:4777849/98‑1 (MQ=255)
                                      tgacCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCAt                                                                 >  1:3151321/1‑98 (MQ=255)
                                      tgacCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCAt                                                                 >  1:4927929/1‑98 (MQ=255)
                                      tgacCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCa                                                               <  1:4518013/100‑1 (MQ=255)
                                      tgacCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCa                                                               <  2:163007/100‑1 (MQ=255)
                                         ccAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAgg                                                             >  1:5288470/1‑99 (MQ=255)
                                         ccAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAg                                                              >  1:3574478/1‑98 (MQ=255)
                                         ccAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGa                                                            <  1:1760760/100‑1 (MQ=255)
                                             cGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAg                                                              <  2:2847180/94‑1 (MQ=255)
                                             cGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACg                                                         <  2:2213117/99‑1 (MQ=255)
                                             cGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGc                                                        <  1:3354270/100‑1 (MQ=255)
                                                 cGTAGCGTCAATGTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGtt                                                    <  2:210017/100‑1 (MQ=255)
                                                  gTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTc                                                   <  1:4106866/100‑1 (MQ=255)
                                                  gTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTc                                                   <  1:1537115/100‑1 (MQ=255)
                                                     gCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCAc                                                 >  2:4815942/1‑99 (MQ=255)
                                                      cGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTc                                               >  2:1511269/1‑100 (MQ=255)
                                                       gTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTcc                                              >  1:3485881/1‑100 (MQ=255)
                                                          aaTTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCgg                                           >  2:4344770/1‑100 (MQ=255)
                                                          aaTTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCg                                            >  2:4598046/1‑99 (MQ=255)
                                                            tttCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGtt                                         <  1:807312/100‑1 (MQ=255)
                                                             ttCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGttt                                        >  2:4498592/1‑100 (MQ=255)
                                                                cGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGc                                      >  2:337792/1‑99 (MQ=255)
                                                                cGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGc                                      <  2:3962330/99‑1 (MQ=255)
                                                                cGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGc                                      <  1:3038973/99‑1 (MQ=255)
                                                                cGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGc                                      <  1:4214732/99‑1 (MQ=255)
                                                                cGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGCCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCg                                     <  2:5945854/100‑1 (MQ=255)
                                                                  cTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGAt                                   <  1:1415038/100‑1 (MQ=255)
                                                                      gTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTgg                               >  1:2779989/1‑100 (MQ=255)
                                                                        cATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGgtg                             >  2:725271/1‑100 (MQ=255)
                                                                         aTGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGgtgt                            >  2:3160048/1‑100 (MQ=255)
                                                                         aTGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGgtgt                            <  1:121697/100‑1 (MQ=255)
                                                                          tGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGgtgtg                           >  2:1752548/1‑100 (MQ=255)
                                                                          tGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGgtgtg                           >  1:1002390/1‑100 (MQ=255)
                                                                            ggAAAGGTGCCAGTTTTCGCACTCACTCGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGgtgtgt                          >  1:5824633/1‑99 (MQ=255)
                                                                              aaaGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTaaa                       <  1:897717/100‑1 (MQ=255)
                                                                              aaaGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTaaa                       <  1:5400717/100‑1 (MQ=255)
                                                                               aaGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAg                      <  2:1881509/100‑1 (MQ=255)
                                                                               aaGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAg                      >  2:5084209/1‑100 (MQ=255)
                                                                                aGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAgg                     <  1:2608383/100‑1 (MQ=255)
                                                                                 ggTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGc                    >  2:495617/1‑100 (MQ=255)
                                                                                  gTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGc                    <  2:4098657/99‑1 (MQ=255)
                                                                                  gTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCg                   <  2:1180730/100‑1 (MQ=255)
                                                                                   tGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCg                   >  1:3886985/1‑99 (MQ=255)
                                                                                    gCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGa                  >  1:252166/1‑99 (MQ=255)
                                                                                     ccAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGaaa                <  1:439730/100‑1 (MQ=255)
                                                                                     ccAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGaaa                <  1:520365/100‑1 (MQ=255)
                                                                                      cAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGaaaa               >  1:2427101/1‑100 (MQ=255)
                                                                                      cAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGaaaa               <  2:3238714/100‑1 (MQ=255)
                                                                                            tCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCt         >  1:3223606/1‑100 (MQ=255)
                                                                                             cGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTg        >  1:5711317/1‑100 (MQ=255)
                                                                                             cGCACTCACTGGCACCTTCATTCTTAACGGCCTGCCGCGCCATCAGCAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCt         <  2:5411629/99‑1 (MQ=255)
                                                                                              gCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTg        <  2:5201688/99‑1 (MQ=255)
                                                                                              gCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTg        <  2:3617373/99‑1 (MQ=255)
                                                                                              gCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTg        <  1:612173/99‑1 (MQ=255)
                                                                                              gCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGt       <  2:2624514/100‑1 (MQ=255)
                                                                                                actcactGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCt     <  1:2079691/100‑1 (MQ=255)
                                                                                                actcactGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCt     <  2:3481926/100‑1 (MQ=255)
                                                                                                   cactGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGAGAAAACATTCTGTCTTcc  >  1:4622385/1‑100 (MQ=255)
                                                                                                   |                                                                                                   
TGGTCAGCAACTTGGGCGTAAGTTCCAGTTGTATGACATGACCAGCGACCGTAGCGTCAATTTCCGCTAAGTCATGGGAAAGGTGCCAGTTTTCGCACTCACTGGCACCTTCATTCTTAATGGCCTGTCGAGCCATCAGGAACGCAGTTCACTCCCGGTTTGCGATCTGGTGTGTAAAGGCGAAAACATTCTGTCTTCC  >  NC_000913_3_hsa_pgi/4239689‑4239887

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.