| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913_3_hsa_pgi | 4218568 = | 64 (1.250) | 585 (12.230) | 179/236 | -0.0 | 90.7% | intergenic (+155/‑28) | aceA/aceK | isocitrate lyase/isocitrate dehydrogenase kinase/phosphatase |
| ? | NC_000913_3_hsa_pgi | = 4254058 | NA (NA) | noncoding (130/130 nt) | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | RIP317 (repetitive extragenic palindromic) element; contains 3 REP sequences and 1 IHF site | |||||
Only 100 of 779 total aligned reads displayed.
ACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGC > NC_000913_3_hsa_pgi/4218420‑4218716 | tgatgatgtcaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAAtt > 2:179847‑M1/146‑149 (MQ=255) tgatgatgtaaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggatcaggcgttttcgccgcatccggcAAtt < 1:801036‑M1/4‑1 (MQ=255) tgatgatgtaaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAAtt > 1:193311‑M1/146‑149 (MQ=255) tgatgtaaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATtctc > 1:515892‑M1/143‑149 (MQ=255) taaaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTc > 1:205171‑M1/138‑149 (MQ=255) aaaaagccggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCt > 1:947860‑M1/136‑149 (MQ=255) cggatgatcatccggctttcttctgggttgcctgatgcgcgccgctgcgcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAgg > 1:440416‑M1/129‑149 (MQ=255) ggatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAggg > 2:158801‑M1/128‑149 (MQ=255) gatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGgc > 1:81637‑M1/127‑149 (MQ=255) gatgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGgc < 1:52927‑M1/23‑1 (MQ=255) atgatcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatgtaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGgcg < 2:450748‑M1/24‑1 (MQ=255) atgatcatccggcttacttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccccatccggcAATTCTCTGCTCCTGATGAGGgcg < 2:742911‑M1/24‑1 (MQ=255) tgttcatccggctttcttctgggttgcctgatgcgcgccgcttctcgcgcctacacaacacatcccgatttagtgaattttcacagtatagaatgccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGgcgc > 2:590750‑M1/125‑149 (MQ=255) atcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTa < 1:279712‑M1/27‑1 (MQ=255) tcatccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTaa > 1:390854‑M1/122‑149 (MQ=255) cacccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTaaa > 1:324507‑M1/121‑149 (MQ=255) tccggctttcttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATg < 1:562360‑M1/31‑1 (MQ=255) gctttcttctgggttgtctgatgcgctgcgctcctcaggcctatacaacgcatcgcaatttattgaatttgcagatcatggaaggccggataaggcggtttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCcgc > 1:222538‑M1/115‑149 (MQ=255) cttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGc < 1:98570‑M1/40‑1 (MQ=255) ttctgggttgcctgatgggcggcgcttctcaggcctacacaactcttcgcaatttattgaatttgcagttgatggaagaccagataagtctttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGcc > 1:236709‑M1/109‑149 (MQ=255) ttctgggttgcctgatgcgcggcgcttctcgggcctacacaacacatcgcaatttattgaatttgcagaatatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGCGCGCTAAATGCCGCGTGGcc < 1:46488‑M1/41‑1 (MQ=255) ttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttcttgaatttgcagattgtggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCCCCTGATGAGGGCGCTAAATGCCGCGTGGcc < 1:924938‑M1/41‑1 (MQ=255) ttctgggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGcc < 2:225107‑M1/41‑1 (MQ=255) gggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAgg > 1:336430‑M1/105‑125 (MQ=255) ggttgcctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGTTGAGGGCGCTAAATGCCGCGTGGCCTGGaa > 1:595135‑M1/104‑149 (MQ=255) ggCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGCCCTGGCatt > 1:411176/1‑149 (MQ=255) gCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAatta > 2:493696/1‑149 (MQ=255) cctgctgcgcggctcttctaaggcctacacaacacatcgcaattgattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattatt > 1:778829‑M1/99‑149 (MQ=255) cctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGgc > 2:813929‑M1/99‑121 (MQ=255) cctgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAattatt < 1:483073‑M1/51‑1 (MQ=255) tgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattga > 2:112625‑M1/97‑149 (MQ=255) tgatgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattga < 1:957404‑M1/53‑1 (MQ=255) ggatgggcggggcttcccaggcctactcaacccatcgcgatttattgaatttgcagattatggaaggccggataaggcggtttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattga > 2:481307‑M1/97‑149 (MQ=255) tgcgcggcgttgctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTattgattg > 1:87574‑M1/94‑149 (MQ=255) tgcgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAACTGCCGCGTGGCCTGGAATTattgattg < 2:436117‑M1/56‑1 (MQ=255) cgcggcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggcaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTACATGCCGCGTGGCCTGGAATTATTGATTGCt < 2:28120‑M1/58‑1 (MQ=255) gcgcttctcaggcctgcacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCaaa > 1:851778‑M1/88‑149 (MQ=255) gcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCaaa < 2:948626‑M1/62‑1 (MQ=255) gcgcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCaaa > 1:211684‑M1/88‑149 (MQ=255) gcttctcaggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAAcc < 1:176878‑M1/64‑1 (MQ=255) aggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATtctc > 2:27005‑M1/79‑85 (MQ=255) aggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCTGCGTGGCCTGGAATTATTGATTGCTTAAGCCATTTTGc < 1:123304‑M1/71‑1 (MQ=255) aggcctacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACAATTTTGc < 2:464267‑M1/71‑1 (MQ=255) tacacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTg < 1:665509‑M1/70‑1 (MQ=255) cacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAAc > 1:76844‑M1/72‑134 (MQ=255) cacaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAAc < 2:76844‑M1/63‑1 (MQ=255) acaacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTc < 1:497641‑M1/79‑1 (MQ=255) acaacacatcgcaatgtattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCCCCTGATGAGGGCGCTAAATGCCGCGTGGCCCGGAATTATTGATTGCTCAACCCATTTTGCAAGgctcc < 2:542074‑M1/79‑3 (MQ=255) aacacatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatctggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCAtt > 1:261667‑M1/69‑135 (MQ=255) aacacatcgcaatttattgaatttgcagattatggaagaccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGa < 2:877922‑M1/81‑1 (MQ=255) cgcgTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGAt < 2:399259/149‑1 (MQ=255) cacatcgcaatttattgaatttgcagattatggaaggccggaaaaggcgttttcgccccatacgacAAATCTCTGCTCCTGCTGAGGGCGCTAAATGCCGCGTGGCCTTGAATTATGAATTGCTCCAACCATTTTGCAAGGCttcgctg < 2:367005‑M1/83‑4 (MQ=255) acatcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGc < 2:978088‑M1/84‑1 (MQ=255) atcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCGAAATGCCGCGTCGCCTGGAATGATTAATTGCTCACACCATTTTGCAAGGcttcgagtctg < 2:386536‑M1/86‑6 (MQ=255) tcgcaatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCa < 1:159627‑M1/87‑1 (MQ=255) caatttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatcgggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTa > 2:703498‑M1/60‑149 (MQ=255) tttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATgg > 2:895294‑M1/57‑149 (MQ=255) ttattgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGt > 2:562360‑M1/56‑149 (MQ=255) attgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCg < 1:65044‑M1/96‑1 (MQ=255) ttgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGa < 2:686741‑M1/97‑1 (MQ=255) ttgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGa < 2:331185‑M1/97‑1 (MQ=255) tgaatttgcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGAt > 1:717499‑M1/52‑149 (MQ=255) gcagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCAtttt < 2:522001‑M1/69‑1 (MQ=255) cagattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGaa > 2:660858‑M1/44‑149 (MQ=255) agattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAg > 2:755971‑M1/43‑149 (MQ=255) agattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAg < 2:236443‑M1/107‑1 (MQ=255) gattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCaa > 1:640171‑M1/42‑102 (MQ=255) gattatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCaa < 2:640171‑M1/61‑1 (MQ=255) agttatggaaggccggataaggcggtgtcgccgcattcggcAATTCTTTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGt > 2:136399‑M1/42‑149 (MQ=255) attatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTg < 1:898345‑M1/109‑1 (MQ=255) ttatggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGc > 1:428005‑M1/40‑79 (MQ=255) ggaaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAg > 2:795114‑M1/36‑109 (MQ=255) aaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCg < 2:303245‑M1/116‑1 (MQ=255) aaggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCg > 1:683318‑M1/34‑149 (MQ=255) aggccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGCATTATTGATTGATCAAACCATTTTGCAAGCCTCCGATGCTAAGTATGGTCGATTCCTCGAAGTGAGCTCCgg > 2:344652‑M1/33‑149 (MQ=255) gccggataaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTg > 2:2060‑M1/31‑149 (MQ=255) gccggATAAGGCGTTCTCGCCGAATCCGGCAATTCACTCCCTCTGATGGGGGCGCTAAATGCCGCGTCAATGCGAATGATTGCCAGCGCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTg < 1:738900/146‑1 (MQ=255) gacggataaggcgttttggccccatgcggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTg > 2:731554‑M1/31‑149 (MQ=255) ccgaagaaGGCGTTTTCGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTgc > 2:624212/7‑149 (MQ=255) cggataagtcgttgtcgccgcatccggcAATTCTCTGCTCCTGATGAGTGCTCTAAATGCCGCGTGTCCTGGAATTATTGATTGCTCAAACCATTTGGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTgcg > 1:882909‑M1/29‑149 (MQ=255) gATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCgca > 2:414449/1‑149 (MQ=255) aaggcgttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCgcagca > 2:197638‑M1/24‑149 (MQ=255) gttttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGtt > 1:249467‑M1/19‑149 (MQ=255) ttttcgccgcatccggcAATTCGCTGCTCCTTATGAGGTCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGttt > 2:781292‑M1/18‑149 (MQ=255) tttcgccgcttcaggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTc > 1:362848‑M1/17‑149 (MQ=255) tttcgccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTc > 1:10471‑M1/17‑149 (MQ=255) tctcgccgcatccggcAATTCCCTGCCCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTc > 1:30748‑M1/17‑149 (MQ=255) cgccgcatccggcAATGCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGaa > 1:417896‑M1/14‑149 (MQ=255) gccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTc < 1:931388‑M1/100‑1 (MQ=255) gccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAAc < 1:142583‑M1/137‑1 (MQ=255) gccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAAc < 1:838244‑M1/137‑1 (MQ=255) ccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACa < 1:350363‑M1/138‑1 (MQ=255) ccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACa > 2:862897‑M1/12‑149 (MQ=255) ccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACa < 2:257440‑M1/138‑1 (MQ=255) ccgcatccggcAATTCTCTGCTCCTGATGAGGGCGCTAAACGCCGCGTGGTCTGGAATTATTGATTGCTCAAACCATTCTGCAAGGCTTCGATGCACAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACa > 2:912180‑M1/12‑149 (MQ=255) ccgcagccggcAATTCTCAGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACa > 1:620401‑M1/12‑149 (MQ=255) cggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCaa > 2:215250‑M1/5‑77 (MQ=255) cggcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGAc < 2:931484‑M1/145‑1 (MQ=255) gcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTg > 2:838244‑M1/3‑149 (MQ=255) gcAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTg < 1:581335‑M1/147‑1 (MQ=255) | ACAACCGTTGCTGACTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAATCGGTGCACGATGCCTGATGCGACGCTTGCGCGTCTTATCATGCCTACAGCCGTTGCCGAACGTAGGCTGGATAAGGCGTTTACGCCGCATCCGGCAATTCTCTGCTCCTGATGAGGGCGCTAAATGCCGCGTGGCCTGGAATTATTGATTGCTCAAACCATTTTGCAAGGCTTCGATGCTCAGTATGGTCGATTCCTCGAAGTGACCTCCGGTGCGCAGCAGCGTTTCGAACAGGCCGACTGGC > NC_000913_3_hsa_pgi/4218420‑4218716 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |